RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 SLC12A5Q9H2X9 1139 aa4.16□□□□□ -1.74
PHC3-216ENST00000497171 C1orf112Q9NSG2 853 aa4.16□□□□□ -1.74
PHC3-216ENST00000497171 TDP1Q9NUW8 608 aa4.16□□□□□ -1.74
PHC3-216ENST00000497171 SCOCQ9UIL1 159 aa4.16□□□□□ -1.74
PHC3-216ENST00000497171 FAM50BQ9Y247 325 aa4.16□□□□□ -1.74
PHC3-216ENST00000497171 BTBD3Q9Y2F9 522 aa4.16□□□□□ -1.74
PHC3-216ENST00000497171 IPPQ9Y573 584 aa4.16□□□□□ -1.74
PHC3-216ENST00000497171 TEX33O43247 280 aa4.15□□□□□ -1.75
PHC3-216ENST00000497171 ENDOD1O94919 500 aa4.15□□□□□ -1.75
PHC3-216ENST00000497171 NTN1O95631 604 aa4.15□□□□□ -1.75
PHC3-216ENST00000497171 FTLP02792 175 aaPredicted RBP4.15□□□□□ -1.75
PHC3-216ENST00000497171 MYL1P05976 194 aa4.15□□□□□ -1.75
PHC3-216ENST00000497171 SRGNP10124 158 aa4.15□□□□□ -1.75
PHC3-216ENST00000497171 EDNRBP24530 442 aa4.15□□□□□ -1.75
PHC3-216ENST00000497171 EPHB2P29323 1055 aa4.15□□□□□ -1.75
PHC3-216ENST00000497171 MGAT2Q10469 447 aa4.15□□□□□ -1.75
PHC3-216ENST00000497171 MAP9Q49MG5 647 aa4.15□□□□□ -1.75
PHC3-216ENST00000497171 ZNF529Q6P280 563 aa4.15□□□□□ -1.75
PHC3-216ENST00000497171 VWA1Q6PCB0 445 aa4.15□□□□□ -1.75
PHC3-216ENST00000497171 B3GNT9Q6UX72 402 aa4.15□□□□□ -1.75
PHC3-216ENST00000497171 NEK8Q86SG6 692 aa4.15□□□□□ -1.75
PHC3-216ENST00000497171 PQLC1Q8N2U9 271 aa4.15□□□□□ -1.75
PHC3-216ENST00000497171 TOR1AIP2Q8NFQ8 470 aa4.15□□□□□ -1.75
PHC3-216ENST00000497171 PPP1R35Q8TAP8 253 aa4.15□□□□□ -1.75
PHC3-216ENST00000497171 HMCESQ96FZ2 354 aa4.15□□□□□ -1.75
PHC3-216ENST00000497171 PGBD1Q96JS3 809 aa4.15□□□□□ -1.75
PHC3-216ENST00000497171 LDAHQ9H6V9 325 aa4.15□□□□□ -1.75
PHC3-216ENST00000497171 INTS13Q9NVM9 706 aa4.15□□□□□ -1.75
PHC3-216ENST00000497171 FAM30AQ9NZY2 134 aa4.15□□□□□ -1.75
PHC3-216ENST00000497171 AOX1Q06278 1338 aa4.15□□□□□ -1.75
PHC3-216ENST00000497171 PNPLA7Q6ZV29 1317 aa4.15□□□□□ -1.75
PHC3-216ENST00000497171 NBPF7P0C2Y1 421 aaPredicted RBP4.14□□□□□ -1.75
PHC3-216ENST00000497171 SEPT2Q15019 361 aa4.14□□□□□ -1.75
PHC3-216ENST00000497171 TMEM119Q4V9L6 283 aa4.14□□□□□ -1.75
PHC3-216ENST00000497171 AWAT2Q6E213 333 aa4.14□□□□□ -1.75
PHC3-216ENST00000497171 CCSAPQ6IQ19 270 aaPredicted RBP4.14□□□□□ -1.75
PHC3-216ENST00000497171 CCDC149Q6ZUS6 474 aa4.14□□□□□ -1.75
PHC3-216ENST00000497171 Q6ZVL8 140 aa4.14□□□□□ -1.75
PHC3-216ENST00000497171 TTC7BQ86TV6 843 aa4.14□□□□□ -1.75
PHC3-216ENST00000497171 DENND1CQ8IV53 801 aa4.14□□□□□ -1.75
PHC3-216ENST00000497171 FITM2Q8N6M3 262 aa4.14□□□□□ -1.75
PHC3-216ENST00000497171 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.14□□□□□ -1.75
PHC3-216ENST00000497171 NUP133Q8WUM0 1156 aa4.14□□□□□ -1.75
PHC3-216ENST00000497171 STON2Q8WXE9 905 aa4.14□□□□□ -1.75
PHC3-216ENST00000497171 RUNDC1Q96C34 613 aa4.14□□□□□ -1.75
PHC3-216ENST00000497171 C1GALT1C1Q96EU7 318 aa4.14□□□□□ -1.75
PHC3-216ENST00000497171 TMX3Q96JJ7 454 aa4.14□□□□□ -1.75
PHC3-216ENST00000497171 CLPTM1LQ96KA5 538 aa4.14□□□□□ -1.75
PHC3-216ENST00000497171 MANSC1Q9H8J5 431 aa4.14□□□□□ -1.75
PHC3-216ENST00000497171 FAM204AQ9H8W3 233 aa4.14□□□□□ -1.75
PHC3-216ENST00000497171 MAN1C1Q9NR34 630 aa4.14□□□□□ -1.75
PHC3-216ENST00000497171 SLC52A1Q9NWF4 448 aa4.14□□□□□ -1.75
PHC3-216ENST00000497171 MYMKA6NI61 221 aa4.13□□□□□ -1.75
PHC3-216ENST00000497171 PPEF2O14830 753 aa4.13□□□□□ -1.75
PHC3-216ENST00000497171 PROM1O43490 865 aa4.13□□□□□ -1.75
PHC3-216ENST00000497171 UBXN7O94888 489 aa4.13□□□□□ -1.75
PHC3-216ENST00000497171 ALDH2P05091 517 aa4.13□□□□□ -1.75
PHC3-216ENST00000497171 MMP13P45452 471 aa4.13□□□□□ -1.75
PHC3-216ENST00000497171 LAMB3Q13751 1172 aa4.13□□□□□ -1.75
PHC3-216ENST00000497171 HLTFQ14527 1009 aaKnown RBP eCLIP4.13□□□□□ -1.75
PHC3-216ENST00000497171 GBX1Q14549 363 aa4.13□□□□□ -1.75
PHC3-216ENST00000497171 PTPRRQ15256 657 aa4.13□□□□□ -1.75
PHC3-216ENST00000497171 COBLL1Q53SF7 1204 aa4.13□□□□□ -1.75
PHC3-216ENST00000497171 GADL1Q6ZQY3 521 aa4.13□□□□□ -1.75
PHC3-216ENST00000497171 PRR18Q8N4B5 295 aa4.13□□□□□ -1.75
PHC3-216ENST00000497171 TMEM125Q96AQ2 219 aa4.13□□□□□ -1.75
PHC3-216ENST00000497171 MARS2Q96GW9 593 aaKnown RBP4.13□□□□□ -1.75
PHC3-216ENST00000497171 CGRRF1Q99675 332 aa4.13□□□□□ -1.75
PHC3-216ENST00000497171 VRK1Q99986 396 aaPredicted RBP4.13□□□□□ -1.75
PHC3-216ENST00000497171 PCGF6Q9BYE7 350 aa4.13□□□□□ -1.75
PHC3-216ENST00000497171 ARMT1Q9H993 441 aa4.13□□□□□ -1.75
PHC3-216ENST00000497171 LANCL2Q9NS86 450 aa4.13□□□□□ -1.75
PHC3-216ENST00000497171 TMEM140Q9NV12 185 aa4.13□□□□□ -1.75
PHC3-216ENST00000497171 AJAP1Q9UKB5 411 aaPredicted RBP4.13□□□□□ -1.75
PHC3-216ENST00000497171 RUVBL1Q9Y265 456 aaKnown RBP4.13□□□□□ -1.75
PHC3-216ENST00000497171 SIK3Q9Y2K2 1263 aa4.13□□□□□ -1.75
PHC3-216ENST00000497171 PCDHB1Q9Y5F3 818 aa4.13□□□□□ -1.75
PHC3-216ENST00000497171 NR2E3Q9Y5X4 410 aa4.13□□□□□ -1.75
PHC3-216ENST00000497171 CFAP20Q9Y6A4 193 aaKnown RBP4.13□□□□□ -1.75
PHC3-216ENST00000497171 MYBBP1AQ9BQG0 1328 aaKnown RBP4.13□□□□□ -1.75
PHC3-216ENST00000497171 ATRNL1Q5VV63 1379 aa4.13□□□□□ -1.75
PHC3-216ENST00000497171 CCDC78A2IDD5 438 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 LRRC14BA6NHZ5 514 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 LINC00473A8K010 186 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 PRR23D1E9PI22 279 aaPredicted RBP4.12□□□□□ -1.75
PHC3-216ENST00000497171 H3BUI4 141 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 PEX14O75381 377 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 URI1O94763 535 aaPredicted RBP4.12□□□□□ -1.75
PHC3-216ENST00000497171 TTLL1O95922 423 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 CHRM2P08172 466 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 PRR23D2P0DMB1 279 aaPredicted RBP4.12□□□□□ -1.75
PHC3-216ENST00000497171 SLC6A2P23975 617 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 HTR1BP28222 390 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 WASP42768 502 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 CDC42EP1Q00587 391 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 ZNF260Q3ZCT1 412 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 KHDC1Q4VXA5 237 aaKnown RBP4.12□□□□□ -1.75
PHC3-216ENST00000497171 SLC44A4Q53GD3 710 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 SYCP2LQ5T4T6 812 aa4.12□□□□□ -1.75
PHC3-216ENST00000497171 THEMIS2Q5TEJ8 643 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms