RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 LMNAP02545 664 aaKnown RBP6.52□□□□□ -1.37
SMAD4-203ENST00000585448 ITGA2BP08514 1039 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 GOLGA8HP0CJ92 632 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 PTPN2P17706 415 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 KRT4P19013 534 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 IL4RP24394 825 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 NFKBIAP25963 317 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 CASP14P31944 242 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 HALP42357 657 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 EPHB4P54760 987 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 ADARP55265 1226 aaKnown RBP6.52□□□□□ -1.37
SMAD4-203ENST00000585448 HTRA3P83110 453 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 MCL1Q07820 350 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 KPNB1Q14974 876 aaKnown RBP6.52□□□□□ -1.37
SMAD4-203ENST00000585448 NONOQ15233 471 aaKnown RBP eCLIP6.52□□□□□ -1.37
SMAD4-203ENST00000585448 ZNF385BQ569K4 471 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 DEPDC1Q5TB30 811 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 SYDE2Q5VT97 1194 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 AGAP9Q5VTM2 703 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 DAB2IPQ5VWQ8 1189 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 C16orf86Q6ZW13 317 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 PNMA8AQ86V59 439 aaPredicted RBP6.52□□□□□ -1.37
SMAD4-203ENST00000585448 FAM129CQ86XR2 697 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 TMEM139Q8IV31 216 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 PASD1Q8IV76 773 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 CLASRPQ8N2M8 674 aaKnown RBP6.52□□□□□ -1.37
SMAD4-203ENST00000585448 CCDC197Q8NCU1 140 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 SUN5Q8TC36 379 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 RIN2Q8WYP3 895 aaPredicted RBP6.52□□□□□ -1.37
SMAD4-203ENST00000585448 FBXW5Q969U6 566 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 VMP1Q96GC9 406 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 SCLYQ96I15 445 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 MAGEB10Q96LZ2 347 aaPredicted RBP6.52□□□□□ -1.37
SMAD4-203ENST00000585448 CCDC42Q96M95 316 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 RAB3IPQ96QF0 476 aaPredicted RBP6.52□□□□□ -1.37
SMAD4-203ENST00000585448 SEC62Q99442 399 aaKnown RBP6.52□□□□□ -1.37
SMAD4-203ENST00000585448 JAM3Q9BX67 310 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 CELF4Q9BZC1 486 aaKnown RBP6.52□□□□□ -1.37
SMAD4-203ENST00000585448 RXFP1Q9HBX9 757 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 EPB41L4AQ9HCS5 686 aaPredicted RBP6.52□□□□□ -1.37
SMAD4-203ENST00000585448 PFDN4Q9NQP4 134 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 INIPQ9NRY2 104 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 INTS7Q9NVH2 962 aaKnown RBP6.52□□□□□ -1.37
SMAD4-203ENST00000585448 FAIMQ9NVQ4 179 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 EURLQ9NYK6 297 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 DTLQ9NZJ0 730 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 DLGAP2Q9P1A6 1054 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 CHPF2Q9P2E5 772 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 MYOTQ9UBF9 498 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 NDOR1Q9UHB4 597 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 ZNF180Q9UJW8 692 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 DSEQ9UL01 958 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 NOB1Q9ULX3 412 aaKnown RBP6.52□□□□□ -1.37
SMAD4-203ENST00000585448 PLA2G2DQ9UNK4 145 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 RPL26L1Q9UNX3 145 aaKnown RBP6.52□□□□□ -1.37
SMAD4-203ENST00000585448 CHMP2BQ9UQN3 213 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 LRCH1Q9Y2L9 728 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 FAM32AQ9Y421 112 aaKnown RBP6.52□□□□□ -1.37
SMAD4-203ENST00000585448 PCDHB4Q9Y5E5 795 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 PCDHA8Q9Y5H6 950 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 KIAA0232Q92628 1395 aa6.52□□□□□ -1.37
SMAD4-203ENST00000585448 POGZQ7Z3K3 1410 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-203ENST00000585448 HNRNPRO43390 633 aaKnown RBP6.51□□□□□ -1.37
SMAD4-203ENST00000585448 TRAPPC3O43617 180 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 TSPAN1O60635 241 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 MAP4K4O95819 1239 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-203ENST00000585448 KRT14P02533 472 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 CHGBP05060 677 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 ZFYP08048 801 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-203ENST00000585448 ATF2P15336 505 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 EIF2S2P20042 333 aaKnown RBP6.51□□□□□ -1.37
SMAD4-203ENST00000585448 GJB2P29033 226 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 HSPA9P38646 679 aaKnown RBP6.51□□□□□ -1.37
SMAD4-203ENST00000585448 PEX5P50542 639 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 PDE6CP51160 858 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 COX10Q12887 443 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 TBX2Q13207 712 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-203ENST00000585448 RASA2Q15283 850 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 ZNF124Q15973 351 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 P3H1Q32P28 736 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 CNPY1Q3B7I2 92 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 FAM47CQ5HY64 1035 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 SYCP2LQ5T4T6 812 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 IL23RQ5VWK5 629 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 SPECC1LQ69YQ0 1117 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 GRAMD2AQ8IUY3 354 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 TMEM151BQ8IW70 566 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.51□□□□□ -1.37
SMAD4-203ENST00000585448 SAMD14Q8IZD0 417 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-203ENST00000585448 NLGN1Q8N2Q7 840 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 PIP4K2CQ8TBX8 421 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.51□□□□□ -1.37
SMAD4-203ENST00000585448 GPR101Q96P66 508 aaPredicted RBP6.51□□□□□ -1.37
SMAD4-203ENST00000585448 RPS6KC1Q96S38 1066 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 SLF1Q9BQI6 1058 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 HGH1Q9BTY7 390 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 SPATA16Q9BXB7 569 aa6.51□□□□□ -1.37
SMAD4-203ENST00000585448 SAMSN1Q9NSI8 373 aaKnown RBP6.51□□□□□ -1.37
SMAD4-203ENST00000585448 PANK4Q9NVE7 773 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms