RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 NECTIN4Q96NY8 510 aa11.59□□□□□ -0.55
ATG4B-219ENST00000479941 NAT10Q9H0A0 1025 aaKnown RBP11.59□□□□□ -0.55
ATG4B-219ENST00000479941 SNX25Q9H3E2 840 aa11.59□□□□□ -0.55
ATG4B-219ENST00000479941 CYP4F11Q9HBI6 524 aa11.59□□□□□ -0.55
ATG4B-219ENST00000479941 HSFX1Q9UBD0 423 aa11.59□□□□□ -0.55
ATG4B-219ENST00000479941 MAGEC2Q9UBF1 373 aaPredicted RBP11.59□□□□□ -0.55
ATG4B-219ENST00000479941 NFE2L3Q9Y4A8 694 aa11.59□□□□□ -0.55
ATG4B-219ENST00000479941 TSC2P49815 1807 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 TTC28Q96AY4 2481 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 PLXNA3P51805 1871 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 CCDC195A0A1B0GUA6 201 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 MTMR11A4FU01 709 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 PRRG1O14668 218 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 RFPL2O75678 378 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 POU2F2P09086 479 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 HNRNPA1P09651 372 aaKnown RBP eCLIP11.58□□□□□ -0.56
ATG4B-219ENST00000479941 PRKCSHP14314 528 aaPredicted RBP11.58□□□□□ -0.56
ATG4B-219ENST00000479941 MTHFRP42898 656 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 MTIF2P46199 727 aaKnown RBP11.58□□□□□ -0.56
ATG4B-219ENST00000479941 KCNQ1P51787 676 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 ADCY1Q08828 1119 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 MAPRE1Q15691 268 aaKnown RBP11.58□□□□□ -0.56
ATG4B-219ENST00000479941 SMAD2Q15796 467 aaKnown RBP11.58□□□□□ -0.56
ATG4B-219ENST00000479941 INTS6LQ5JSJ4 861 aaKnown RBP11.58□□□□□ -0.56
ATG4B-219ENST00000479941 TJAP1Q5JTD0 557 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 PPM1LQ5SGD2 360 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 ATAT1Q5SQI0 421 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 SPOPLQ6IQ16 392 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 C11orf57Q6ZUT1 292 aaPredicted RBP11.58□□□□□ -0.56
ATG4B-219ENST00000479941 GPR149Q86SP6 731 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 OR6B3Q8NGW1 331 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 SPPL2BQ8TCT7 592 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 SUSD6Q92537 303 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 SEMA4DQ92854 862 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 RIPOR3Q96MK2 946 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 TMEM209Q96SK2 561 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 MRPL45Q9BRJ2 306 aaKnown RBP11.58□□□□□ -0.56
ATG4B-219ENST00000479941 PI4K2AQ9BTU6 479 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 APOL5Q9BWW9 433 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 PRKD2Q9BZL6 878 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 NIF3L1Q9GZT8 377 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 DNAJC25Q9H1X3 360 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 CYP3A43Q9HB55 503 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 CDH9Q9ULB4 789 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 POLIQ9UNA4 740 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 USP15Q9Y4E8 981 aaPredicted RBP11.58□□□□□ -0.56
ATG4B-219ENST00000479941 MTCL1Q9Y4B5 1905 aaKnown RBP11.58□□□□□ -0.56
ATG4B-219ENST00000479941 NCOR1O75376 2440 aa11.58□□□□□ -0.56
ATG4B-219ENST00000479941 BDP1A6H8Y1 2624 aa11.57□□□□□ -0.56
ATG4B-219ENST00000479941 SYCE3A1L190 88 aa11.57□□□□□ -0.56
ATG4B-219ENST00000479941 A8MXQ7 604 aa11.57□□□□□ -0.56
ATG4B-219ENST00000479941 XYLBO75191 536 aa11.57□□□□□ -0.56
ATG4B-219ENST00000479941 SEC24AO95486 1093 aa11.57□□□□□ -0.56
ATG4B-219ENST00000479941 LRG1P02750 347 aa11.57□□□□□ -0.56
ATG4B-219ENST00000479941 BMP1P13497 986 aa11.57□□□□□ -0.56
ATG4B-219ENST00000479941 ACAT1P24752 427 aaKnown RBP11.57□□□□□ -0.56
ATG4B-219ENST00000479941 LMO2P25791 158 aa11.57□□□□□ -0.56
ATG4B-219ENST00000479941 EEF1GP26641 437 aaKnown RBP11.57□□□□□ -0.56
ATG4B-219ENST00000479941 ASPAP45381 313 aa11.57□□□□□ -0.56
ATG4B-219ENST00000479941 MYL5Q02045 173 aa11.57□□□□□ -0.56
ATG4B-219ENST00000479941 CBX2Q14781 532 aaPredicted RBP11.57□□□□□ -0.56
ATG4B-219ENST00000479941 NFKBIBQ15653 356 aa11.57□□□□□ -0.56
ATG4B-219ENST00000479941 ANO6Q4KMQ2 910 aa11.57□□□□□ -0.56
ATG4B-219ENST00000479941 SCARA5Q6ZMJ2 495 aa11.57□□□□□ -0.56
ATG4B-219ENST00000479941 LRRTM3Q86VH5 581 aa11.57□□□□□ -0.56
ATG4B-219ENST00000479941 UNC93AQ86WB7 457 aa11.57□□□□□ -0.56
ATG4B-219ENST00000479941 TTC39CQ8N584 583 aa11.57□□□□□ -0.56
ATG4B-219ENST00000479941 ZNF707Q96C28 371 aaPredicted RBP11.57□□□□□ -0.56
ATG4B-219ENST00000479941 PGLYRP2Q96PD5 576 aa11.57□□□□□ -0.56
ATG4B-219ENST00000479941 BPIFA3Q9BQP9 254 aa11.57□□□□□ -0.56
ATG4B-219ENST00000479941 SYT15Q9BQS2 421 aa11.57□□□□□ -0.56
ATG4B-219ENST00000479941 BCO2Q9BYV7 579 aa11.57□□□□□ -0.56
ATG4B-219ENST00000479941 FAM124BQ9H5Z6 455 aaPredicted RBP11.57□□□□□ -0.56
ATG4B-219ENST00000479941 SMYD3Q9H7B4 428 aa11.57□□□□□ -0.56
ATG4B-219ENST00000479941 APOBEC3GQ9HC16 384 aaKnown RBP11.57□□□□□ -0.56
ATG4B-219ENST00000479941 SAMSN1Q9NSI8 373 aaKnown RBP11.57□□□□□ -0.56
ATG4B-219ENST00000479941 PCDHB5Q9Y5E4 795 aa11.57□□□□□ -0.56
ATG4B-219ENST00000479941 INSL5Q9Y5Q6 135 aa11.57□□□□□ -0.56
ATG4B-219ENST00000479941 KCNJ18B7U540 433 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 LRRN2O75325 713 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 VNN2O95498 520 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 PDGFRBP09619 1106 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 IL9P15248 144 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 TRIM21P19474 475 aaKnown RBP11.56□□□□□ -0.56
ATG4B-219ENST00000479941 RAP1GAPP47736 663 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 TUFMP49411 452 aaKnown RBP11.56□□□□□ -0.56
ATG4B-219ENST00000479941 CDH8P55286 799 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 INCA1Q0VD86 236 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 DUSP4Q13115 394 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 PLD1Q13393 1074 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 KCNJ12Q14500 433 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 MAN2A1Q16706 1144 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 CFAP221Q4G0U5 840 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 TCP11X2Q5H9J9 407 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 CDKAL1Q5VV42 579 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 FAM171BQ6P995 826 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 C4orf50Q6ZRC1 276 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 ATAD1Q8NBU5 361 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 EHBP1Q8NDI1 1231 aa11.56□□□□□ -0.56
ATG4B-219ENST00000479941 SMG7Q92540 1137 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 208.5 ms