RNA–Protein interactions for RNA: ENST00000516146.1

RNU6-27P-201, Transcript of RNA, U6 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU6-27P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-27P-201ENST00000516146 RIC8AQ9NPQ8 531 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 FAM30AQ9NZY2 134 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 IFT80Q9P2H3 777 aaPredicted RBP4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 SRP68Q9UHB9 627 aaKnown RBP4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 ADAM29Q9UKF5 820 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 HDAC5Q9UQL6 1122 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 MTO1Q9Y2Z2 717 aaKnown RBP4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 NR2E1Q9Y466 385 aa4.35□□□□□ -1.71
RNU6-27P-201ENST00000516146 PMS2P1A4D2B8 440 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 HMX3A6NHT5 357 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 C9orf118A6NHY6 69 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 FCHO1O14526 889 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 SNX2O60749 519 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 SOAT2O75908 522 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 ACTL6BO94805 426 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 AGFG2O95081 481 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 PLA2G1BP04054 148 aaKnown RBP4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 POLBP06746 335 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 CST5P28325 142 aaPredicted RBP4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 ADD2P35612 726 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 ALDH18A1P54886 795 aaKnown RBP4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 ADAM8P78325 824 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 TLE2Q04725 743 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 HGFACQ04756 655 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 NSUN2Q08J23 767 aaKnown RBP eCLIP4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 DUSP8Q13202 625 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 TRPC3Q13507 836 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 NFYCQ13952 458 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 KCTD2Q14681 263 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 SLC5A9Q2M3M2 681 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 TRIM71Q2Q1W2 868 aaKnown RBP4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 ATPAF1Q5TC12 328 aaPredicted RBP4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 FAXCQ5TGI0 409 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 PLAG1Q6DJT9 500 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 TTLL5Q6EMB2 1281 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 LIN54Q6MZP7 749 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 MRNIPQ6NTE8 343 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 MZT2BQ6NZ67 158 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 FAM180BQ6P0A1 224 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 KRBA2Q6ZNG9 492 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 C4orf50Q6ZRC1 276 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 C1orf122Q6ZSJ8 110 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 TMTC1Q8IUR5 882 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 CCDC89Q8N998 374 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 SLC17A8Q8NDX2 589 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 SLC35B2Q8TB61 432 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 THAP4Q8WY91 577 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 CFHR4Q92496 578 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 SIGLEC10Q96LC7 697 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 RBM15Q96T37 977 aaKnown RBP eCLIP4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 GPHA2Q96T91 129 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 TCF25Q9BQ70 676 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 SGPP1Q9BX95 441 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 FAM83DQ9H4H8 585 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 GSTO2Q9H4Y5 243 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 MSL2Q9HCI7 577 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 ZBTB26Q9HCK0 441 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 XPNPEP3Q9NQH7 507 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 ZMYND8Q9ULU4 1186 aaPredicted RBP4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 CAPN11Q9UMQ6 739 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 SLC45A2Q9UMX9 530 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 CLCA2Q9UQC9 943 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 ZDHHC9Q9Y397 364 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 RABGAP1Q9Y3P9 1069 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 IRAK3Q9Y616 596 aa4.34□□□□□ -1.71
RNU6-27P-201ENST00000516146 A0A087WZ62 844 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 A0A0B4J269 797 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 CCDC196A0A1B0GTZ2 297 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 A0A1W2PRX2 142 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 CDHR4A6H8M9 788 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 ZNF503-AS2A6NEH8 195 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 TBKBP1A7MCY6 615 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 HOXC11O43248 304 aaPredicted RBP4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 HOXA3O43365 443 aaPredicted RBP4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 TIMM44O43615 452 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 COQ9O75208 318 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 FAM155BO75949 473 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 BAIAP3O94812 1187 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 IFIT1P09914 478 aaKnown RBP4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 CKMT1AP12532 417 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 AARSP49588 968 aaKnown RBP eCLIP4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 AP2B1P63010 937 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 VAMP2P63027 116 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 IRX6P78412 446 aaPredicted RBP4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 KRT17Q04695 432 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 PIGFQ07326 219 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 UBXN2BQ14CS0 331 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 ACAP1Q15027 740 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 FAM110CQ1W6H9 321 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 MGAT5BQ3V5L5 792 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 FAM26FQ5R3K3 315 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 ATXN7L2Q5T6C5 722 aaPredicted RBP4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 VPS53Q5VIR6 699 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 DSTYKQ6XUX3 929 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 RINLQ6ZS11 566 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 KIAA0408Q6ZU52 694 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 USP49Q70CQ1 688 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 GAS2L3Q86XJ1 694 aa4.33□□□□□ -1.72
RNU6-27P-201ENST00000516146 CCDC28AQ8IWP9 274 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms