RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 MAN1A1P33908 653 aa21.55■■□□□ 1.04
CDH5-202ENST00000539168 DNA2P51530 1060 aa21.55■■□□□ 1.04
CDH5-202ENST00000539168 MAMLD1Q13495 774 aa21.55■■□□□ 1.04
CDH5-202ENST00000539168 LCLAT1Q6UWP7 414 aa21.55■■□□□ 1.04
CDH5-202ENST00000539168 APPL2Q8NEU8 664 aa21.55■■□□□ 1.04
CDH5-202ENST00000539168 FEZF2Q8TBJ5 459 aa21.55■■□□□ 1.04
CDH5-202ENST00000539168 TWNKQ96RR1 684 aa21.55■■□□□ 1.04
CDH5-202ENST00000539168 PAK6Q9NQU5 681 aaPredicted RBP21.55■■□□□ 1.04
CDH5-202ENST00000539168 HUS1O60921 280 aa21.54■■□□□ 1.04
CDH5-202ENST00000539168 BFSP2Q13515 415 aa21.54■■□□□ 1.04
CDH5-202ENST00000539168 PPP2R5EQ16537 467 aa21.54■■□□□ 1.04
CDH5-202ENST00000539168 LIMS2Q7Z4I7 341 aa21.54■■□□□ 1.04
CDH5-202ENST00000539168 FTHL17Q9BXU8 183 aa21.54■■□□□ 1.04
CDH5-202ENST00000539168 TSPYL2Q9H2G4 693 aaPredicted RBP21.54■■□□□ 1.04
CDH5-202ENST00000539168 RSAD1Q9HA92 442 aa21.54■■□□□ 1.04
CDH5-202ENST00000539168 IP6K2Q9UHH9 426 aa21.54■■□□□ 1.04
CDH5-202ENST00000539168 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.54■■□□□ 1.04
CDH5-202ENST00000539168 TMEM110-MUSTN1A8MSY1 372 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 CCDC188H7C350 402 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 PPEF2O14830 753 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 H2AFXP16104 143 aaPredicted RBP21.53■■□□□ 1.04
CDH5-202ENST00000539168 HSPA6P17066 643 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 CTNNA1P35221 906 aaKnown RBP21.53■■□□□ 1.04
CDH5-202ENST00000539168 MLH1P40692 756 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 BRD3Q15059 726 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 SOWAHAQ2M3V2 549 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 DENND1BQ6P3S1 775 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 DNAJC24Q6P3W2 148 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 WDTC1Q8N5D0 677 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 NOA1Q8NC60 698 aaKnown RBP21.53■■□□□ 1.04
CDH5-202ENST00000539168 C3orf20Q8ND61 904 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 OR6B3Q8NGW1 331 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 DDX27Q96GQ7 796 aaKnown RBP21.53■■□□□ 1.04
CDH5-202ENST00000539168 GAD1Q99259 594 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 ADAM2Q99965 735 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 TRPV6Q9H1D0 765 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 SNX25Q9H3E2 840 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 PCDHA3Q9Y5H8 950 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 SCN1AP35498 2009 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 MICAL2O94851 1124 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 PROSCO94903 275 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 CDK7P50613 346 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 LILRA4P59901 499 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 SOX4Q06945 474 aaPredicted RBP21.53■■□□□ 1.04
CDH5-202ENST00000539168 ZNF268Q14587 947 aaPredicted RBP21.53■■□□□ 1.04
CDH5-202ENST00000539168 ARHGAP17Q68EM7 881 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 AGMOQ6ZNB7 445 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 CRYBG2Q8N1P7 616 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 PDCL2Q8N4E4 241 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 IPO4Q8TEX9 1081 aaKnown RBP21.53■■□□□ 1.04
CDH5-202ENST00000539168 SH3TC2Q8TF17 1288 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 CD101Q93033 1021 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 C18orf8Q96DM3 657 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 TNIP3Q96KP6 325 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 MRPL45Q9BRJ2 306 aaKnown RBP21.53■■□□□ 1.04
CDH5-202ENST00000539168 HMGXB4Q9UGU5 601 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 RAB21Q9UL25 225 aa21.53■■□□□ 1.04
CDH5-202ENST00000539168 ARL5CA6NH57 179 aa21.52■■□□□ 1.04
CDH5-202ENST00000539168 A8MXQ7 604 aa21.52■■□□□ 1.04
CDH5-202ENST00000539168 M0QYV0 167 aa21.52■■□□□ 1.04
CDH5-202ENST00000539168 EOMESO95936 686 aa21.52■■□□□ 1.04
CDH5-202ENST00000539168 GNL1P36915 607 aaPredicted RBP21.52■■□□□ 1.04
CDH5-202ENST00000539168 TMEM130Q8N3G9 435 aa21.52■■□□□ 1.04
CDH5-202ENST00000539168 GSTCDQ8NEC7 633 aa21.52■■□□□ 1.04
CDH5-202ENST00000539168 SPATA18Q8TC71 538 aa21.52■■□□□ 1.04
CDH5-202ENST00000539168 MS4A14Q96JA4 679 aa21.52■■□□□ 1.04
CDH5-202ENST00000539168 ZFP42Q96MM3 310 aa21.52■■□□□ 1.04
CDH5-202ENST00000539168 UROC1Q96N76 676 aa21.52■■□□□ 1.04
CDH5-202ENST00000539168 PARD6BQ9BYG5 372 aa21.52■■□□□ 1.04
CDH5-202ENST00000539168 UNC93B1Q9H1C4 597 aa21.52■■□□□ 1.04
CDH5-202ENST00000539168 SYNCQ9H7C4 482 aa21.52■■□□□ 1.04
CDH5-202ENST00000539168 ANKZF1Q9H8Y5 726 aa21.52■■□□□ 1.04
CDH5-202ENST00000539168 RGS18Q9NS28 235 aa21.52■■□□□ 1.04
CDH5-202ENST00000539168 HESX1Q9UBX0 185 aa21.52■■□□□ 1.04
CDH5-202ENST00000539168 CCDC151A5D8V7 595 aa21.51■■□□□ 1.03
CDH5-202ENST00000539168 INPPL1O15357 1258 aa21.51■■□□□ 1.03
CDH5-202ENST00000539168 ERLIN1O75477 346 aa21.51■■□□□ 1.03
CDH5-202ENST00000539168 WARSP23381 471 aaKnown RBP21.51■■□□□ 1.03
CDH5-202ENST00000539168 SSTR3P32745 418 aaPredicted RBP21.51■■□□□ 1.03
CDH5-202ENST00000539168 GPD2P43304 727 aa21.51■■□□□ 1.03
CDH5-202ENST00000539168 GABRB2P47870 512 aa21.51■■□□□ 1.03
CDH5-202ENST00000539168 RWDD2BP57060 319 aa21.51■■□□□ 1.03
CDH5-202ENST00000539168 C2orf54Q08AI8 447 aa21.51■■□□□ 1.03
CDH5-202ENST00000539168 GRIK3Q13003 919 aa21.51■■□□□ 1.03
CDH5-202ENST00000539168 SEL1L2Q5TEA6 688 aa21.51■■□□□ 1.03
CDH5-202ENST00000539168 WDR93Q6P2C0 686 aa21.51■■□□□ 1.03
CDH5-202ENST00000539168 TMEM86AQ8N2M4 240 aa21.51■■□□□ 1.03
CDH5-202ENST00000539168 TMEM59LQ9UK28 342 aa21.51■■□□□ 1.03
CDH5-202ENST00000539168 OGDHLQ9ULD0 1010 aa21.51■■□□□ 1.03
CDH5-202ENST00000539168 ARHGEF37A1IGU5 675 aa21.5■■□□□ 1.03
CDH5-202ENST00000539168 SELPP16109 830 aa21.5■■□□□ 1.03
CDH5-202ENST00000539168 PIGHQ14442 188 aaPredicted RBP21.5■■□□□ 1.03
CDH5-202ENST00000539168 DCUN1D2Q6PH85 259 aa21.5■■□□□ 1.03
CDH5-202ENST00000539168 ECHDC2Q86YB7 292 aa21.5■■□□□ 1.03
CDH5-202ENST00000539168 STK32AQ8WU08 396 aa21.5■■□□□ 1.03
CDH5-202ENST00000539168 CHORDC1Q9UHD1 332 aaPredicted RBP21.5■■□□□ 1.03
CDH5-202ENST00000539168 TSPAN16Q9UKR8 245 aa21.5■■□□□ 1.03
CDH5-202ENST00000539168 GOLGA6L10A0A0M3HER8 536 aa21.5■■□□□ 1.03
CDH5-202ENST00000539168 TCRBV5S1A1TA0A578 114 aa21.5■■□□□ 1.03
CDH5-202ENST00000539168 FAM170AA1A519 330 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms