RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 CYP11B1P15538 503 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 ANXA13P27216 316 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 TAF6P49848 677 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 PDE6CP51160 858 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 CLCNKBP51801 687 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 RAD23BP54727 409 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 LILRA4P59901 499 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 TNNC1P63316 161 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 DSC1Q08554 894 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 INCA1Q0VD86 236 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 MYO1EQ12965 1108 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 ORC1Q13415 861 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 BMS1Q14692 1282 aaKnown RBP8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 UPP1Q16831 310 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 SOWAHAQ2M3V2 549 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 NOMO2Q5JPE7 1267 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 TAF3Q5VWG9 929 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 MFSD5Q6N075 450 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 GLB1LQ6UWU2 654 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 FAM43BQ6ZT52 329 aaPredicted RBP8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 ZNF280BQ86YH2 543 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 NPAS4Q8IUM7 802 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 GLYCTKQ8IVS8 523 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 RPUSD2Q8IZ73 545 aaKnown RBP8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 KBTBD7Q8WVZ9 684 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 CASD1Q96PB1 797 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 PCDHB18PQ96TA0 734 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 AGPAT1Q99943 283 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 MRPL45Q9BRJ2 306 aaKnown RBP8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 ELOVL4Q9GZR5 314 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 DEF6Q9H4E7 631 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 CYP3A43Q9HB55 503 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 TBC1D13Q9NVG8 400 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 GDAP2Q9NXN4 497 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 TAS2R14Q9NYV8 317 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 TRIM10Q9UDY6 481 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 ADAMTS1Q9UHI8 967 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 NAGPAQ9UK23 515 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 L1RE1Q9UN81 338 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 SLC27A5Q9Y2P5 690 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 SNX9Q9Y5X1 595 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 PTPRDP23468 1912 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 NLRC5Q86WI3 1866 aa8.64□□□□□ -1.03
DEPDC4-207ENST00000549249 FAM170AA1A519 330 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 KPNA7A9QM74 516 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 F8W810 466 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 HCRTO43612 131 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 S1PR4O95977 384 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 CCDC172P0C7W6 258 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 P4HA1P13674 534 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 RAG1P15918 1043 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 TNFAIP3P21580 790 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 BRD2P25440 801 aaKnown RBP8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 GNA15P30679 374 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 SSTR3P32745 418 aaPredicted RBP8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 PNPLA4P41247 253 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 AARSP49588 968 aaKnown RBP eCLIP8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 VAV2P52735 878 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 YWHAEP62258 255 aaKnown RBP8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 DEFB103AP81534 67 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 CDR2Q01850 454 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 TUSC3Q13454 348 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 SV2CQ496J9 727 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 ZNF394Q53GI3 561 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 OSTM1Q86WC4 334 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 COLGALT2Q8IYK4 626 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 C7orf61Q8IZ16 206 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 SLC4A11Q8NBS3 891 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 TFAP2BQ92481 460 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 MMS19Q96T76 1030 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 PACSIN1Q9BY11 444 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 LACRTQ9GZZ8 138 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 PRO3102Q9H379 93 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 DNAJB4Q9UDY4 337 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 R3HCC1Q9Y3T6 440 aaKnown RBP8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 PCDHB7Q9Y5E2 793 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 PCDHA13Q9Y5I0 950 aa8.63□□□□□ -1.03
DEPDC4-207ENST00000549249 PJA2O43164 708 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 ZSCAN12O43309 604 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 THAP12O43422 761 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 KIF4AO95239 1232 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 CYP1A1P04798 512 aaPredicted RBP8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 ITGB1P05556 798 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 PAEPP09466 180 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 ACRP10323 421 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 RPL9P32969 192 aaKnown RBP8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 BMP8BP34820 402 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 SLC19A1P41440 591 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 BRCC3P46736 316 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 NDST1P52848 882 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 KRT83P78385 493 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 IKBKEQ14164 716 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 PAN2Q504Q3 1202 aaKnown RBP8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 TIGD5Q53EQ6 642 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 CCDC122Q5T0U0 273 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 ALKBH5Q6P6C2 394 aaKnown RBP8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 ZNF662Q6ZS27 426 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 C16orf59Q7L2K0 433 aa8.62□□□□□ -1.03
DEPDC4-207ENST00000549249 ZNF677Q86XU0 584 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms