RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 LAMP2P13473 410 aa21.57■■□□□ 1.04
SS18-218ENST00000581021 ALADP13716 330 aa21.57■■□□□ 1.04
SS18-218ENST00000581021 CEBPBP17676 345 aa21.57■■□□□ 1.04
SS18-218ENST00000581021 ATF6P18850 670 aa21.57■■□□□ 1.04
SS18-218ENST00000581021 WARSP23381 471 aaKnown RBP21.57■■□□□ 1.04
SS18-218ENST00000581021 RPL13P26373 211 aaKnown RBP21.57■■□□□ 1.04
SS18-218ENST00000581021 GCLMP48507 274 aa21.57■■□□□ 1.04
SS18-218ENST00000581021 AP3M2P53677 418 aa21.57■■□□□ 1.04
SS18-218ENST00000581021 TRPC3Q13507 836 aa21.57■■□□□ 1.04
SS18-218ENST00000581021 WDR72Q3MJ13 1102 aa21.57■■□□□ 1.04
SS18-218ENST00000581021 INTS8Q75QN2 995 aaKnown RBP21.57■■□□□ 1.04
SS18-218ENST00000581021 NPAS3Q8IXF0 933 aa21.57■■□□□ 1.04
SS18-218ENST00000581021 SPATA18Q8TC71 538 aa21.57■■□□□ 1.04
SS18-218ENST00000581021 RSAD2Q8WXG1 361 aa21.57■■□□□ 1.04
SS18-218ENST00000581021 FGF13Q92913 245 aa21.57■■□□□ 1.04
SS18-218ENST00000581021 ACBD6Q9BR61 282 aa21.57■■□□□ 1.04
SS18-218ENST00000581021 LRRC3Q9BY71 257 aa21.57■■□□□ 1.04
SS18-218ENST00000581021 SDCBP2Q9H190 292 aa21.57■■□□□ 1.04
SS18-218ENST00000581021 SMYD3Q9H7B4 428 aa21.57■■□□□ 1.04
SS18-218ENST00000581021 VRTNQ9H8Y1 702 aa21.57■■□□□ 1.04
SS18-218ENST00000581021 LMBRD1Q9NUN5 540 aa21.57■■□□□ 1.04
SS18-218ENST00000581021 R3HCC1Q9Y3T6 440 aaKnown RBP21.57■■□□□ 1.04
SS18-218ENST00000581021 MYBPHLA2RUH7 354 aa21.56■■□□□ 1.04
SS18-218ENST00000581021 IKBKBO14920 756 aa21.56■■□□□ 1.04
SS18-218ENST00000581021 PHACTR2O75167 634 aa21.56■■□□□ 1.04
SS18-218ENST00000581021 LRRN2O75325 713 aa21.56■■□□□ 1.04
SS18-218ENST00000581021 MOSPD3O75425 235 aa21.56■■□□□ 1.04
SS18-218ENST00000581021 PSMC1P62191 440 aaKnown RBP21.56■■□□□ 1.04
SS18-218ENST00000581021 ZXDAP98168 799 aa21.56■■□□□ 1.04
SS18-218ENST00000581021 DPH6Q7L8W6 267 aa21.56■■□□□ 1.04
SS18-218ENST00000581021 TMC8Q8IU68 726 aa21.56■■□□□ 1.04
SS18-218ENST00000581021 PLCD3Q8N3E9 789 aa21.56■■□□□ 1.04
SS18-218ENST00000581021 MMS19Q96T76 1030 aa21.56■■□□□ 1.04
SS18-218ENST00000581021 SEPT5Q99719 369 aaPredicted RBP21.56■■□□□ 1.04
SS18-218ENST00000581021 DUSP9Q99956 384 aaKnown RBP21.56■■□□□ 1.04
SS18-218ENST00000581021 LPIN3Q9BQK8 851 aa21.56■■□□□ 1.04
SS18-218ENST00000581021 MKNK1Q9BUB5 465 aa21.56■■□□□ 1.04
SS18-218ENST00000581021 KCNK12Q9HB15 430 aa21.56■■□□□ 1.04
SS18-218ENST00000581021 CRTAC1Q9NQ79 661 aa21.56■■□□□ 1.04
SS18-218ENST00000581021 AVENQ9NQS1 362 aaPredicted RBP21.56■■□□□ 1.04
SS18-218ENST00000581021 ABI2Q9NYB9 513 aaPredicted RBP21.56■■□□□ 1.04
SS18-218ENST00000581021 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.56■■□□□ 1.04
SS18-218ENST00000581021 NXF1Q9UBU9 619 aaKnown RBP21.56■■□□□ 1.04
SS18-218ENST00000581021 CDH7Q9ULB5 785 aa21.56■■□□□ 1.04
SS18-218ENST00000581021 MYO10Q9HD67 2058 aa21.56■■□□□ 1.04
SS18-218ENST00000581021 HLA-DRAP01903 254 aa21.55■■□□□ 1.04
SS18-218ENST00000581021 PTPN2P17706 415 aa21.55■■□□□ 1.04
SS18-218ENST00000581021 CCNE1P24864 410 aa21.55■■□□□ 1.04
SS18-218ENST00000581021 ATICP31939 592 aa21.55■■□□□ 1.04
SS18-218ENST00000581021 RAP1GAPP47736 663 aa21.55■■□□□ 1.04
SS18-218ENST00000581021 LHX1P48742 406 aa21.55■■□□□ 1.04
SS18-218ENST00000581021 GPR15P49685 360 aa21.55■■□□□ 1.04
SS18-218ENST00000581021 EPHA5P54756 1037 aa21.55■■□□□ 1.04
SS18-218ENST00000581021 MYL7Q01449 175 aa21.55■■□□□ 1.04
SS18-218ENST00000581021 TSPY1Q01534 308 aa21.55■■□□□ 1.04
SS18-218ENST00000581021 LRRC63Q05C16 580 aa21.55■■□□□ 1.04
SS18-218ENST00000581021 HTR4Q13639 388 aa21.55■■□□□ 1.04
SS18-218ENST00000581021 ZNF699Q32M78 642 aa21.55■■□□□ 1.04
SS18-218ENST00000581021 SPOPLQ6IQ16 392 aa21.55■■□□□ 1.04
SS18-218ENST00000581021 KLHL10Q6JEL2 608 aa21.55■■□□□ 1.04
SS18-218ENST00000581021 TTI2Q6NXR4 508 aa21.55■■□□□ 1.04
SS18-218ENST00000581021 TAS1R2Q8TE23 839 aa21.55■■□□□ 1.04
SS18-218ENST00000581021 EDAQ92838 391 aa21.55■■□□□ 1.04
SS18-218ENST00000581021 SYAP1Q96A49 352 aaPredicted RBP21.55■■□□□ 1.04
SS18-218ENST00000581021 CLSTN2Q9H4D0 955 aa21.55■■□□□ 1.04
SS18-218ENST00000581021 ZNF334Q9HCZ1 680 aaPredicted RBP21.55■■□□□ 1.04
SS18-218ENST00000581021 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.55■■□□□ 1.046e-16■■■■■ 187.5
SS18-218ENST00000581021 HSFX1Q9UBD0 423 aa21.55■■□□□ 1.04
SS18-218ENST00000581021 GTF3C4Q9UKN8 822 aa21.55■■□□□ 1.04
SS18-218ENST00000581021 MRPS23Q9Y3D9 190 aaKnown RBP21.55■■□□□ 1.04
SS18-218ENST00000581021 ANHXE9PGG2 379 aa21.54■■□□□ 1.04
SS18-218ENST00000581021 PSMA7O14818 248 aa21.54■■□□□ 1.04
SS18-218ENST00000581021 CETN3O15182 167 aa21.54■■□□□ 1.04
SS18-218ENST00000581021 TACC1O75410 805 aa21.54■■□□□ 1.04
SS18-218ENST00000581021 ASS1P00966 412 aaKnown RBP21.54■■□□□ 1.04
SS18-218ENST00000581021 HAPLN1P10915 354 aaPredicted RBP21.54■■□□□ 1.04
SS18-218ENST00000581021 CDH8P55286 799 aa21.54■■□□□ 1.04
SS18-218ENST00000581021 TNNC1P63316 161 aa21.54■■□□□ 1.04
SS18-218ENST00000581021 ENPEPQ07075 957 aa21.54■■□□□ 1.04
SS18-218ENST00000581021 FAM171BQ6P995 826 aa21.54■■□□□ 1.04
SS18-218ENST00000581021 SCARA5Q6ZMJ2 495 aa21.54■■□□□ 1.04
SS18-218ENST00000581021 DCP1BQ8IZD4 617 aaKnown RBP21.54■■□□□ 1.04
SS18-218ENST00000581021 STKLD1Q8NE28 680 aa21.54■■□□□ 1.04
SS18-218ENST00000581021 DHTKD1Q96HY7 919 aaPredicted RBP21.54■■□□□ 1.04
SS18-218ENST00000581021 TSG101Q99816 390 aa21.54■■□□□ 1.04
SS18-218ENST00000581021 SYT15Q9BQS2 421 aa21.54■■□□□ 1.04
SS18-218ENST00000581021 PI4K2AQ9BTU6 479 aa21.54■■□□□ 1.04
SS18-218ENST00000581021 RPP25Q9BUL9 199 aaKnown RBP21.54■■□□□ 1.04
SS18-218ENST00000581021 GTPBP4Q9BZE4 634 aaKnown RBP21.54■■□□□ 1.04
SS18-218ENST00000581021 DPEP3Q9H4B8 488 aa21.54■■□□□ 1.04
SS18-218ENST00000581021 MMRN2Q9H8L6 949 aa21.54■■□□□ 1.04
SS18-218ENST00000581021 APOBEC3GQ9HC16 384 aaKnown RBP21.54■■□□□ 1.04
SS18-218ENST00000581021 KIAA1468Q9P260 1216 aa21.54■■□□□ 1.04
SS18-218ENST00000581021 SORCS3Q9UPU3 1222 aa21.54■■□□□ 1.04
SS18-218ENST00000581021 CTNND2Q9UQB3 1225 aa21.54■■□□□ 1.04
SS18-218ENST00000581021 SLC16A3O15427 465 aaKnown RBP21.53■■□□□ 1.04
SS18-218ENST00000581021 PDGFRBP09619 1106 aa21.53■■□□□ 1.04
SS18-218ENST00000581021 KRT13P13646 458 aa21.53■■□□□ 1.04
SS18-218ENST00000581021 GJA1P17302 382 aa21.53■■□□□ 1.04
SS18-218ENST00000581021 PCSK1P29120 753 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms