RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 ATG4AQ8WYN0 398 aa12.47□□□□□ -0.41
SGSM3-209ENST00000478085 CARD9Q9H257 536 aa12.47□□□□□ -0.41
SGSM3-209ENST00000478085 DUOX1Q9NRD9 1551 aa12.46□□□□□ -0.41
SGSM3-209ENST00000478085 H3BRJ5 948 aa12.46□□□□□ -0.41
SGSM3-209ENST00000478085 KCNN4O15554 427 aa12.46□□□□□ -0.41
SGSM3-209ENST00000478085 APOEP02649 317 aa12.46□□□□□ -0.41
SGSM3-209ENST00000478085 NFICP08651 508 aa12.46□□□□□ -0.41
SGSM3-209ENST00000478085 PMS2P54278 862 aa12.46□□□□□ -0.41
SGSM3-209ENST00000478085 PDIA2Q13087 525 aaKnown RBP12.46□□□□□ -0.41
SGSM3-209ENST00000478085 ANKRD20A3Q5VUR7 823 aa12.46□□□□□ -0.41
SGSM3-209ENST00000478085 GSDMBQ8TAX9 411 aa12.46□□□□□ -0.41
SGSM3-209ENST00000478085 SPATA18Q8TC71 538 aa12.46□□□□□ -0.41
SGSM3-209ENST00000478085 MAML3Q96JK9 1138 aa12.46□□□□□ -0.41
SGSM3-209ENST00000478085 APOL1O14791 398 aa12.46□□□□□ -0.41
SGSM3-209ENST00000478085 CA4P22748 312 aa12.46□□□□□ -0.41
SGSM3-209ENST00000478085 NUMBP49757 651 aa12.46□□□□□ -0.41
SGSM3-209ENST00000478085 TPI1P60174 286 aa12.46□□□□□ -0.41
SGSM3-209ENST00000478085 DHX34Q14147 1143 aaKnown RBP12.46□□□□□ -0.41
SGSM3-209ENST00000478085 BMT2Q1RMZ1 405 aa12.46□□□□□ -0.41
SGSM3-209ENST00000478085 CCNI2Q6ZMN8 369 aaPredicted RBP12.46□□□□□ -0.41
SGSM3-209ENST00000478085 CCT6BQ92526 530 aa12.46□□□□□ -0.41
SGSM3-209ENST00000478085 MBOAT7Q96N66 472 aa12.46□□□□□ -0.41
SGSM3-209ENST00000478085 KCND1Q9NSA2 647 aa12.46□□□□□ -0.41
SGSM3-209ENST00000478085 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.46□□□□□ -0.41
SGSM3-209ENST00000478085 TAS2R14Q9NYV8 317 aa12.46□□□□□ -0.41
SGSM3-209ENST00000478085 CASZ1Q86V15 1759 aa12.46□□□□□ -0.42
SGSM3-209ENST00000478085 APRTP07741 180 aa12.46□□□□□ -0.42
SGSM3-209ENST00000478085 ARF4P18085 180 aaPredicted RBP12.46□□□□□ -0.42
SGSM3-209ENST00000478085 NR1D1P20393 614 aa12.46□□□□□ -0.42
SGSM3-209ENST00000478085 NCKAP1LP55160 1127 aa12.46□□□□□ -0.42
SGSM3-209ENST00000478085 SP2Q02086 613 aa12.46□□□□□ -0.42
SGSM3-209ENST00000478085 BFSP2Q13515 415 aa12.46□□□□□ -0.42
SGSM3-209ENST00000478085 SH3D19Q5HYK7 790 aa12.46□□□□□ -0.42
SGSM3-209ENST00000478085 CCDC33Q8N5R6 958 aa12.46□□□□□ -0.42
SGSM3-209ENST00000478085 C9orf72Q96LT7 481 aa12.46□□□□□ -0.42
SGSM3-209ENST00000478085 ZNF112Q9UJU3 913 aa12.46□□□□□ -0.42
SGSM3-209ENST00000478085 CDY2AQ9Y6F7 541 aa12.46□□□□□ -0.42
SGSM3-209ENST00000478085 ITGB4P16144 1822 aa12.46□□□□□ -0.42
SGSM3-209ENST00000478085 NUP188Q5SRE5 1749 aa12.46□□□□□ -0.42
SGSM3-209ENST00000478085 PRRG1O14668 218 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 ZNF131P52739 623 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 FSTL1Q12841 308 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 TDRD10Q5VZ19 366 aaKnown RBP12.45□□□□□ -0.42
SGSM3-209ENST00000478085 VPS52Q8N1B4 723 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 BAP1Q92560 729 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 ZSWIM1Q9BR11 485 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 MLXIPLQ9NP71 852 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 DDIT4Q9NX09 232 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 DMGDHQ9UI17 866 aaKnown RBP12.45□□□□□ -0.42
SGSM3-209ENST00000478085 TSPAN16Q9UKR8 245 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 TNFSF13BQ9Y275 285 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 PLCH1Q4KWH8 1693 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 IRS2Q9Y4H2 1338 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 DFFAO00273 331 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 XPAP23025 273 aaPredicted RBP12.45□□□□□ -0.42
SGSM3-209ENST00000478085 SPIRE1Q08AE8 756 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 BYSLQ13895 437 aaKnown RBP12.45□□□□□ -0.42
SGSM3-209ENST00000478085 CLEC16AQ2KHT3 1053 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 EFHC1Q5JVL4 640 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 DCP1BQ8IZD4 617 aaKnown RBP12.45□□□□□ -0.42
SGSM3-209ENST00000478085 PPTC7Q8NI37 304 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 ARHGEF26Q96DR7 871 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 TMEM169Q96HH4 297 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 EPAS1Q99814 870 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 PLEKHA5Q9HAU0 1116 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 XPNPEP1Q9NQW7 623 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 RAB6BQ9NRW1 208 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.45□□□□□ -0.42
SGSM3-209ENST00000478085 GPATCH2LQ9NWQ4 482 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 KIAA1257Q9ULG3 409 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 LAMB4A4D0S4 1761 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 MYO9BQ13459 2157 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 M0QYT0 321 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 ODC1P11926 461 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 SKIP12755 728 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 ACADSBP45954 432 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 EIF3BP55884 814 aaKnown RBP12.45□□□□□ -0.42
SGSM3-209ENST00000478085 SLC13A5Q86YT5 568 aaPredicted RBP12.45□□□□□ -0.42
SGSM3-209ENST00000478085 JAMLQ86YT9 394 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 SRRM1Q8IYB3 904 aaKnown RBP12.45□□□□□ -0.42
SGSM3-209ENST00000478085 GDAP1Q8TB36 358 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 EPS8L1Q8TE68 723 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 SH3TC2Q8TF17 1288 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 RIN2Q8WYP3 895 aaPredicted RBP12.45□□□□□ -0.42
SGSM3-209ENST00000478085 SNF8Q96H20 258 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 SENP6Q9GZR1 1112 aaPredicted RBP12.45□□□□□ -0.42
SGSM3-209ENST00000478085 DHX33Q9H6R0 707 aaKnown RBP12.45□□□□□ -0.42
SGSM3-209ENST00000478085 CYP3A43Q9HB55 503 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 BARX2Q9UMQ3 279 aaPredicted RBP12.45□□□□□ -0.42
SGSM3-209ENST00000478085 RCCD1A6NED2 376 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 PHF2O75151 1096 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 ATICP31939 592 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 MAP3K7CLP57077 242 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 P3H1Q32P28 736 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 NBPF20Q3BBV1 942 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 ZACNQ401N2 412 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 C6orf118Q5T5N4 469 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 ANKMY2Q8IV38 441 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 MCOLN2Q8IZK6 566 aa12.45□□□□□ -0.42
SGSM3-209ENST00000478085 LRRC8CQ8TDW0 803 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms