RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 XRCC6P12956 609 aaKnown RBP eCLIP6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 MYF5P13349 255 aa6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 AVPR1BP47901 424 aa6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 NPTX2P47972 431 aa6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 UCP3P55916 312 aa6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 BLOC1S1P78537 153 aa6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 PURAQ00577 322 aaKnown RBP6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 HLXQ14774 488 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 IQCB1Q15051 598 aa6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 SAFBQ15424 915 aaKnown RBP eCLIP6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 CNGA2Q16280 664 aa6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 SP5Q6BEB4 398 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 MICALCLQ6ZW33 695 aa6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 PPP1R32Q7Z5V6 425 aa6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 ADGRG5Q8IZF4 528 aa6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 SLC15A4Q8N697 577 aa6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 DNAJC5GQ8N7S2 189 aa6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 POC1BQ8TC44 478 aa6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 APIPQ96GX9 242 aa6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 SLC46A1Q96NT5 459 aa6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 UNKLQ9H9P5 680 aaKnown RBP6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 MRPS18AQ9NVS2 196 aaKnown RBP6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 ZSCAN32Q9NX65 697 aa6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 ETAA1Q9NY74 926 aa6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 XPR1Q9UBH6 696 aa6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 CPNE7Q9UBL6 633 aa6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 HESX1Q9UBX0 185 aa6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 AFF4Q9UHB7 1163 aaKnown RBP6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 HS3ST4Q9Y661 456 aa6.02□□□□□ -1.45
HMGB1P38-201ENST00000490557 USP19O94966 1318 aa6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 A0A0B4J269 797 aa6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 MYO1FO00160 1098 aa6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 PLIN1O60240 522 aa6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 FSHBP01225 129 aa6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 ATXN1LP0C7T5 689 aaKnown RBP6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 CYP2C9P11712 490 aa6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 FDXRP22570 491 aa6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 GCLCP48506 637 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 SLC11A2P49281 568 aa6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 NDUFV1P49821 464 aa6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 TCF15Q12870 199 aa6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 TUBB3Q13509 450 aa6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 SEMA5AQ13591 1074 aa6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 GALEQ14376 348 aa6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 LCE1DQ5T752 114 aa6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 CCSAPQ6IQ19 270 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 SUPT20HQ8NEM7 779 aa6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 ASB10Q8WXI3 467 aa6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 CAVIN3Q969G5 261 aa6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 SPATA5L1Q9BVQ7 753 aa6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 APOL5Q9BWW9 433 aa6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 ZNF518BQ9C0D4 1074 aa6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 DDX21Q9NR30 783 aaKnown RBP eCLIP6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 SHOC2Q9UQ13 582 aa6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.01□□□□□ -1.45
HMGB1P38-201ENST00000490557 PIPSLA2A3N6 862 aa6□□□□□ -1.45
HMGB1P38-201ENST00000490557 TMEM191CA6NGB0 347 aa6□□□□□ -1.45
HMGB1P38-201ENST00000490557 ZFPL1O95159 310 aa6□□□□□ -1.45
HMGB1P38-201ENST00000490557 HKR1P10072 659 aa6□□□□□ -1.45
HMGB1P38-201ENST00000490557 TRIM27P14373 513 aa6□□□□□ -1.45
HMGB1P38-201ENST00000490557 RPL17P18621 184 aaKnown RBP6□□□□□ -1.45
HMGB1P38-201ENST00000490557 CD6P30203 668 aa6□□□□□ -1.45
HMGB1P38-201ENST00000490557 ZEB1P37275 1124 aaPredicted RBP6□□□□□ -1.45
HMGB1P38-201ENST00000490557 VIPR2P41587 438 aa6□□□□□ -1.45
HMGB1P38-201ENST00000490557 PXNP49023 591 aaPredicted RBP6□□□□□ -1.45
HMGB1P38-201ENST00000490557 ARFIP2P53365 341 aa6□□□□□ -1.45
HMGB1P38-201ENST00000490557 KRT17Q04695 432 aa6□□□□□ -1.45
HMGB1P38-201ENST00000490557 CTBP1Q13363 440 aa6□□□□□ -1.45
HMGB1P38-201ENST00000490557 IGFL4Q6B9Z1 124 aa6□□□□□ -1.45
HMGB1P38-201ENST00000490557 TMEM108Q6UXF1 575 aa6□□□□□ -1.45
HMGB1P38-201ENST00000490557 GPR149Q86SP6 731 aa6□□□□□ -1.45
HMGB1P38-201ENST00000490557 FAM9AQ8IZU1 332 aaPredicted RBP6□□□□□ -1.45
HMGB1P38-201ENST00000490557 Q8NA96 180 aa6□□□□□ -1.45
HMGB1P38-201ENST00000490557 B3GALNT2Q8NCR0 500 aa6□□□□□ -1.45
HMGB1P38-201ENST00000490557 FBXO41Q8TF61 875 aa6□□□□□ -1.45
HMGB1P38-201ENST00000490557 LRIG1Q96JA1 1093 aa6□□□□□ -1.45
HMGB1P38-201ENST00000490557 TPSD1Q9BZJ3 242 aa6□□□□□ -1.45
HMGB1P38-201ENST00000490557 SMOC2Q9H3U7 446 aa6□□□□□ -1.45
HMGB1P38-201ENST00000490557 VSX1Q9NZR4 365 aaPredicted RBP6□□□□□ -1.45
HMGB1P38-201ENST00000490557 DKK2Q9UBU2 259 aa6□□□□□ -1.45
HMGB1P38-201ENST00000490557 SPATA31A3Q5VYP0 1347 aa5.99□□□□□ -1.45
HMGB1P38-201ENST00000490557 RHPN2P1A8MT19 583 aa5.99□□□□□ -1.45
HMGB1P38-201ENST00000490557 LOXL3P58215 753 aa5.99□□□□□ -1.45
HMGB1P38-201ENST00000490557 FMO1Q01740 532 aa5.99□□□□□ -1.45
HMGB1P38-201ENST00000490557 TAP1Q03518 808 aa5.99□□□□□ -1.45
HMGB1P38-201ENST00000490557 CCDC146Q8IYE0 955 aa5.99□□□□□ -1.45
HMGB1P38-201ENST00000490557 SLC44A3Q8N4M1 653 aa5.99□□□□□ -1.45
HMGB1P38-201ENST00000490557 TOR1AIP2Q8NFQ8 470 aa5.99□□□□□ -1.45
HMGB1P38-201ENST00000490557 PJA1Q8NG27 643 aa5.99□□□□□ -1.45
HMGB1P38-201ENST00000490557 SSH3Q8TE77 659 aa5.99□□□□□ -1.45
HMGB1P38-201ENST00000490557 AIFM2Q9BRQ8 373 aa5.99□□□□□ -1.45
HMGB1P38-201ENST00000490557 MS4A7Q9GZW8 240 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P38-201ENST00000490557 BTBD1Q9H0C5 482 aa5.99□□□□□ -1.45
HMGB1P38-201ENST00000490557 A1CFQ9NQ94 594 aaKnown RBP5.99□□□□□ -1.45
HMGB1P38-201ENST00000490557 FOXN3O00409 490 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 PEX1O43933 1283 aa5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 RASSF9O75901 435 aa5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 PHKG2P15735 406 aa5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 GATA3P23771 443 aa5.98□□□□□ -1.45
HMGB1P38-201ENST00000490557 WNT3P56703 355 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms