RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 SPTY2D1Q68D10 685 aaPredicted RBP2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 DHRS13Q6UX07 377 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 Q6ZS52 159 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 RABEPKQ7Z6M1 372 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 TEX11Q8IYF3 940 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 SPICE1Q8N0Z3 855 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 CPXCR1Q8N123 301 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 VPS52Q8N1B4 723 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 ENGASEQ8NFI3 743 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 HDAC7Q8WUI4 952 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 KAT2BQ92831 832 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 ATP6V0A1Q93050 837 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 MIB2Q96AX9 1013 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 HDAC11Q96DB2 347 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 MSANTD3Q96H12 275 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 INTS4Q96HW7 963 aaKnown RBP2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 SIGLEC10Q96LC7 697 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 ZNF578Q96N58 590 aaPredicted RBP2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 FRMD6Q96NE9 622 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 KXD1Q9BQD3 176 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 LZTS2Q9BRK4 669 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 TTPALQ9BTX7 342 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 TMEM245Q9H330 911 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 DNAJC18Q9H819 358 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 BRD9Q9H8M2 597 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 TRPV5Q9NQA5 729 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 RBM12Q9NTZ6 932 aaKnown RBP2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 GNL3LQ9NVN8 582 aaKnown RBP2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 C19orf73Q9NVV2 129 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 C2orf42Q9NWW7 574 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 GEMIN8Q9NWZ8 242 aaKnown RBP2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 VPS4AQ9UN37 437 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 ENTPD4Q9Y227 616 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 KCTD3Q9Y597 815 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 PIAS3Q9Y6X2 628 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 U3KQE9 123 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 MYH15Q9Y2K3 1946 aa2.59□□□□□ -1.99
TRAV1-1-201ENST00000542354 MYH3P11055 1940 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 MXRA5Q9NR99 2828 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 A0A1W2PRG0 241 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 PTPDC1A2A3K4 754 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 C17orf102A2RUQ5 167 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 SERINC4A6NH21 518 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 ATP2A1O14983 1001 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 TNFSF14O43557 240 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 ZBED4O75132 1171 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 ECI2O75521 394 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 SLITRK5O94991 958 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 IFIT1P09914 478 aaKnown RBP2.58□□□□□ -2
TRAV1-1-201ENST00000542354 RNF224P0DH78 156 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 TXNP10599 105 aaKnown RBP2.58□□□□□ -2
TRAV1-1-201ENST00000542354 CTSAP10619 480 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 GHRP10912 638 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 GNAT1P11488 350 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 SCG2P13521 617 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 TPP2P29144 1249 aaPredicted RBP2.58□□□□□ -2
TRAV1-1-201ENST00000542354 ARL4AP40617 200 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 POLGP54098 1239 aaPredicted RBP2.58□□□□□ -2
TRAV1-1-201ENST00000542354 YARSP54577 528 aaKnown RBP2.58□□□□□ -2
TRAV1-1-201ENST00000542354 EGR3Q06889 387 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 TARDBPQ13148 414 aaKnown RBP eCLIP2.58□□□□□ -2
TRAV1-1-201ENST00000542354 ARL13BQ3SXY8 428 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 SLC6A19Q695T7 634 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 ALG1LQ6GMV1 187 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 LMBR1LQ6UX01 489 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 FAM43BQ6ZT52 329 aaPredicted RBP2.58□□□□□ -2
TRAV1-1-201ENST00000542354 USP53Q70EK8 1073 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 SV2BQ7L1I2 683 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 LPCAT2Q7L5N7 544 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 RTN4RL1Q86UN2 441 aaPredicted RBP2.58□□□□□ -2
TRAV1-1-201ENST00000542354 HEATR4Q86WZ0 1026 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 ZNF280BQ86YH2 543 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 FAM114A1Q8IWE2 563 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 LSMEM2Q8N112 164 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 LRRC47Q8N1G4 583 aaKnown RBP2.58□□□□□ -2
TRAV1-1-201ENST00000542354 ARL14EPQ8N8R7 260 aaPredicted RBP2.58□□□□□ -2
TRAV1-1-201ENST00000542354 GLIS1Q8NBF1 620 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 REPS2Q8NFH8 660 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 OR2I1PQ8NGU4 316 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 EPS8L3Q8TE67 593 aaKnown RBP2.58□□□□□ -2
TRAV1-1-201ENST00000542354 SCFD2Q8WU76 684 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 FGF13Q92913 245 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 EXTL1Q92935 676 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 TMEM169Q96HH4 297 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 KCNC2Q96PR1 638 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 TRMT61BQ9BVS5 477 aaKnown RBP2.58□□□□□ -2
TRAV1-1-201ENST00000542354 APOL6Q9BWW8 343 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 GPR62Q9BZJ7 368 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 RNF32Q9H0A6 362 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 ZNF552Q9H707 407 aaPredicted RBP2.58□□□□□ -2
TRAV1-1-201ENST00000542354 CWH43Q9H720 699 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 SH2D4AQ9H788 454 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 EHMT1Q9H9B1 1298 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 MAN1C1Q9NR34 630 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 TMEM74BQ9NUR3 256 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 FBXO28Q9NVF7 368 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 BABAM1Q9NWV8 329 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 EBF1Q9UH73 591 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 SIPA1L1O43166 1804 aa2.58□□□□□ -2
TRAV1-1-201ENST00000542354 KIAA1671Q9BY89 1806 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms