RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 P4HA2O15460 535 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 MBTPS2O43462 519 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 ATP2C2O75185 946 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 AFPP02771 609 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 C8AP07357 584 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 WEE2P0C1S8 567 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 BMP1P13497 986 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 P4HA1P13674 534 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 ELF1P32519 619 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 MTIF2P46199 727 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 RAP1GAPP47736 663 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 CDR1P51861 262 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 NOP14P78316 857 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 ITIH3Q06033 890 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 SMAD4Q13485 552 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 NCAPHQ15003 741 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 ZSCAN23Q3MJ62 389 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 SLC39A12Q504Y0 691 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 WDR44Q5JSH3 913 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 CDKAL1Q5VV42 579 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 PTCRAQ6ISU1 281 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 FAM171BQ6P995 826 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 ELMSAN1Q6PJG2 1045 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 RTL10Q7L3V2 364 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 FAM114A1Q8IWE2 563 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 TCEAL8Q8IYN2 117 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 DCP1BQ8IZD4 617 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 ATAD1Q8NBU5 361 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 CCDC150Q8NCX0 1101 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 CMASQ8NFW8 434 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 OR6B3Q8NGW1 331 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 SLC7A14Q8TBB6 771 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 SUSD6Q92537 303 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 ZNF707Q96C28 371 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 PGLYRP2Q96PD5 576 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 PKMYT1Q99640 499 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 BCO2Q9BYV7 579 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 IMPG2Q9BZV3 1241 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 CRISPLD1Q9H336 500 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 SNX25Q9H3E2 840 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 SFXN1Q9H9B4 322 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 CYP4F11Q9HBI6 524 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 CDH22Q9UJ99 828 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 GTF3C4Q9UKN8 822 aa12.78□□□□□ -0.36
RABGGTA-218ENST00000560777 MYBPHLA2RUH7 354 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 MTMR11A4FU01 709 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 KCNJ18B7U540 433 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 N4BP1O75113 896 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 CLSTN1O94985 981 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 PCSK1P29120 753 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 TSPY1Q01534 308 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 MYL5Q02045 173 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 SMARCB1Q12824 385 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 DUSP4Q13115 394 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 KCNJ12Q14500 433 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 PUS10Q3MIT2 529 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 TCP11X2Q5H9J9 407 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 INTS6LQ5JSJ4 861 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 PPM1LQ5SGD2 360 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 LIN9Q5TKA1 542 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 SCARA5Q6ZMJ2 495 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 CCDC149Q6ZUS6 474 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 GPR149Q86SP6 731 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 EHBP1Q8NDI1 1231 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 FAXDC2Q96IV6 333 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 BPIFA3Q9BQP9 254 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 TUBGCP2Q9BSJ2 902 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 PRKD2Q9BZL6 878 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 NIF3L1Q9GZT8 377 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 NAT10Q9H0A0 1025 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 HSD3B7Q9H2F3 369 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 CYP3A43Q9HB55 503 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 CRTAC1Q9NQ79 661 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 ZDHHC7Q9NXF8 308 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 MAGEC2Q9UBF1 373 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 CDH9Q9ULB4 789 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 SLC27A5Q9Y2P5 690 aa12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 USP15Q9Y4E8 981 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-218ENST00000560777 A8MXQ7 604 aa12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 PRRG1O14668 218 aa12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 HNRNPA1P09651 372 aaKnown RBP eCLIP12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 IL9P15248 144 aa12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 PTPN1P18031 435 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 EEF1GP26641 437 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 HOXA9P31269 272 aa12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 PSMC1P62191 440 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 CETN1Q12798 172 aa12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 LRMPQ12912 555 aa12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 SMAD2Q15796 467 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 MAN2A1Q16706 1144 aa12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 CCDC142Q17RM4 750 aa12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 VWA3BQ502W6 1294 aa12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 MIIPQ5JXC2 388 aa12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 ATAT1Q5SQI0 421 aa12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 CES5AQ6NT32 575 aa12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 TTC9BQ8N6N2 239 aa12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 C2orf15Q8WU43 125 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 LPIN3Q9BQK8 851 aa12.76□□□□□ -0.37
RABGGTA-218ENST00000560777 SYT15Q9BQS2 421 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms