RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 LDAHQ9H6V9 325 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 SIDT1Q9NXL6 827 aaKnown RBP5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 UTP6Q9NYH9 597 aaKnown RBP5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 SIK3Q9Y2K2 1263 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 NEU2Q9Y3R4 380 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 IPPQ9Y573 584 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 PCDHA13Q9Y5I0 950 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 RPS6KL1Q9Y6S9 549 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 FPGT-TNNI3KV9GXZ4 949 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 CNTLNQ9NXG0 1405 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 LRRIQ1Q96JM4 1722 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 AGLP35573 1532 aa5.28□□□□□ -1.56
HMGB3P13-201ENST00000511263 MAP3K4Q9Y6R4 1608 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 PTPRTO14522 1441 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 KIAA0391O15091 583 aaKnown RBP5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 KIF5CO60282 957 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 ANXA1P04083 346 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 S100BP04271 92 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 FAM200BP0CF97 657 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 CYP2C19P33261 490 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 COPB2P35606 906 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 IL12RB1P42701 662 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 CHN2P52757 468 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 RWDD2BP57060 319 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 RNASE9P60153 205 aaKnown RBP5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 NEXNQ0ZGT2 675 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 GPS2Q13227 327 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 IDI1Q13907 227 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 TTC31Q49AM3 519 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 CCDC157Q569K6 752 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 TEX35Q5T0J7 233 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 AGAP9Q5VTM2 703 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 LRRC55Q6ZSA7 311 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 KRT222Q8N1A0 295 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 AMER2Q8N7J2 671 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 NUP133Q8WUM0 1156 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 SIN3AQ96ST3 1273 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 PNKPQ96T60 521 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 SH3GL3Q99963 347 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 IQCGQ9H095 443 aaKnown RBP5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 SIK2Q9H0K1 926 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 VEZTQ9HBM0 779 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 DIP2BQ9P265 1576 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 TCEAL9Q9UHQ7 104 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 RUVBL1Q9Y265 456 aaKnown RBP5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 USP15Q9Y4E8 981 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 CDC42BPBQ9Y5S2 1711 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 ABCC1P33527 1531 aa5.27□□□□□ -1.57
HMGB3P13-201ENST00000511263 RPRD2Q5VT52 1461 aaKnown RBP5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 MYO5CQ9NQX4 1742 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 KDM5CP41229 1560 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 TTC37Q6PGP7 1564 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 PLSCR1O15162 318 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 EPB41L2O43491 1005 aaKnown RBP5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 HTATSF1O43719 755 aaKnown RBP5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 AMY1AP04745 511 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 VDRP11473 427 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 CKBP12277 381 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 PDCP20941 246 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 GCSHP23434 173 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 AVPR1BP47901 424 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 ATP8B2P98198 1209 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 ICA1Q05084 483 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 FOXD4Q12950 439 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 PIN1Q13526 163 aaPredicted RBP5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 MAP9Q49MG5 647 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 AMOTQ4VCS5 1084 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 ODR4Q5SWX8 454 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 TSHZ3Q63HK5 1081 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 USP45Q70EL2 814 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 EFCAB13Q8IY85 973 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 IL17RDQ8NFM7 739 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 FBXO18Q8NFZ0 1043 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 OR2I1PQ8NGU4 316 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 MTFMTQ96DP5 389 aaKnown RBP5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 HOOK2Q96ED9 719 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 MAP3K14Q99558 947 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 WDCPQ9H6R7 721 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 AKIP1Q9NQ31 210 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 IP6K2Q9UHH9 426 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 LIMCH1Q9UPQ0 1083 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 THRAP3Q9Y2W1 955 aaKnown RBP5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 FAM135AQ9P2D6 1515 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 CDC42BPAQ5VT25 1732 aa5.26□□□□□ -1.57
HMGB3P13-201ENST00000511263 VIRMAQ69YN4 1812 aaKnown RBP5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 SYCP2Q9BX26 1530 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 GRXCR1A8MXD5 290 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 LEFTY2O00292 366 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 IPO5O00410 1097 aaKnown RBP5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 ERN1O75460 977 aaKnown RBP5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 RHOBTB3O94955 611 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 BAG4O95429 457 aaKnown RBP5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 FOSP01100 380 aaPredicted RBP5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 POU2F2P09086 479 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 TPM1P09493 284 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 HSPA6P17066 643 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 FPR1P21462 350 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 PCSK1P29120 753 aa5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 PURAQ00577 322 aaKnown RBP5.25□□□□□ -1.57
HMGB3P13-201ENST00000511263 GUCY1B3Q02153 619 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms