RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 BCL7CQ8WUZ0 217 aaPredicted RBP13.27□□□□□ -0.29
SNX17-208ENST00000493711 PIK3R5Q8WYR1 880 aa13.27□□□□□ -0.29
SNX17-208ENST00000493711 ACBD6Q9BR61 282 aa13.27□□□□□ -0.29
SNX17-208ENST00000493711 NT5C1AQ9BXI3 368 aa13.27□□□□□ -0.29
SNX17-208ENST00000493711 TTYH3Q9C0H2 523 aa13.27□□□□□ -0.29
SNX17-208ENST00000493711 LMAN2LQ9H0V9 348 aa13.27□□□□□ -0.29
SNX17-208ENST00000493711 SMYD3Q9H7B4 428 aa13.27□□□□□ -0.29
SNX17-208ENST00000493711 CHST7Q9NS84 486 aa13.27□□□□□ -0.29
SNX17-208ENST00000493711 CNTN6Q9UQ52 1028 aa13.27□□□□□ -0.29
SNX17-208ENST00000493711 PCDHGA4Q9Y5G9 962 aa13.27□□□□□ -0.29
SNX17-208ENST00000493711 FHOD1Q9Y613 1164 aa13.27□□□□□ -0.29
SNX17-208ENST00000493711 A8MXQ7 604 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 F8VZ95 297 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 F8W810 466 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 H3BNC9 293 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 LRRN2O75325 713 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 CILPO75339 1184 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 PAEPP09466 180 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 FOXK1P85037 733 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 TSPY1Q01534 308 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 DSG1Q02413 1049 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 SMARCB1Q12824 385 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 MRPL58Q14197 206 aaKnown RBP13.26□□□□□ -0.29
SNX17-208ENST00000493711 ARHGAP44Q17R89 818 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 SCARA3Q6AZY7 606 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 TMEM173Q86WV6 379 aaPredicted RBP13.26□□□□□ -0.29
SNX17-208ENST00000493711 CEP57Q86XR8 500 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 FAM71AQ8IYT1 594 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 DCP1BQ8IZD4 617 aaKnown RBP13.26□□□□□ -0.29
SNX17-208ENST00000493711 VPS52Q8N1B4 723 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 TMEM130Q8N3G9 435 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 UBR7Q8N806 425 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 KBTBD7Q8WVZ9 684 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 KREMEN1Q96MU8 473 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 C17orf80Q9BSJ5 609 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 NGRNQ9NPE2 291 aaKnown RBP13.26□□□□□ -0.29
SNX17-208ENST00000493711 NLRC4Q9NPP4 1024 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.26□□□□□ -0.29
SNX17-208ENST00000493711 MRPL17Q9NRX2 175 aaKnown RBP13.26□□□□□ -0.29
SNX17-208ENST00000493711 ZNHIT6Q9NWK9 470 aaKnown RBP13.26□□□□□ -0.29
SNX17-208ENST00000493711 CDH9Q9ULB4 789 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 PCDHB4Q9Y5E5 795 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 BACE2Q9Y5Z0 518 aa13.26□□□□□ -0.29
SNX17-208ENST00000493711 AKR1B15C9JRZ8 316 aaPredicted RBP13.25□□□□□ -0.29
SNX17-208ENST00000493711 I3L4J1 428 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 EPHB6O15197 1021 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 C1RP00736 705 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 GYPCP04921 128 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 CTSAP10619 480 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 KRT5P13647 590 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 FERP16591 822 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 CD58P19256 250 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 ACO1P21399 889 aaKnown RBP13.25□□□□□ -0.29
SNX17-208ENST00000493711 TKTP29401 623 aaKnown RBP13.25□□□□□ -0.29
SNX17-208ENST00000493711 SOX5P35711 763 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 PBX2P40425 430 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 JAM2P57087 298 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 GSDMDP57764 484 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 PTK2Q05397 1052 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 TBX2Q13207 712 aaPredicted RBP13.25□□□□□ -0.29
SNX17-208ENST00000493711 GPM6BQ13491 265 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 STILQ15468 1287 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 CTXN3Q4LDR2 81 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 SFMBT2Q5VUG0 894 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 GJB7Q6PEY0 223 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 TMEM270Q6UE05 265 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 CRYBG2Q8N1P7 616 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 RBBP8NLQ8NC74 664 aaPredicted RBP13.25□□□□□ -0.29
SNX17-208ENST00000493711 OR8K1Q8NGG5 319 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 SPPL3Q8TCT6 385 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 RIN2Q8WYP3 895 aaPredicted RBP13.25□□□□□ -0.29
SNX17-208ENST00000493711 TMEM176AQ96HP8 235 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 ARID3AQ99856 593 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 MRPL45Q9BRJ2 306 aaKnown RBP13.25□□□□□ -0.29
SNX17-208ENST00000493711 PRDM6Q9NQX0 595 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 DDX43Q9NXZ2 648 aaKnown RBP13.25□□□□□ -0.29
SNX17-208ENST00000493711 FNIP2Q9P278 1114 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 MAFFQ9ULX9 164 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 IRAK3Q9Y616 596 aa13.25□□□□□ -0.29
SNX17-208ENST00000493711 BZW2Q9Y6E2 419 aaKnown RBP13.25□□□□□ -0.29
SNX17-208ENST00000493711 FOXN3O00409 490 aaPredicted RBP13.24□□□□□ -0.29
SNX17-208ENST00000493711 IGFBP6P24592 240 aaPredicted RBP13.24□□□□□ -0.29
SNX17-208ENST00000493711 CASP14P31944 242 aa13.24□□□□□ -0.29
SNX17-208ENST00000493711 KRT9P35527 623 aa13.24□□□□□ -0.29
SNX17-208ENST00000493711 USP8P40818 1118 aa13.24□□□□□ -0.29
SNX17-208ENST00000493711 NDST1P52848 882 aa13.24□□□□□ -0.29
SNX17-208ENST00000493711 CDH8P55286 799 aa13.24□□□□□ -0.29
SNX17-208ENST00000493711 APBA1Q02410 837 aa13.24□□□□□ -0.29
SNX17-208ENST00000493711 SMC1AQ14683 1233 aaKnown RBP13.24□□□□□ -0.29
SNX17-208ENST00000493711 ARID5BQ14865 1188 aa13.24□□□□□ -0.29
SNX17-208ENST00000493711 PSMD5Q16401 504 aa13.24□□□□□ -0.29
SNX17-208ENST00000493711 PTPROQ16827 1216 aa13.24□□□□□ -0.29
SNX17-208ENST00000493711 KIAA0319Q5VV43 1072 aa13.24□□□□□ -0.29
SNX17-208ENST00000493711 TMC7Q7Z402 723 aa13.24□□□□□ -0.29
SNX17-208ENST00000493711 CPLX3Q8WVH0 158 aa13.24□□□□□ -0.29
SNX17-208ENST00000493711 BAP1Q92560 729 aa13.24□□□□□ -0.29
SNX17-208ENST00000493711 KAT5Q92993 513 aa13.24□□□□□ -0.29
SNX17-208ENST00000493711 DNAJC7Q99615 494 aa13.24□□□□□ -0.29
SNX17-208ENST00000493711 VN1R3Q9BXE9 311 aa13.24□□□□□ -0.29
SNX17-208ENST00000493711 EMILIN2Q9BXX0 1053 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms