RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 CELF4Q9BZC1 486 aaKnown RBP8.22□□□□□ -1.09
CDC42-205ENST00000498236 FAM124BQ9H5Z6 455 aaPredicted RBP8.22□□□□□ -1.09
CDC42-205ENST00000498236 PLEKHA5Q9HAU0 1116 aa8.22□□□□□ -1.09
CDC42-205ENST00000498236 BRD7Q9NPI1 651 aa8.22□□□□□ -1.09
CDC42-205ENST00000498236 INTUQ9ULD6 942 aa8.22□□□□□ -1.09
CDC42-205ENST00000498236 CNTN6Q9UQ52 1028 aa8.22□□□□□ -1.09
CDC42-205ENST00000498236 DERAQ9Y315 318 aa8.22□□□□□ -1.09
CDC42-205ENST00000498236 C2CD2Q9Y426 696 aa8.22□□□□□ -1.09
CDC42-205ENST00000498236 PCDHA13Q9Y5I0 950 aa8.22□□□□□ -1.09
CDC42-205ENST00000498236 GRIN2DO15399 1336 aa8.22□□□□□ -1.09
CDC42-205ENST00000498236 MROH7Q68CQ1 1323 aa8.22□□□□□ -1.09
CDC42-205ENST00000498236 A0A087X0T9 212 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 BTNL10A8MVZ5 291 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 MEFVO15553 781 aaPredicted RBP8.21□□□□□ -1.1
CDC42-205ENST00000498236 LRRN2O75325 713 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 TNNC2P02585 160 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 FAM228BP0C875 321 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 TBXAS1P24557 533 aaPredicted RBP8.21□□□□□ -1.1
CDC42-205ENST00000498236 PIK3CAP42336 1068 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 MAGEA1P43355 309 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 ACLYP53396 1101 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 CHMP4BP1P59074 171 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 HTRA3P83110 453 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 CYP27A1Q02318 531 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 ARID5AQ03989 594 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 GFPT1Q06210 699 aaPredicted RBP8.21□□□□□ -1.1
CDC42-205ENST00000498236 TMEM62Q0P6H9 643 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 KIF5AQ12840 1032 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 BIRC3Q13489 604 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 NAB2Q15742 525 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 SGSM1Q2NKQ1 1148 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 SLC10A6Q3KNW5 377 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 SEZ6Q53EL9 994 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 PDE12Q6L8Q7 609 aaKnown RBP8.21□□□□□ -1.1
CDC42-205ENST00000498236 XKR5Q6UX68 686 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 KIAA1328Q86T90 577 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 EFCAB13Q8IY85 973 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 PPM1KQ8N3J5 372 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 CEP120Q8N960 986 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 SLC43A3Q8NBI5 491 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 ARRDC4Q8NCT1 418 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 CXorf38Q8TB03 319 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 TMEM40Q8WWA1 233 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 ANKRD36BP1Q96IX9 119 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 CPB2Q96IY4 423 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 ACAP3Q96P50 834 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 PPP1R16BQ96T49 567 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 IMPG2Q9BZV3 1241 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 ZCCHC2Q9C0B9 1178 aaKnown RBP8.21□□□□□ -1.1
CDC42-205ENST00000498236 SENP6Q9GZR1 1112 aaPredicted RBP8.21□□□□□ -1.1
CDC42-205ENST00000498236 LACRTQ9GZZ8 138 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 C11orf16Q9NQ32 467 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 LZTFL1Q9NQ48 299 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 CHST12Q9NRB3 414 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 C1orf112Q9NSG2 853 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 KIAA1522Q9P206 1035 aaPredicted RBP8.21□□□□□ -1.1
CDC42-205ENST00000498236 ADAMTS1Q9UHI8 967 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 TRPV2Q9Y5S1 764 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 KCNMB2Q9Y691 235 aa8.21□□□□□ -1.1
CDC42-205ENST00000498236 A0A0U1RQJ8 604 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 LACTBL1A8MY62 500 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 M0QZ92 97 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 DDX3XO00571 662 aaKnown RBP eCLIP8.2□□□□□ -1.12e-17■■■□□ 16
CDC42-205ENST00000498236 PHACTR2O75167 634 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 TMEM191BP0C7N4 346 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 FAM157BP0CG42 384 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 CXCL8P10145 99 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 ACO1P21399 889 aaKnown RBP8.2□□□□□ -1.1
CDC42-205ENST00000498236 ATICP31939 592 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 BPIFB4P59827 614 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 GNG11P61952 73 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 NOP14P78316 857 aaKnown RBP8.2□□□□□ -1.1
CDC42-205ENST00000498236 MGAT3Q09327 533 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 CUL2Q13617 745 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 ITGA7Q13683 1181 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 TRIP4Q15650 581 aaPredicted RBP8.2□□□□□ -1.1
CDC42-205ENST00000498236 ARHGAP44Q17R89 818 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 XKR4Q5GH76 650 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 CCDC122Q5T0U0 273 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 LMBRD2Q68DH5 695 aaPredicted RBP8.2□□□□□ -1.1
CDC42-205ENST00000498236 ALKAL1Q6UXT8 129 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 SYT10Q6XYQ8 523 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 FAM43BQ6ZT52 329 aaPredicted RBP8.2□□□□□ -1.1
CDC42-205ENST00000498236 ZNF438Q7Z4V0 828 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 CDR2LQ86X02 465 aaPredicted RBP8.2□□□□□ -1.1
CDC42-205ENST00000498236 ZNF677Q86XU0 584 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 TMEM192Q8IY95 271 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 RNF10Q8N5U6 811 aaKnown RBP8.2□□□□□ -1.1
CDC42-205ENST00000498236 UBR7Q8N806 425 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 ATRIPQ8WXE1 791 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 KAT5Q92993 513 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 GLT1D1Q96MS3 346 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 CCDC94Q9BW85 323 aaPredicted RBP8.2□□□□□ -1.1
CDC42-205ENST00000498236 MTMR12Q9C0I1 747 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 XYLT2Q9H1B5 865 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 APOBEC3GQ9HC16 384 aaKnown RBP8.2□□□□□ -1.1
CDC42-205ENST00000498236 NAGPAQ9UK23 515 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 NOCTQ9UK39 431 aaKnown RBP8.2□□□□□ -1.1
CDC42-205ENST00000498236 ITGA11Q9UKX5 1188 aa8.2□□□□□ -1.1
CDC42-205ENST00000498236 PCDHGC4Q9Y5F7 938 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms