RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 OFD1O75665 1012 aa4.38□□□□□ -1.71
HMGB1P29-201ENST00000505659 UNC5CO95185 931 aa4.38□□□□□ -1.71
HMGB1P29-201ENST00000505659 GRIA3P42263 894 aa4.38□□□□□ -1.71
HMGB1P29-201ENST00000505659 GCLCP48506 637 aaPredicted RBP4.38□□□□□ -1.71
HMGB1P29-201ENST00000505659 SOX8P57073 446 aa4.38□□□□□ -1.71
HMGB1P29-201ENST00000505659 TCF15Q12870 199 aa4.38□□□□□ -1.71
HMGB1P29-201ENST00000505659 EIF2B5Q13144 721 aaKnown RBP4.38□□□□□ -1.71
HMGB1P29-201ENST00000505659 PTPRRQ15256 657 aa4.38□□□□□ -1.71
HMGB1P29-201ENST00000505659 PGBD1Q96JS3 809 aa4.38□□□□□ -1.71
HMGB1P29-201ENST00000505659 NT5C1BQ96P26 610 aa4.38□□□□□ -1.71
HMGB1P29-201ENST00000505659 ACTRT3Q9BYD9 372 aa4.38□□□□□ -1.71
HMGB1P29-201ENST00000505659 TPSD1Q9BZJ3 242 aa4.38□□□□□ -1.71
HMGB1P29-201ENST00000505659 AMBRA1Q9C0C7 1298 aa4.38□□□□□ -1.71
HMGB1P29-201ENST00000505659 TTYH3Q9C0H2 523 aa4.38□□□□□ -1.71
HMGB1P29-201ENST00000505659 SERHLQ9NQF3 203 aa4.38□□□□□ -1.71
HMGB1P29-201ENST00000505659 ANLNQ9NQW6 1124 aa4.38□□□□□ -1.71
HMGB1P29-201ENST00000505659 DKK3Q9UBP4 350 aa4.38□□□□□ -1.71
HMGB1P29-201ENST00000505659 CPA4Q9UI42 421 aa4.38□□□□□ -1.71
HMGB1P29-201ENST00000505659 STXBP5LQ9Y2K9 1186 aa4.38□□□□□ -1.71
HMGB1P29-201ENST00000505659 RAD54BQ9Y620 910 aa4.38□□□□□ -1.71
HMGB1P29-201ENST00000505659 PCSK5Q92824 1860 aa4.38□□□□□ -1.71
HMGB1P29-201ENST00000505659 GNAI2P04899 355 aa4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 PIM1P11309 404 aaPredicted RBP4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 ITGALP20701 1170 aa4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 FBLP22087 321 aaKnown RBP4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 PCSK6P29122 969 aa4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 CD6P30203 668 aa4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 IL12RB1P42701 662 aa4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 PROK1P58294 105 aa4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 C21orf58P58505 322 aa4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 SP2Q02086 613 aa4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 AKNAD1Q5T1N1 836 aa4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 TSTD2Q5T7W7 516 aa4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 TMEM108Q6UXF1 575 aa4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 AMIGO2Q86SJ2 522 aa4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 KLHDC4Q8TBB5 520 aa4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 BRIX1Q8TDN6 353 aaKnown RBP4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 ZNF384Q8TF68 577 aa4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 CDK5RAP3Q96JB5 506 aa4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 FAM167AQ96KS9 214 aa4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 SLC46A1Q96NT5 459 aa4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 HEPHQ9BQS7 1158 aa4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 CPNE5Q9HCH3 593 aa4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 ZIM2Q9NZV7 527 aa4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 SLC17A6Q9P2U8 582 aa4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 HESX1Q9UBX0 185 aa4.37□□□□□ -1.71
HMGB1P29-201ENST00000505659 PPM1DO15297 605 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 PRPF3O43395 683 aaKnown RBP4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 NR2F6P10588 404 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 VCAM1P19320 739 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 NCLP19338 710 aaKnown RBP4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 RAB1AP62820 205 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 MRPS21P82921 87 aaKnown RBP4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 ITIH3Q06033 890 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 LRRC41Q15345 812 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 CCDC142Q17RM4 750 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 NBPF8Q3BBV2 869 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 KHDC1LQ5JSQ8 128 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 FAM160B1Q5W0V3 765 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 B3GNT9Q6UX72 402 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 FAM109AQ8N4B1 249 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 CAMKK1Q8N5S9 505 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 RFKQ969G6 155 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 VOPP1Q96AW1 172 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 FKBP10Q96AY3 582 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 C1GALT1C1Q96EU7 318 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 MRGPRX1Q96LB2 322 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 UROC1Q96N76 676 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 TAAR9Q96RI9 348 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 P2RX7Q99572 595 aaKnown RBP4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 ACO2Q99798 780 aaKnown RBP4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 SPATA5L1Q9BVQ7 753 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 CDH19Q9H159 772 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 KLC4Q9NSK0 619 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 ARPP21Q9UBL0 812 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 GABBR1Q9UBS5 961 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 ADAM21Q9UKJ8 722 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 SPATA31A3Q5VYP0 1347 aa4.36□□□□□ -1.71
HMGB1P29-201ENST00000505659 TRIAP1O43715 76 aa4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 ERBB2P04626 1255 aa4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 ITPKBP27987 946 aa4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 HTR1BP28222 390 aa4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 KCNJ5P48544 419 aa4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 ELLP55199 621 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 NXPH1P58417 271 aa4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 LILRA4P59901 499 aa4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 TBCCQ15814 346 aa4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 COLEC12Q5KU26 742 aa4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 ODR4Q5SWX8 454 aa4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 EMC10Q5UCC4 262 aa4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 SYCE2Q6PIF2 218 aa4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 EPM2AIP1Q7L775 607 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 RASAL3Q86YV0 1011 aa4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 DENND1CQ8IV53 801 aa4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 ZBTB34Q8NCN2 500 aa4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 FAM136AQ96C01 138 aa4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 PBKQ96KB5 322 aa4.35□□□□□ -1.71
HMGB1P29-201ENST00000505659 OSBPL9Q96SU4 736 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms