RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 ARHGAP25P42331 645 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 MAGEA1P43355 309 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 ASPAP45381 313 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 HADHBP55084 474 aaKnown RBP9.72□□□□□ -0.85
NR1I3-230ENST00000511944 MYL6P60660 151 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 OSTNP61366 133 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 CDR2Q01850 454 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 INCA1Q0VD86 236 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 ARHGAP44Q17R89 818 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 ZNF618Q5T7W0 954 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 LMBRD2Q68DH5 695 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-230ENST00000511944 LRRC8DQ7L1W4 858 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 DPH6Q7L8W6 267 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 CDR2LQ86X02 465 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-230ENST00000511944 ACRBPQ8NEB7 543 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 TRIM58Q8NG06 486 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 TRIM11Q96F44 468 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 CCDC97Q96F63 343 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-230ENST00000511944 C16orf45Q96MC5 204 aaPredicted RBP9.72□□□□□ -0.85
NR1I3-230ENST00000511944 AGPAT1Q99943 283 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 ISCUQ9H1K1 167 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 ELAC1Q9H777 363 aaKnown RBP9.72□□□□□ -0.85
NR1I3-230ENST00000511944 APOBEC3GQ9HC16 384 aaKnown RBP9.72□□□□□ -0.85
NR1I3-230ENST00000511944 RGS18Q9NS28 235 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 TRMT1Q9NXH9 659 aaKnown RBP9.72□□□□□ -0.85
NR1I3-230ENST00000511944 GDAP2Q9NXN4 497 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 SNTG2Q9NY99 539 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 ADAMTS1Q9UHI8 967 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 KIAA1257Q9ULG3 409 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 NUB1Q9Y5A7 615 aa9.72□□□□□ -0.85
NR1I3-230ENST00000511944 ANK1P16157 1881 aa9.71□□□□□ -0.85
NR1I3-230ENST00000511944 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.71□□□□□ -0.86
NR1I3-230ENST00000511944 ARHGEF37A1IGU5 675 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 ANKRD62A6NC57 917 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 DCDC2CA8MYV0 355 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 TMEM229AB2RXF0 380 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 DDX3XO00571 662 aaKnown RBP eCLIP9.71□□□□□ -0.86
NR1I3-230ENST00000511944 LRRN2O75325 713 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 DKK1O94907 266 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 CST3P01034 146 aaPredicted RBP9.71□□□□□ -0.86
NR1I3-230ENST00000511944 ITGB3P05106 788 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 PLEKP08567 350 aaPredicted RBP9.71□□□□□ -0.86
NR1I3-230ENST00000511944 CTSHP09668 335 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 H2AFZP0C0S5 128 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 TMEM253P0C7T8 217 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 ITGA4P13612 1032 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 CYP11B1P15538 503 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 TNFAIP3P21580 790 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 RPL9P32969 192 aaKnown RBP9.71□□□□□ -0.86
NR1I3-230ENST00000511944 RFC2P35250 354 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 GJA8P48165 433 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 TERF1P54274 439 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 ARID5AQ03989 594 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 MTFR1Q15390 333 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 STILQ15468 1287 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 SV2CQ496J9 727 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 CCDC122Q5T0U0 273 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 H2AFVQ71UI9 128 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 LIMS2Q7Z4I7 341 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 RHOT2Q8IXI1 618 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 OLIG1Q8TAK6 271 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 U2AF1L4Q8WU68 220 aaKnown RBP9.71□□□□□ -0.86
NR1I3-230ENST00000511944 DDX1Q92499 740 aaKnown RBP9.71□□□□□ -0.86
NR1I3-230ENST00000511944 SECISBP2LQ93073 1101 aaKnown RBP9.71□□□□□ -0.86
NR1I3-230ENST00000511944 HPDLQ96IR7 371 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 VCPIP1Q96JH7 1222 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 UROC1Q96N76 676 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 PPP1R10Q96QC0 940 aaKnown RBP9.71□□□□□ -0.86
NR1I3-230ENST00000511944 PI4K2AQ9BTU6 479 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 ZNF518BQ9C0D4 1074 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 AGO3Q9H9G7 860 aaKnown RBP9.71□□□□□ -0.86
NR1I3-230ENST00000511944 CISHQ9NSE2 258 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 LCMT1Q9UIC8 334 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 HRH3Q9Y5N1 445 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 UMODL1Q5DID0 1318 aa9.71□□□□□ -0.86
NR1I3-230ENST00000511944 PIRO00625 290 aa9.7□□□□□ -0.86
NR1I3-230ENST00000511944 CYP26A1O43174 497 aa9.7□□□□□ -0.86
NR1I3-230ENST00000511944 MED7O43513 233 aa9.7□□□□□ -0.86
NR1I3-230ENST00000511944 RTN2O75298 545 aa9.7□□□□□ -0.86
NR1I3-230ENST00000511944 TACC1O75410 805 aa9.7□□□□□ -0.86
NR1I3-230ENST00000511944 UPP2O95045 317 aa9.7□□□□□ -0.86
NR1I3-230ENST00000511944 CXCL10P02778 98 aa9.7□□□□□ -0.86
NR1I3-230ENST00000511944 MYBL1P10243 752 aa9.7□□□□□ -0.86
NR1I3-230ENST00000511944 GHRP10912 638 aa9.7□□□□□ -0.86
NR1I3-230ENST00000511944 KRT5P13647 590 aa9.7□□□□□ -0.86
NR1I3-230ENST00000511944 POLR2BP30876 1174 aaKnown RBP9.7□□□□□ -0.86
NR1I3-230ENST00000511944 CD52P31358 61 aa9.7□□□□□ -0.86
NR1I3-230ENST00000511944 TNNC1P63316 161 aa9.7□□□□□ -0.86
NR1I3-230ENST00000511944 FAM189BP81408 668 aa9.7□□□□□ -0.86
NR1I3-230ENST00000511944 GFPT1Q06210 699 aaPredicted RBP9.7□□□□□ -0.86
NR1I3-230ENST00000511944 NFX1Q12986 1120 aaKnown RBP9.7□□□□□ -0.86
NR1I3-230ENST00000511944 GRIK3Q13003 919 aa9.7□□□□□ -0.86
NR1I3-230ENST00000511944 WDR72Q3MJ13 1102 aa9.7□□□□□ -0.86
NR1I3-230ENST00000511944 CRTC2Q53ET0 693 aaPredicted RBP9.7□□□□□ -0.86
NR1I3-230ENST00000511944 DNTTIP2Q5QJE6 756 aaKnown RBP9.7□□□□□ -0.86
NR1I3-230ENST00000511944 C9orf57Q5W0N0 161 aa9.7□□□□□ -0.86
NR1I3-230ENST00000511944 SLC24A5Q71RS6 500 aa9.7□□□□□ -0.86
NR1I3-230ENST00000511944 UNC93AQ86WB7 457 aa9.7□□□□□ -0.86
NR1I3-230ENST00000511944 GLYCTKQ8IVS8 523 aa9.7□□□□□ -0.86
NR1I3-230ENST00000511944 C17orf53Q8N3J3 647 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms