RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 GOLGA5Q8TBA6 731 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 FAM200AQ8TCP9 573 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 PLEKHO2Q8TD55 490 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 GPR152Q8TDT2 470 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 GIPC2Q8TF65 315 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 ERCC4Q92889 916 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-221ENST00000477561 ELMO3Q96BJ8 720 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 CGRRF1Q99675 332 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 SEPT5Q99719 369 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-221ENST00000477561 KXD1Q9BQD3 176 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 LPIN3Q9BQK8 851 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 DNAJC25Q9H1X3 360 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 KCTD10Q9H3F6 313 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 ASAH2Q9NR71 780 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 TMLHEQ9NVH6 421 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 DDX43Q9NXZ2 648 aaKnown RBP8.89□□□□□ -0.99
HDAC6-221ENST00000477561 ABI2Q9NYB9 513 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-221ENST00000477561 CGNQ9P2M7 1197 aaKnown RBP8.89□□□□□ -0.99
HDAC6-221ENST00000477561 FBXL21Q9UKT6 434 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 CA14Q9ULX7 337 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 MAFFQ9ULX9 164 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 DUSP12Q9UNI6 340 aa8.89□□□□□ -0.99
HDAC6-221ENST00000477561 GOLGA6L3A6NEY3 463 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 LRRIQ3A6PVS8 624 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-221ENST00000477561 PDXKO00764 312 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 ZNF197O14709 1029 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 PHACTR2O75167 634 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 ATP2C2O75185 946 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 MOSPD3O75425 235 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 CLSTN1O94985 981 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 NR3C1P04150 777 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 PDGFRBP09619 1106 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 LMO2P25791 158 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 DLG4P78352 724 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 MYL7Q01449 175 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 TSPY1Q01534 308 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 PLD1Q13393 1074 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 BIRC3Q13489 604 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 TEAD2Q15562 447 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 SOWAHAQ2M3V2 549 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 SDHAF4Q5VUM1 108 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 CEP135Q66GS9 1140 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 TANGO2Q6ICL3 276 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 DNAJB7Q7Z6W7 309 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-221ENST00000477561 GPIHBP1Q8IV16 184 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 ELOA2Q8IYF1 753 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-221ENST00000477561 DCP1BQ8IZD4 617 aaKnown RBP8.88□□□□□ -0.99
HDAC6-221ENST00000477561 ADGRF2Q8IZF7 708 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 SIX5Q8N196 739 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 STKLD1Q8NE28 680 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 FLCNQ8NFG4 579 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 NXPE3Q969Y0 559 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 ZSWIM3Q96MP5 696 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 MMS19Q96T76 1030 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 PI4K2AQ9BTU6 479 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 PLA2G2FQ9BZM2 168 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 MFSD1Q9H3U5 465 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 ZNF334Q9HCZ1 680 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-221ENST00000477561 AVENQ9NQS1 362 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-221ENST00000477561 DMAC2Q9NW81 257 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 GDAP2Q9NXN4 497 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 GTF3C4Q9UKN8 822 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 ZFP37Q9Y6Q3 630 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-221ENST00000477561 TSC2P49815 1807 aa8.88□□□□□ -0.99
HDAC6-221ENST00000477561 NOTCH4Q99466 2003 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 A0A1W2PRU2 124 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 MYBPHLA2RUH7 354 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 KRBA1A5PL33 1030 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 STK25O00506 426 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 CALUO43852 315 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-221ENST00000477561 CCDC192P0DO97 292 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 SRFP11831 508 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 ATF6P18850 670 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 AVPR2P30518 371 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 TUFMP49411 452 aaKnown RBP8.87□□□□□ -0.99
HDAC6-221ENST00000477561 GPR15P49685 360 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 MYL6P60660 151 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 PSMC1P62191 440 aaKnown RBP8.87□□□□□ -0.99
HDAC6-221ENST00000477561 GPC5P78333 572 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 TRPC3Q13507 836 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 KCNB1Q14721 858 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 CAMK4Q16566 473 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 INTS6LQ5JSJ4 861 aaKnown RBP8.87□□□□□ -0.99
HDAC6-221ENST00000477561 FAM78AQ5JUQ0 283 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 STXBP5Q5T5C0 1151 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 TDRD10Q5VZ19 366 aaKnown RBP8.87□□□□□ -0.99
HDAC6-221ENST00000477561 ISM2Q6H9L7 571 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 SASS6Q6UVJ0 657 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 RBM43Q6ZSC3 357 aaKnown RBP8.87□□□□□ -0.99
HDAC6-221ENST00000477561 MTSS1LQ765P7 747 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 TMC8Q8IU68 726 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 TMEM86AQ8N2M4 240 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 TOP6BLQ8N6T0 577 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 SHKBP1Q8TBC3 707 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 SPPL2BQ8TCT7 592 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 PARD3BQ8TEW8 1205 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 KBTBD7Q8WVZ9 684 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 EEF2KMTQ96G04 330 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 ACBD6Q9BR61 282 aa8.87□□□□□ -0.99
HDAC6-221ENST00000477561 MRPL45Q9BRJ2 306 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms