RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 GPC6Q9Y625 555 aaPredicted RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 TNKSO95271 1327 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 K7ENM7 598 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 BTN3A3O00478 584 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 COPEO14579 308 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 GCATO75600 419 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 ABCB4P21439 1286 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 IL12AP29459 219 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 MAPK6Q16659 721 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 NFRKBQ6P4R8 1299 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 CHST3Q7LGC8 479 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 RAPGEF5Q92565 580 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 GAL3ST3Q96A11 431 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 FAM162AQ96A26 154 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 Q96MT0 163 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 USP28Q96RU2 1077 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 SAP130Q9H0E3 1048 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 PABPC3Q9H361 631 aaKnown RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 ZBTB40Q9NUA8 1239 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 INPP4BO15327 924 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 DHX15O43143 795 aaKnown RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 RBMXL2O75526 392 aaKnown RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 RPS6KA4O75676 772 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 ACADMP11310 421 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 TNNI3P19429 210 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 MAGEA1P43355 309 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 PHKA2P46019 1235 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 FASTKD3Q14CZ7 662 aaKnown RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 EIF5AL1Q6IS14 154 aaKnown RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 LINC00523Q86TU6 105 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 ETNPPLQ8TBG4 499 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 C15orf40Q8WUR7 153 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 GPN1Q9HCN4 374 aaPredicted RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 SLC38A7Q9NVC3 462 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 IGF2BP3O00425 579 aaKnown RBP eCLIP5.64□□□□□ -1.51
USF3-202ENST00000478658 SRGAP2O75044 1071 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 PTPN3P26045 913 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 MAPK4P31152 587 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 RGS1Q08116 209 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 TRAPPC3LQ5T215 181 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 SULT6B1Q6IMI4 303 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 MINDY2Q8NBR6 621 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 POC1BQ8TC44 478 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 C7orf50Q9BRJ6 194 aaKnown RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 EPB41L4BQ9H329 900 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 PTPRKQ15262 1439 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 H3BNH8 94 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 CD3EAPO15446 510 aaKnown RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 HOXA2O43364 376 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 MED26O95402 600 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 FDX1P10109 184 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 CCNA2P20248 432 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 BAG6P46379 1132 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 JAK3P52333 1124 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 ARPC4P59998 168 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 PSMC5P62195 406 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 NSUN2Q08J23 767 aaKnown RBP eCLIP5.64□□□□□ -1.51
USF3-202ENST00000478658 HSDL1Q3SXM5 330 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 ATP13A4Q4VNC1 1196 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 SAMD4BQ5PRF9 694 aaKnown RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 SPATA21Q7Z572 469 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 PARP8Q8N3A8 854 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 GIPC3Q8TF64 312 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 IL17RAQ96F46 866 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 VMP1Q96GC9 406 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 KCNK16Q96T55 309 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 CCDC28BQ9BUN5 200 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 SENP6Q9GZR1 1112 aaPredicted RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 TIGARQ9NQ88 270 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 NDFIP2Q9NV92 336 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 TUBA8Q9NY65 449 aaPredicted RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 MROH5Q6ZUA9 1318 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 WASHC1A8K0Z3 465 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 WASH3PC4AMC7 463 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 SCAF4O95104 1147 aaKnown RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 S100A2P29034 98 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 TRAPPC10P48553 1259 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 CASP4P49662 377 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 TAF6P49848 677 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 SMIM11AP58511 58 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 STXBP1P61764 594 aaKnown RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 TUBA4AP68366 448 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 RHAGQ02094 409 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 FAM69CQ0P6D2 419 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 WASH2PQ6VEQ5 465 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 PIK3AP1Q6ZUJ8 805 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 LONP2Q86WA8 852 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 CKAP2Q8WWK9 683 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 ELMO1Q92556 727 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 MCRS1Q96EZ8 462 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 AHCYL2Q96HN2 611 aaKnown RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 BTBD9Q96Q07 612 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 FTOQ9C0B1 505 aaKnown RBP eCLIP5.64□□□□□ -1.51
USF3-202ENST00000478658 KAT8Q9H7Z6 458 aaKnown RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 SRP68Q9UHB9 627 aaKnown RBP5.64□□□□□ -1.51
USF3-202ENST00000478658 ZNF175Q9Y473 711 aa5.64□□□□□ -1.51
USF3-202ENST00000478658 F8W810 466 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 GNPATO15228 680 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 ZNF208O43345 1280 aa5.63□□□□□ -1.51
USF3-202ENST00000478658 TLR2O60603 784 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms