RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 MKNK1Q9BUB5 465 aa22.66■■□□□ 1.22
VSX1-206ENST00000444511 TNMDQ9H2S6 317 aa22.66■■□□□ 1.22
VSX1-206ENST00000444511 ITGA11Q9UKX5 1188 aa22.66■■□□□ 1.22
VSX1-206ENST00000444511 PCDHB5Q9Y5E4 795 aa22.66■■□□□ 1.22
VSX1-206ENST00000444511 PCDHGA2Q9Y5H1 932 aa22.66■■□□□ 1.22
VSX1-206ENST00000444511 ARNTLO00327 626 aa22.65■■□□□ 1.22
VSX1-206ENST00000444511 HUS1O60921 280 aa22.65■■□□□ 1.22
VSX1-206ENST00000444511 HAPLN1P10915 354 aaPredicted RBP22.65■■□□□ 1.22
VSX1-206ENST00000444511 CCNE1P24864 410 aa22.65■■□□□ 1.22
VSX1-206ENST00000444511 KPNA1P52294 538 aaPredicted RBP22.65■■□□□ 1.22
VSX1-206ENST00000444511 CYP4F8P98187 520 aa22.65■■□□□ 1.22
VSX1-206ENST00000444511 BFSP1Q12934 665 aa22.65■■□□□ 1.22
VSX1-206ENST00000444511 ZNF687Q8N1G0 1237 aa22.65■■□□□ 1.22
VSX1-206ENST00000444511 PDCL2Q8N4E4 241 aa22.65■■□□□ 1.22
VSX1-206ENST00000444511 CSGALNACT2Q8N6G5 542 aa22.65■■□□□ 1.22
VSX1-206ENST00000444511 LRRC52Q8N7C0 313 aa22.65■■□□□ 1.22
VSX1-206ENST00000444511 RUBCNQ92622 972 aa22.65■■□□□ 1.22
VSX1-206ENST00000444511 CHRDQ9H2X0 955 aa22.65■■□□□ 1.22
VSX1-206ENST00000444511 TASP1Q9H6P5 420 aa22.65■■□□□ 1.22
VSX1-206ENST00000444511 LMAN1LQ9HAT1 526 aa22.65■■□□□ 1.22
VSX1-206ENST00000444511 PDE11AQ9HCR9 933 aa22.65■■□□□ 1.22
VSX1-206ENST00000444511 ZSCAN32Q9NX65 697 aa22.65■■□□□ 1.22
VSX1-206ENST00000444511 TFIP11Q9UBB9 837 aaKnown RBP22.65■■□□□ 1.22
VSX1-206ENST00000444511 SCN1AP35498 2009 aa22.65■■□□□ 1.22
VSX1-206ENST00000444511 CACNA1IQ9P0X4 2223 aa22.64■■□□□ 1.21
VSX1-206ENST00000444511 PPP6R2O75170 966 aa22.64■■□□□ 1.21
VSX1-206ENST00000444511 KRT19P08727 400 aa22.64■■□□□ 1.21
VSX1-206ENST00000444511 TMEM191BP0C7N4 346 aa22.64■■□□□ 1.21
VSX1-206ENST00000444511 MLLT6P55198 1093 aaPredicted RBP22.64■■□□□ 1.21
VSX1-206ENST00000444511 ARHGAP29Q52LW3 1261 aa22.64■■□□□ 1.21
VSX1-206ENST00000444511 TSSK4Q6SA08 328 aa22.64■■□□□ 1.21
VSX1-206ENST00000444511 GPD1LQ8N335 351 aa22.64■■□□□ 1.21
VSX1-206ENST00000444511 MSANTD3Q96H12 275 aa22.64■■□□□ 1.21
VSX1-206ENST00000444511 IER2Q9BTL4 223 aa22.64■■□□□ 1.21
VSX1-206ENST00000444511 CUEDC2Q9H467 287 aa22.64■■□□□ 1.21
VSX1-206ENST00000444511 C8orf33Q9H7E9 229 aaPredicted RBP22.64■■□□□ 1.21
VSX1-206ENST00000444511 IL21Q9HBE4 155 aa22.64■■□□□ 1.21
VSX1-206ENST00000444511 PRMT8Q9NR22 394 aaPredicted RBP22.64■■□□□ 1.21
VSX1-206ENST00000444511 OBP2AQ9NY56 170 aa22.64■■□□□ 1.21
VSX1-206ENST00000444511 L1RE1Q9UN81 338 aa22.64■■□□□ 1.21
VSX1-206ENST00000444511 R3HCC1Q9Y3T6 440 aaKnown RBP22.64■■□□□ 1.21
VSX1-206ENST00000444511 PATJQ8NI35 1801 aa22.64■■□□□ 1.21
VSX1-206ENST00000444511 COL4A2P08572 1712 aa22.63■■□□□ 1.21
VSX1-206ENST00000444511 SLC38A8A6NNN8 435 aa22.63■■□□□ 1.21
VSX1-206ENST00000444511 KIAA0391O15091 583 aaKnown RBP22.63■■□□□ 1.21
VSX1-206ENST00000444511 ID4P47928 161 aa22.63■■□□□ 1.21
VSX1-206ENST00000444511 RBP5P82980 135 aa22.63■■□□□ 1.21
VSX1-206ENST00000444511 AMPD3Q01432 767 aa22.63■■□□□ 1.21
VSX1-206ENST00000444511 NFE2Q16621 373 aaPredicted RBP22.63■■□□□ 1.21
VSX1-206ENST00000444511 C1orf228Q6PIY5 440 aa22.63■■□□□ 1.21
VSX1-206ENST00000444511 TMEM86AQ8N2M4 240 aa22.63■■□□□ 1.21
VSX1-206ENST00000444511 SUMF1Q8NBK3 374 aa22.63■■□□□ 1.21
VSX1-206ENST00000444511 ZBTB44Q8NCP5 570 aa22.63■■□□□ 1.21
VSX1-206ENST00000444511 DHX58Q96C10 678 aa22.63■■□□□ 1.21
VSX1-206ENST00000444511 FAM84AQ96KN4 292 aa22.63■■□□□ 1.21
VSX1-206ENST00000444511 MTMR12Q9C0I1 747 aa22.63■■□□□ 1.21
VSX1-206ENST00000444511 KBTBD4Q9NVX7 518 aa22.63■■□□□ 1.21
VSX1-206ENST00000444511 DDX43Q9NXZ2 648 aaKnown RBP22.63■■□□□ 1.21
VSX1-206ENST00000444511 GVINP1Q7Z2Y8 2422 aa22.62■■□□□ 1.21
VSX1-206ENST00000444511 PRPF40AO75400 957 aaKnown RBP22.62■■□□□ 1.21
VSX1-206ENST00000444511 PRAMEF12O95522 483 aa22.62■■□□□ 1.21
VSX1-206ENST00000444511 YEATS4O95619 227 aa22.62■■□□□ 1.21
VSX1-206ENST00000444511 WEE1P30291 646 aa22.62■■□□□ 1.21
VSX1-206ENST00000444511 SOX9P48436 509 aa22.62■■□□□ 1.21
VSX1-206ENST00000444511 MYL7Q01449 175 aa22.62■■□□□ 1.21
VSX1-206ENST00000444511 PPP2R5DQ14738 602 aa22.62■■□□□ 1.21
VSX1-206ENST00000444511 E2F4Q16254 413 aa22.62■■□□□ 1.21
VSX1-206ENST00000444511 KIAA2013Q8IYS2 634 aa22.62■■□□□ 1.21
VSX1-206ENST00000444511 GLIS3Q8NEA6 775 aa22.62■■□□□ 1.21
VSX1-206ENST00000444511 BPIFB1Q8TDL5 484 aa22.62■■□□□ 1.21
VSX1-206ENST00000444511 HPS3Q969F9 1004 aa22.62■■□□□ 1.21
VSX1-206ENST00000444511 ANKRD36BP1Q96IX9 119 aa22.62■■□□□ 1.21
VSX1-206ENST00000444511 ZFYVE19Q96K21 471 aa22.62■■□□□ 1.21
VSX1-206ENST00000444511 LRRC3BQ96PB8 259 aa22.62■■□□□ 1.21
VSX1-206ENST00000444511 ACBD6Q9BR61 282 aa22.62■■□□□ 1.21
VSX1-206ENST00000444511 PI4K2AQ9BTU6 479 aa22.62■■□□□ 1.21
VSX1-206ENST00000444511 TRIM9Q9C026 710 aa22.62■■□□□ 1.21
VSX1-206ENST00000444511 TMLHEQ9NVH6 421 aa22.62■■□□□ 1.21
VSX1-206ENST00000444511 SNX9Q9Y5X1 595 aa22.62■■□□□ 1.21
VSX1-206ENST00000444511 TICRRQ7Z2Z1 1910 aa22.62■■□□□ 1.21
VSX1-206ENST00000444511 ZNF233A6NK53 670 aa22.61■■□□□ 1.21
VSX1-206ENST00000444511 CUTAO60888 179 aa22.61■■□□□ 1.21
VSX1-206ENST00000444511 ASIC1P78348 528 aa22.61■■□□□ 1.21
VSX1-206ENST00000444511 FOXD4L5Q5VV16 416 aaPredicted RBP22.61■■□□□ 1.21
VSX1-206ENST00000444511 IQUBQ8NA54 791 aa22.61■■□□□ 1.21
VSX1-206ENST00000444511 TTC8Q8TAM2 541 aa22.61■■□□□ 1.21
VSX1-206ENST00000444511 CXorf38Q8TB03 319 aa22.61■■□□□ 1.21
VSX1-206ENST00000444511 FOXD4L4Q8WXT5 416 aaPredicted RBP22.61■■□□□ 1.21
VSX1-206ENST00000444511 NELL1Q92832 810 aa22.61■■□□□ 1.21
VSX1-206ENST00000444511 FAM126AQ9BYI3 521 aaPredicted RBP22.61■■□□□ 1.21
VSX1-206ENST00000444511 THG1LQ9NWX6 298 aaKnown RBP22.61■■□□□ 1.21
VSX1-206ENST00000444511 GDAP2Q9NXN4 497 aa22.61■■□□□ 1.21
VSX1-206ENST00000444511 ZMYM5Q9UJ78 669 aa22.61■■□□□ 1.21
VSX1-206ENST00000444511 TNNC2P02585 160 aa22.6■■□□□ 1.21
VSX1-206ENST00000444511 CHRNB1P11230 501 aa22.6■■□□□ 1.21
VSX1-206ENST00000444511 ACAT1P24752 427 aaKnown RBP22.6■■□□□ 1.21
VSX1-206ENST00000444511 CCR3P51677 355 aa22.6■■□□□ 1.21
VSX1-206ENST00000444511 PLCB2Q00722 1185 aa22.6■■□□□ 1.21
VSX1-206ENST00000444511 MYO1EQ12965 1108 aa22.6■■□□□ 1.21
VSX1-206ENST00000444511 LRRC32Q14392 662 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms