RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 RHOBTB2Q9BYZ6 727 aa5.96□□□□□ -1.46
UBE2D3-218ENST00000505009 TPSD1Q9BZJ3 242 aa5.96□□□□□ -1.46
UBE2D3-218ENST00000505009 AMBRA1Q9C0C7 1298 aa5.96□□□□□ -1.46
UBE2D3-218ENST00000505009 SLC12A5Q9H2X9 1139 aa5.96□□□□□ -1.46
UBE2D3-218ENST00000505009 CPNE5Q9HCH3 593 aa5.96□□□□□ -1.46
UBE2D3-218ENST00000505009 DDX56Q9NY93 547 aaKnown RBP5.96□□□□□ -1.46
UBE2D3-218ENST00000505009 DKK3Q9UBP4 350 aa5.96□□□□□ -1.46
UBE2D3-218ENST00000505009 SPATA31A3Q5VYP0 1347 aa5.96□□□□□ -1.46
UBE2D3-218ENST00000505009 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.95□□□□□ -1.46
UBE2D3-218ENST00000505009 GNAI2P04899 355 aa5.95□□□□□ -1.46
UBE2D3-218ENST00000505009 PDGFRBP09619 1106 aa5.95□□□□□ -1.46
UBE2D3-218ENST00000505009 CD38P28907 300 aa5.95□□□□□ -1.46
UBE2D3-218ENST00000505009 ITIH3Q06033 890 aa5.95□□□□□ -1.46
UBE2D3-218ENST00000505009 MCL1Q07820 350 aa5.95□□□□□ -1.46
UBE2D3-218ENST00000505009 TTF1Q15361 905 aaPredicted RBP5.95□□□□□ -1.46
UBE2D3-218ENST00000505009 ATAT1Q5SQI0 421 aa5.95□□□□□ -1.46
UBE2D3-218ENST00000505009 FAM46DQ8NEK8 389 aa5.95□□□□□ -1.46
UBE2D3-218ENST00000505009 UROC1Q96N76 676 aa5.95□□□□□ -1.46
UBE2D3-218ENST00000505009 CGRRF1Q99675 332 aa5.95□□□□□ -1.46
UBE2D3-218ENST00000505009 RTFDC1Q9BY42 306 aaPredicted RBP5.95□□□□□ -1.46
UBE2D3-218ENST00000505009 ACTRT3Q9BYD9 372 aa5.95□□□□□ -1.46
UBE2D3-218ENST00000505009 ARMT1Q9H993 441 aa5.95□□□□□ -1.46
UBE2D3-218ENST00000505009 ARPP21Q9UBL0 812 aaPredicted RBP5.95□□□□□ -1.46
UBE2D3-218ENST00000505009 PCDHA6Q9UN73 950 aa5.95□□□□□ -1.46
UBE2D3-218ENST00000505009 RAD54BQ9Y620 910 aa5.95□□□□□ -1.46
UBE2D3-218ENST00000505009 TRIAP1O43715 76 aa5.94□□□□□ -1.46
UBE2D3-218ENST00000505009 DNAJB5O75953 348 aa5.94□□□□□ -1.46
UBE2D3-218ENST00000505009 C1RP00736 705 aa5.94□□□□□ -1.46
UBE2D3-218ENST00000505009 ITGALP20701 1170 aa5.94□□□□□ -1.46
UBE2D3-218ENST00000505009 GCLCP48506 637 aaPredicted RBP5.94□□□□□ -1.46
UBE2D3-218ENST00000505009 ZNF134P52741 427 aa5.94□□□□□ -1.46
UBE2D3-218ENST00000505009 PROK1P58294 105 aa5.94□□□□□ -1.46
UBE2D3-218ENST00000505009 NXPH1P58417 271 aa5.94□□□□□ -1.46
UBE2D3-218ENST00000505009 RFKQ969G6 155 aa5.94□□□□□ -1.46
UBE2D3-218ENST00000505009 CAMKK2Q96RR4 588 aa5.94□□□□□ -1.46
UBE2D3-218ENST00000505009 OSBPL9Q96SU4 736 aa5.94□□□□□ -1.46
UBE2D3-218ENST00000505009 MAP3K14Q99558 947 aa5.94□□□□□ -1.46
UBE2D3-218ENST00000505009 SERHLQ9NQF3 203 aa5.94□□□□□ -1.46
UBE2D3-218ENST00000505009 ADARB2Q9NS39 739 aaKnown RBP5.94□□□□□ -1.46
UBE2D3-218ENST00000505009 KLC4Q9NSK0 619 aa5.94□□□□□ -1.46
UBE2D3-218ENST00000505009 ADAM21Q9UKJ8 722 aa5.94□□□□□ -1.46
UBE2D3-218ENST00000505009 PNMA8BQ9ULN7 279 aaPredicted RBP5.94□□□□□ -1.46
UBE2D3-218ENST00000505009 ENTPD2Q9Y5L3 495 aa5.94□□□□□ -1.46
UBE2D3-218ENST00000505009 DCLK1O15075 740 aa5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 RBMXL2O75526 392 aaKnown RBP5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 OFD1O75665 1012 aa5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 PIM1P11309 404 aaPredicted RBP5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 ITPKBP27987 946 aa5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 CD6P30203 668 aa5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 RAB27AP51159 221 aa5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 EIF2B5Q13144 721 aaKnown RBP5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 PIN1Q13526 163 aaPredicted RBP5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 IFIT1BQ5T764 474 aaKnown RBP5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 TMEM108Q6UXF1 575 aa5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 GRASPQ7Z6J2 395 aaPredicted RBP5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 AMIGO2Q86SJ2 522 aa5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 FAM109AQ8N4B1 249 aa5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 BRIX1Q8TDN6 353 aaKnown RBP5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 FKBP10Q96AY3 582 aa5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 MTFMTQ96DP5 389 aaKnown RBP5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 C1GALT1C1Q96EU7 318 aa5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 CDK5RAP3Q96JB5 506 aa5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 SLC46A1Q96NT5 459 aa5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 TIMP4Q99727 224 aa5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 TTYH3Q9C0H2 523 aa5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 STAP2Q9UGK3 403 aa5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 SHROOM4Q9ULL8 1493 aa5.93□□□□□ -1.46
UBE2D3-218ENST00000505009 PPM1DO15297 605 aa5.92□□□□□ -1.46
UBE2D3-218ENST00000505009 AKAP10O43572 662 aa5.92□□□□□ -1.46
UBE2D3-218ENST00000505009 AP1G1O43747 822 aa5.92□□□□□ -1.46
UBE2D3-218ENST00000505009 UNC5CO95185 931 aa5.92□□□□□ -1.46
UBE2D3-218ENST00000505009 NR2F6P10588 404 aa5.92□□□□□ -1.46
UBE2D3-218ENST00000505009 SOX8P57073 446 aa5.92□□□□□ -1.46
UBE2D3-218ENST00000505009 SP2Q02086 613 aa5.92□□□□□ -1.46
UBE2D3-218ENST00000505009 NHLH1Q02575 133 aa5.92□□□□□ -1.46
UBE2D3-218ENST00000505009 FAM160B1Q5W0V3 765 aa5.92□□□□□ -1.46
UBE2D3-218ENST00000505009 RASAL3Q86YV0 1011 aa5.92□□□□□ -1.46
UBE2D3-218ENST00000505009 TPH2Q8IWU9 490 aa5.92□□□□□ -1.46
UBE2D3-218ENST00000505009 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.92□□□□□ -1.46
UBE2D3-218ENST00000505009 CAMKK1Q8N5S9 505 aa5.92□□□□□ -1.46
UBE2D3-218ENST00000505009 DIS3LQ8TF46 1054 aaKnown RBP5.92□□□□□ -1.46
UBE2D3-218ENST00000505009 FAM136AQ96C01 138 aa5.92□□□□□ -1.46
UBE2D3-218ENST00000505009 PBKQ96KB5 322 aa5.92□□□□□ -1.46
UBE2D3-218ENST00000505009 LRGUKQ96M69 825 aa5.92□□□□□ -1.46
UBE2D3-218ENST00000505009 HESX1Q9UBX0 185 aa5.92□□□□□ -1.46
UBE2D3-218ENST00000505009 ZNF180Q9UJW8 692 aa5.92□□□□□ -1.46
UBE2D3-218ENST00000505009 STXBP5LQ9Y2K9 1186 aa5.92□□□□□ -1.46
UBE2D3-218ENST00000505009 FRMD4BQ9Y2L6 1034 aa5.92□□□□□ -1.46
UBE2D3-218ENST00000505009 TNFRSF18Q9Y5U5 241 aa5.92□□□□□ -1.46
UBE2D3-218ENST00000505009 URI1O94763 535 aaPredicted RBP5.91□□□□□ -1.46
UBE2D3-218ENST00000505009 PCSK6P29122 969 aa5.91□□□□□ -1.46
UBE2D3-218ENST00000505009 EPHB1P54762 984 aa5.91□□□□□ -1.46
UBE2D3-218ENST00000505009 TBCCQ15814 346 aa5.91□□□□□ -1.46
UBE2D3-218ENST00000505009 KHDC1LQ5JSQ8 128 aa5.91□□□□□ -1.46
UBE2D3-218ENST00000505009 EMC10Q5UCC4 262 aa5.91□□□□□ -1.46
UBE2D3-218ENST00000505009 RAVER1Q8IY67 606 aaKnown RBP5.91□□□□□ -1.46
UBE2D3-218ENST00000505009 PPP1R35Q8TAP8 253 aa5.91□□□□□ -1.46
UBE2D3-218ENST00000505009 KLHDC4Q8TBB5 520 aa5.91□□□□□ -1.46
UBE2D3-218ENST00000505009 JPH3Q8WXH2 748 aaPredicted RBP5.91□□□□□ -1.46
UBE2D3-218ENST00000505009 SARAFQ96BY9 339 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms