RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 SMYD2Q9NRG4 433 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 TMEM160Q9NX00 188 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 CROTQ9UKG9 612 aa6.08□□□□□ -1.44
COPA-203ENST00000481040 ZMYND8Q9ULU4 1186 aaPredicted RBP6.08□□□□□ -1.44
COPA-203ENST00000481040 A0A087X0M5 115 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 A0A1B0GX30 115 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 C2orf78A6NCI8 922 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 OR14I1A6ND48 311 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 RAB27BO00194 218 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 USP1O94782 785 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 INMTO95050 263 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 ACVR2AP27037 513 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 RAD52P43351 418 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 AARSP49588 968 aaKnown RBP eCLIP6.07□□□□□ -1.44
COPA-203ENST00000481040 CCR5P51681 352 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 SEC24CP53992 1094 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 ACTR2P61160 394 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 PSMC1P62191 440 aaKnown RBP6.07□□□□□ -1.44
COPA-203ENST00000481040 AP2B1P63010 937 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 ADAM15Q13444 863 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 SMAD4Q13485 552 aaKnown RBP6.07□□□□□ -1.44
COPA-203ENST00000481040 SLC12A1Q13621 1099 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 SLC29A2Q14542 456 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 CCDC184Q52MB2 194 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.07□□□□□ -1.44
COPA-203ENST00000481040 LCE4AQ5TA78 99 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 RAP1GAP2Q684P5 730 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 OTUD7BQ6GQQ9 843 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 ZDHHC24Q6UX98 284 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 KRT77Q7Z794 578 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 KRT73Q86Y46 540 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 PDSS2Q86YH6 399 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 SLC44A2Q8IWA5 706 aaPredicted RBP6.07□□□□□ -1.44
COPA-203ENST00000481040 ZDHHC14Q8IZN3 488 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 TCP11L2Q8N4U5 519 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 SCAMP5Q8TAC9 235 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 RFFLQ8WZ73 363 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 FAM168AQ92567 244 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 SDCCAG3Q96C92 435 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 RSRC1Q96IZ7 334 aaKnown RBP6.07□□□□□ -1.44
COPA-203ENST00000481040 NUDT16L1Q9BRJ7 211 aaKnown RBP6.07□□□□□ -1.44
COPA-203ENST00000481040 MS4A7Q9GZW8 240 aaPredicted RBP6.07□□□□□ -1.44
COPA-203ENST00000481040 KATNBL1Q9H079 304 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 TAF1DQ9H5J8 278 aaPredicted RBP6.07□□□□□ -1.44
COPA-203ENST00000481040 PCDH18Q9HCL0 1135 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 PRDM8Q9NQV8 689 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 HELLSQ9NRZ9 838 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.07□□□□□ -1.44
COPA-203ENST00000481040 LPAR3Q9UBY5 353 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 SLC23A1Q9UHI7 598 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 CTNND2Q9UQB3 1225 aa6.07□□□□□ -1.44
COPA-203ENST00000481040 CCDC196A0A1B0GTZ2 297 aa6.06□□□□□ -1.44
COPA-203ENST00000481040 TCRBV7S2A1N4TA0A589 114 aa6.06□□□□□ -1.44
COPA-203ENST00000481040 FSD2A1L4K1 749 aa6.06□□□□□ -1.44
COPA-203ENST00000481040 ZNF785A8K8V0 405 aa6.06□□□□□ -1.44
COPA-203ENST00000481040 KIAA0391O15091 583 aaKnown RBP6.06□□□□□ -1.44
COPA-203ENST00000481040 GLP2RO95838 553 aa6.06□□□□□ -1.44
COPA-203ENST00000481040 ZSCAN22P10073 491 aaPredicted RBP6.06□□□□□ -1.44
COPA-203ENST00000481040 CKBP12277 381 aa6.06□□□□□ -1.44
COPA-203ENST00000481040 MC3RP41968 323 aa6.06□□□□□ -1.44
COPA-203ENST00000481040 CLNS1AP54105 237 aaKnown RBP6.06□□□□□ -1.44
COPA-203ENST00000481040 NAP1L1P55209 391 aaKnown RBP6.06□□□□□ -1.44
COPA-203ENST00000481040 CHRNDQ07001 517 aa6.06□□□□□ -1.44
COPA-203ENST00000481040 TOP3AQ13472 1001 aaPredicted RBP6.06□□□□□ -1.44
COPA-203ENST00000481040 ZNF827Q17R98 1081 aa6.06□□□□□ -1.44
COPA-203ENST00000481040 TRIM71Q2Q1W2 868 aaKnown RBP6.06□□□□□ -1.44
COPA-203ENST00000481040 FAM133BQ5BKY9 247 aaKnown RBP6.06□□□□□ -1.44
COPA-203ENST00000481040 FAM47AQ5JRC9 791 aa6.06□□□□□ -1.44
COPA-203ENST00000481040 TSHZ3Q63HK5 1081 aa6.06□□□□□ -1.44
COPA-203ENST00000481040 TRIM68Q6AZZ1 485 aa6.06□□□□□ -1.44
COPA-203ENST00000481040 SEM1Q6ZVN7 128 aa6.06□□□□□ -1.44
COPA-203ENST00000481040 CCDC28AQ8IWP9 274 aa6.06□□□□□ -1.44
COPA-203ENST00000481040 RTKN2Q8IZC4 609 aa6.06□□□□□ -1.44
COPA-203ENST00000481040 SMARCC2Q8TAQ2 1214 aa6.06□□□□□ -1.44
COPA-203ENST00000481040 DDX17Q92841 729 aaKnown RBP6.06□□□□□ -1.44
COPA-203ENST00000481040 TREX2Q9BQ50 279 aaPredicted RBP6.06□□□□□ -1.44
COPA-203ENST00000481040 RTKNQ9BST9 563 aa6.06□□□□□ -1.44
COPA-203ENST00000481040 KRTAP4-7Q9BYR0 210 aa6.06□□□□□ -1.44
COPA-203ENST00000481040 AGXT2Q9BYV1 514 aa6.06□□□□□ -1.44
COPA-203ENST00000481040 PRKRIP1Q9H875 184 aaPredicted RBP6.06□□□□□ -1.44
COPA-203ENST00000481040 GPR35Q9HC97 309 aa6.06□□□□□ -1.44
COPA-203ENST00000481040 JKAMPQ9P055 326 aa6.06□□□□□ -1.44
COPA-203ENST00000481040 XPR1Q9UBH6 696 aa6.06□□□□□ -1.44
COPA-203ENST00000481040 CAPN11Q9UMQ6 739 aa6.06□□□□□ -1.44
COPA-203ENST00000481040 RBM8AQ9Y5S9 174 aaKnown RBP6.06□□□□□ -1.44
COPA-203ENST00000481040 A0A1W2PPH5 198 aa6.05□□□□□ -1.44
COPA-203ENST00000481040 DNPH1O43598 174 aa6.05□□□□□ -1.44
COPA-203ENST00000481040 ZBED4O75132 1171 aa6.05□□□□□ -1.44
COPA-203ENST00000481040 HMGCRP04035 888 aa6.05□□□□□ -1.44
COPA-203ENST00000481040 TK1P04183 234 aa6.05□□□□□ -1.44
COPA-203ENST00000481040 PRKCBP05771 671 aa6.05□□□□□ -1.44
COPA-203ENST00000481040 PECAM1P16284 738 aaPredicted RBP6.05□□□□□ -1.44
COPA-203ENST00000481040 RXRAP19793 462 aa6.05□□□□□ -1.44
COPA-203ENST00000481040 SLC6A4P31645 630 aa6.05□□□□□ -1.44
COPA-203ENST00000481040 ETV4P43268 484 aa6.05□□□□□ -1.44
COPA-203ENST00000481040 CPT1AP50416 773 aa6.05□□□□□ -1.44
COPA-203ENST00000481040 ATXN1P54253 815 aaKnown RBP6.05□□□□□ -1.44
COPA-203ENST00000481040 SLC5A9Q2M3M2 681 aa6.05□□□□□ -1.44
COPA-203ENST00000481040 AMOTQ4VCS5 1084 aa6.05□□□□□ -1.44
COPA-203ENST00000481040 CRB2Q5IJ48 1285 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms