RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 APBA1Q02410 837 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 POU5F1BQ06416 359 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 CASC4Q6P4E1 433 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 ANKS3Q6ZW76 656 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 CHP1Q99653 195 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 DHX35Q9H5Z1 703 aaKnown RBP9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 PHF24Q9UPV7 400 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 V9GYY5 206 aaPredicted RBP9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 ADGRA2Q96PE1 1338 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 ECM29Q5VYK3 1845 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 GTPBP10A4D1E9 387 aaKnown RBP9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 MMEP08473 750 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 VPS41P49754 854 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 PLD1Q13393 1074 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 MAATS1Q7Z4T9 603 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 ECHDC2Q86YB7 292 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 DAW1Q8N136 415 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 DDX50Q9BQ39 737 aaKnown RBP9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 ST6GALNAC4Q9H4F1 302 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 CDHR5Q9HBB8 845 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 TRPM5Q9NZQ8 1165 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 FEZ2Q9UHY8 353 aaPredicted RBP9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 PHIPQ8WWQ0 1821 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 CYP11B1P15538 503 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 LPIN1Q14693 890 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 EFHC1Q5JVL4 640 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 C9orf57Q5W0N0 161 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 SLC47A2Q86VL8 602 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 CRYGNQ8WXF5 182 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 TMEM161AQ9NX61 479 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 TXNDC16Q9P2K2 825 aa9.99□□□□□ -0.81
GAPVD1-219ENST00000495955 PALMO75781 387 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 TCP1P17987 556 aaKnown RBP9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 TUBB2AQ13885 445 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 PSMD5Q16401 504 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 ANKLE1Q8NAG6 615 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 DIS3LQ8TF46 1054 aaKnown RBP9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 KAT2BQ92831 832 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 TSPAN18Q96SJ8 248 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 GAS2L1Q99501 681 aaPredicted RBP9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 TUBB2BQ9BVA1 445 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.98□□□□□ -0.814e-6■■□□□ 12.1
GAPVD1-219ENST00000495955 DERAQ9Y315 318 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 XYLBO75191 536 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 CKMP06732 381 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 PFKMP08237 780 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 MBL2P11226 248 aaPredicted RBP9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 CCDC130P13994 396 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 CXCR5P32302 372 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 CREMQ03060 361 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 SLC18A3Q16572 532 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 LRRC55Q6ZSA7 311 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 SLC2A14Q8TDB8 520 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 GANCQ8TET4 914 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 METTL5Q9NRN9 209 aaKnown RBP9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 SGK1O00141 431 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 MCF2LO15068 1137 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 ATMINO43313 823 aaPredicted RBP9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 BDNFP23560 247 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 RWDD2BP57060 319 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 BST2Q10589 180 aaKnown RBP9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 SNX1Q13596 522 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 SMARCD1Q96GM5 515 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 MFSD14AQ96MC6 490 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 TSNARE1Q96NA8 513 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 NTPCRQ9BSD7 190 aaKnown RBP9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 DONSONQ9NYP3 566 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 TSPAN16Q9UKR8 245 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 HPCAL4Q9UM19 191 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 F8VZ95 297 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 ADH1AP07327 375 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 CLCNKBP51801 687 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 DEUP1Q05D60 604 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 NCAPHQ15003 741 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 DARS2Q6PI48 645 aaKnown RBP9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 MIB1Q86YT6 1006 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 GRK7Q8WTQ7 553 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 TTPALQ9BTX7 342 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 APOL5Q9BWW9 433 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 RWDD3Q9Y3V2 267 aa9.98□□□□□ -0.81
GAPVD1-219ENST00000495955 EIF3CLB5ME19 914 aaKnown RBP9.97□□□□□ -0.81
GAPVD1-219ENST00000495955 IQCF3P0C7M6 154 aa9.97□□□□□ -0.81
GAPVD1-219ENST00000495955 TUFMP49411 452 aaKnown RBP9.97□□□□□ -0.81
GAPVD1-219ENST00000495955 HARS2P49590 506 aaKnown RBP9.97□□□□□ -0.81
GAPVD1-219ENST00000495955 CDR2Q01850 454 aa9.97□□□□□ -0.81
GAPVD1-219ENST00000495955 PRPSAP1Q14558 356 aa9.97□□□□□ -0.81
GAPVD1-219ENST00000495955 SNX27Q96L92 541 aa9.97□□□□□ -0.81
GAPVD1-219ENST00000495955 EIF3CQ99613 913 aaKnown RBP9.97□□□□□ -0.81
GAPVD1-219ENST00000495955 FUCA2Q9BTY2 467 aa9.97□□□□□ -0.81
GAPVD1-219ENST00000495955 DOCK1Q14185 1865 aa9.97□□□□□ -0.81
GAPVD1-219ENST00000495955 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.97□□□□□ -0.81
GAPVD1-219ENST00000495955 GALCP54803 685 aa9.97□□□□□ -0.81
GAPVD1-219ENST00000495955 MAPK7Q13164 816 aa9.97□□□□□ -0.81
GAPVD1-219ENST00000495955 TARBP2Q15633 366 aaKnown RBP9.97□□□□□ -0.81
GAPVD1-219ENST00000495955 C2CD6Q53TS8 623 aa9.97□□□□□ -0.81
GAPVD1-219ENST00000495955 C12orf56Q8IXR9 622 aa9.97□□□□□ -0.81
GAPVD1-219ENST00000495955 SPON2Q9BUD6 331 aa9.97□□□□□ -0.81
GAPVD1-219ENST00000495955 KIAA1551Q9HCM1 1747 aa9.97□□□□□ -0.81
GAPVD1-219ENST00000495955 PPANQ9NQ55 473 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms