RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 TCRBV7S2A1N4TA0A589 114 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 FAM187AA6NFU0 413 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 VIMP08670 466 aaKnown RBP5.7□□□□□ -1.5
VAPA-203ENST00000577539 MAPK4P31152 587 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 CHRNA3P32297 505 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 NFX1Q12986 1120 aaKnown RBP5.7□□□□□ -1.5
VAPA-203ENST00000577539 NFIL3Q16649 462 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 DDR2Q16832 855 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 MTERF2Q49AM1 385 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 CCDC38Q502W7 563 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 TTC39BQ5VTQ0 682 aaPredicted RBP5.7□□□□□ -1.5
VAPA-203ENST00000577539 PRAMEF18Q5VWM3 479 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 SWSAP1Q6NVH7 229 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 CYFIP1Q7L576 1253 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 PRICKLE2Q7Z3G6 844 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 USP37Q86T82 979 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 PRELID2Q8N945 189 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 FBXL13Q8NEE6 735 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 LMO3Q8TAP4 145 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 ATG4CQ96DT6 458 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 CYFIP2Q96F07 1278 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 HEMGNQ9BXL5 484 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 SEMA4AQ9H3S1 761 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 RNF146Q9NTX7 359 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 TBX20Q9UMR3 447 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 NENFQ9UMX5 172 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 GJA3Q9Y6H8 435 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 LY75O60449 1722 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 GSTTP1A0A1W2PQM5 241 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 WNT10BO00744 389 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 DHX15O43143 795 aaKnown RBP5.7□□□□□ -1.5
VAPA-203ENST00000577539 ACSL3O95573 720 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 FAM107AO95990 144 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 CYP11B1P15538 503 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 RPL21P46778 160 aaKnown RBP5.7□□□□□ -1.5
VAPA-203ENST00000577539 LIG4P49917 911 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 RWDD2BP57060 319 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 CXCL9Q07325 125 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 PRKG1Q13976 671 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 DHX34Q14147 1143 aaKnown RBP5.7□□□□□ -1.5
VAPA-203ENST00000577539 SGO2Q562F6 1265 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 CCDC81Q6ZN84 652 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 OTUD6AQ7L8S5 288 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 PASD1Q8IV76 773 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 RTKN2Q8IZC4 609 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 CACNA2D3Q8IZS8 1091 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 ATP8B4Q8TF62 1192 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 CLEC4DQ8WXI8 215 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 RAPGEF5Q92565 580 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 IFT74Q96LB3 600 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 FAM118BQ9BPY3 351 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 PDCD2LQ9BRP1 358 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 TSEN34Q9BSV6 310 aaKnown RBP5.7□□□□□ -1.5
VAPA-203ENST00000577539 PLVAPQ9BX97 442 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 PDGFDQ9GZP0 370 aaPredicted RBP5.7□□□□□ -1.5
VAPA-203ENST00000577539 RPAP3Q9H6T3 665 aaPredicted RBP5.7□□□□□ -1.5
VAPA-203ENST00000577539 LRRC4CQ9HCJ2 640 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 C1orf112Q9NSG2 853 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 RAB20Q9NX57 234 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 FBXO9Q9UK97 447 aaPredicted RBP5.7□□□□□ -1.5
VAPA-203ENST00000577539 PFASO15067 1338 aa5.7□□□□□ -1.5
VAPA-203ENST00000577539 ASTN2O75129 1339 aaPredicted RBP5.7□□□□□ -1.5
VAPA-203ENST00000577539 H0YGN5 161 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 KIAA0391O15091 583 aaKnown RBP5.69□□□□□ -1.5
VAPA-203ENST00000577539 WDR46O15213 610 aaKnown RBP5.69□□□□□ -1.5
VAPA-203ENST00000577539 P4HA2O15460 535 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 DNAJA2O60884 412 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 ECEL1O95672 775 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 CCNE2O96020 404 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 AVPP01185 164 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 DPEP1P16444 411 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 HSPA6P17066 643 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 VCAM1P19320 739 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 HSD17B4P51659 736 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 JAK3P52333 1124 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 EIF3BP55884 814 aaKnown RBP5.69□□□□□ -1.5
VAPA-203ENST00000577539 FCGRTP55899 365 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 KRT76Q01546 638 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 ZNF252P-AS1Q0IIN9 211 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 CCDC85BQ15834 202 aaPredicted RBP5.69□□□□□ -1.5
VAPA-203ENST00000577539 AGBL2Q5U5Z8 902 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 DUPD1Q68J44 220 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 SV2AQ7L0J3 742 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 SLC13A5Q86YT5 568 aaPredicted RBP5.69□□□□□ -1.5
VAPA-203ENST00000577539 EIF1ADQ8N9N8 165 aaKnown RBP5.69□□□□□ -1.5
VAPA-203ENST00000577539 PARD3BQ8TEW8 1205 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 CPA5Q8WXQ8 436 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 ATG4AQ8WYN0 398 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 NXPE3Q969Y0 559 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 KCNK9Q9NPC2 374 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 BRD7Q9NPI1 651 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 DBR1Q9UK59 544 aaKnown RBP5.69□□□□□ -1.5
VAPA-203ENST00000577539 ZNRF3Q9ULT6 936 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 SYNPO2Q9UMS6 1093 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 FZD1Q9UP38 647 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 UBIAD1Q9Y5Z9 338 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 NFS1Q9Y697 457 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 ZNF536O15090 1300 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 PASKQ96RG2 1323 aa5.69□□□□□ -1.5
VAPA-203ENST00000577539 ARFGEF1Q9Y6D6 1849 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms