RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 FGFR3P22607 806 aa22.45■■□□□ 1.18
VPS13B-204ENST00000441350 TKTP29401 623 aaKnown RBP22.45■■□□□ 1.18
VPS13B-204ENST00000441350 BMS1Q14692 1282 aaKnown RBP22.45■■□□□ 1.18
VPS13B-204ENST00000441350 FAM171A1Q5VUB5 890 aa22.45■■□□□ 1.18
VPS13B-204ENST00000441350 ACOT1Q86TX2 421 aa22.45■■□□□ 1.18
VPS13B-204ENST00000441350 RNF168Q8IYW5 571 aaPredicted RBP22.45■■□□□ 1.18
VPS13B-204ENST00000441350 HEXIM2Q96MH2 286 aaKnown RBP22.45■■□□□ 1.18
VPS13B-204ENST00000441350 RTP3Q9BQQ7 232 aa22.45■■□□□ 1.18
VPS13B-204ENST00000441350 DPEP3Q9H4B8 488 aa22.45■■□□□ 1.18
VPS13B-204ENST00000441350 DEF6Q9H4E7 631 aa22.45■■□□□ 1.18
VPS13B-204ENST00000441350 DDX43Q9NXZ2 648 aaKnown RBP22.45■■□□□ 1.18
VPS13B-204ENST00000441350 ADAMTS1Q9UHI8 967 aa22.45■■□□□ 1.18
VPS13B-204ENST00000441350 PYCARDQ9ULZ3 195 aa22.45■■□□□ 1.18
VPS13B-204ENST00000441350 A0A087X0T9 212 aa22.44■■□□□ 1.18
VPS13B-204ENST00000441350 LCHNA4D1U4 455 aa22.44■■□□□ 1.18
VPS13B-204ENST00000441350 DDX3XO00571 662 aaKnown RBP eCLIP22.44■■□□□ 1.18
VPS13B-204ENST00000441350 AKR1B10O60218 316 aa22.44■■□□□ 1.18
VPS13B-204ENST00000441350 LCA5LO95447 670 aa22.44■■□□□ 1.18
VPS13B-204ENST00000441350 MMEP08473 750 aa22.44■■□□□ 1.18
VPS13B-204ENST00000441350 FAM228BP0C875 321 aa22.44■■□□□ 1.18
VPS13B-204ENST00000441350 VDRP11473 427 aa22.44■■□□□ 1.18
VPS13B-204ENST00000441350 BRD2P25440 801 aaKnown RBP22.44■■□□□ 1.18
VPS13B-204ENST00000441350 CYLC1P35663 651 aaPredicted RBP22.44■■□□□ 1.18
VPS13B-204ENST00000441350 RGS19P49795 217 aa22.44■■□□□ 1.18
VPS13B-204ENST00000441350 FMO1Q01740 532 aa22.44■■□□□ 1.18
VPS13B-204ENST00000441350 TAF3Q5VWG9 929 aa22.44■■□□□ 1.18
VPS13B-204ENST00000441350 OVOS1Q6IE37 1185 aa22.44■■□□□ 1.18
VPS13B-204ENST00000441350 VPS36Q86VN1 386 aa22.44■■□□□ 1.18
VPS13B-204ENST00000441350 LNX1Q8TBB1 728 aaPredicted RBP22.44■■□□□ 1.18
VPS13B-204ENST00000441350 UBE2OQ9C0C9 1292 aaKnown RBP22.44■■□□□ 1.18
VPS13B-204ENST00000441350 AAASQ9NRG9 546 aa22.44■■□□□ 1.18
VPS13B-204ENST00000441350 EIF3CLB5ME19 914 aaKnown RBP22.43■■□□□ 1.18
VPS13B-204ENST00000441350 THAP12O43422 761 aa22.43■■□□□ 1.18
VPS13B-204ENST00000441350 OAZ2O95190 189 aa22.43■■□□□ 1.18
VPS13B-204ENST00000441350 CD19P15391 556 aa22.43■■□□□ 1.18
VPS13B-204ENST00000441350 TNFAIP3P21580 790 aa22.43■■□□□ 1.18
VPS13B-204ENST00000441350 SLC18A3Q16572 532 aa22.43■■□□□ 1.18
VPS13B-204ENST00000441350 TOGARAM2Q6ZUX3 1019 aa22.43■■□□□ 1.18
VPS13B-204ENST00000441350 GLYCTKQ8IVS8 523 aa22.43■■□□□ 1.18
VPS13B-204ENST00000441350 TNIP3Q96KP6 325 aa22.43■■□□□ 1.18
VPS13B-204ENST00000441350 EIF3CQ99613 913 aaKnown RBP22.43■■□□□ 1.18
VPS13B-204ENST00000441350 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.43■■□□□ 1.18
VPS13B-204ENST00000441350 VN1R3Q9BXE9 311 aa22.43■■□□□ 1.18
VPS13B-204ENST00000441350 DNAI2Q9GZS0 605 aa22.43■■□□□ 1.18
VPS13B-204ENST00000441350 SPTLC3Q9NUV7 552 aa22.43■■□□□ 1.18
VPS13B-204ENST00000441350 SPG21Q9NZD8 308 aa22.43■■□□□ 1.18
VPS13B-204ENST00000441350 PUF60Q9UHX1 559 aaKnown RBP22.43■■□□□ 1.18
VPS13B-204ENST00000441350 NENFQ9UMX5 172 aa22.43■■□□□ 1.18
VPS13B-204ENST00000441350 ZNF263O14978 683 aa22.42■■□□□ 1.18
VPS13B-204ENST00000441350 YWHAHQ04917 246 aaPredicted RBP22.42■■□□□ 1.18
VPS13B-204ENST00000441350 GFPT1Q06210 699 aaPredicted RBP22.42■■□□□ 1.18
VPS13B-204ENST00000441350 MRPL58Q14197 206 aaKnown RBP22.42■■□□□ 1.18
VPS13B-204ENST00000441350 KIAA0319Q5VV43 1072 aa22.42■■□□□ 1.18
VPS13B-204ENST00000441350 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.42■■□□□ 1.18
VPS13B-204ENST00000441350 C12orf29Q8N999 325 aa22.42■■□□□ 1.18
VPS13B-204ENST00000441350 PCDHB18PQ96TA0 734 aa22.42■■□□□ 1.18
VPS13B-204ENST00000441350 ACBD6Q9BR61 282 aa22.42■■□□□ 1.18
VPS13B-204ENST00000441350 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.42■■□□□ 1.18
VPS13B-204ENST00000441350 CFHP08603 1231 aa22.42■■□□□ 1.18
VPS13B-204ENST00000441350 ACAT1P24752 427 aaKnown RBP22.42■■□□□ 1.18
VPS13B-204ENST00000441350 PCSK1P29120 753 aa22.42■■□□□ 1.18
VPS13B-204ENST00000441350 PPM1AP35813 382 aa22.42■■□□□ 1.18
VPS13B-204ENST00000441350 RABGGTBP53611 331 aa22.42■■□□□ 1.18
VPS13B-204ENST00000441350 SGO2Q562F6 1265 aa22.42■■□□□ 1.18
VPS13B-204ENST00000441350 FAM109BQ6ICB4 259 aaPredicted RBP22.42■■□□□ 1.18
VPS13B-204ENST00000441350 TAS1R1Q7RTX1 841 aa22.42■■□□□ 1.18
VPS13B-204ENST00000441350 PALB2Q86YC2 1186 aa22.42■■□□□ 1.18
VPS13B-204ENST00000441350 B3GALNT2Q8NCR0 500 aa22.42■■□□□ 1.18
VPS13B-204ENST00000441350 CDH9Q9ULB4 789 aa22.42■■□□□ 1.18
VPS13B-204ENST00000441350 PCDHGC3Q9UN70 934 aa22.42■■□□□ 1.18
VPS13B-204ENST00000441350 ZKSCAN5Q9Y2L8 839 aa22.42■■□□□ 1.18
VPS13B-204ENST00000441350 PCDHB12Q9Y5F1 795 aa22.42■■□□□ 1.18
VPS13B-204ENST00000441350 LAMA2P24043 3122 aaKnown RBP22.41■■□□□ 1.18
VPS13B-204ENST00000441350 GRXCR1A8MXD5 290 aa22.41■■□□□ 1.18
VPS13B-204ENST00000441350 O00370 1275 aa22.41■■□□□ 1.18
VPS13B-204ENST00000441350 TNRC18O15417 2968 aaPredicted RBP22.41■■□□□ 1.18
VPS13B-204ENST00000441350 MED7O43513 233 aa22.41■■□□□ 1.18
VPS13B-204ENST00000441350 ATP2C2O75185 946 aa22.41■■□□□ 1.18
VPS13B-204ENST00000441350 PTPN1P18031 435 aaKnown RBP22.41■■□□□ 1.18
VPS13B-204ENST00000441350 CNGA2Q16280 664 aa22.41■■□□□ 1.18
VPS13B-204ENST00000441350 VARS2Q5ST30 1063 aaKnown RBP22.41■■□□□ 1.18
VPS13B-204ENST00000441350 THEM5Q8N1Q8 247 aa22.41■■□□□ 1.18
VPS13B-204ENST00000441350 TMEM169Q96HH4 297 aa22.41■■□□□ 1.18
VPS13B-204ENST00000441350 LPIN3Q9BQK8 851 aa22.41■■□□□ 1.18
VPS13B-204ENST00000441350 SYT15Q9BQS2 421 aa22.41■■□□□ 1.18
VPS13B-204ENST00000441350 CRTAC1Q9NQ79 661 aa22.41■■□□□ 1.18
VPS13B-204ENST00000441350 NAGPAQ9UK23 515 aa22.41■■□□□ 1.18
VPS13B-204ENST00000441350 REXO2Q9Y3B8 237 aaKnown RBP22.41■■□□□ 1.18
VPS13B-204ENST00000441350 ADGRG1Q9Y653 693 aa22.41■■□□□ 1.18
VPS13B-204ENST00000441350 PSMC1P62191 440 aaKnown RBP22.4■■□□□ 1.18
VPS13B-204ENST00000441350 RTP2Q5QGT7 225 aa22.4■■□□□ 1.18
VPS13B-204ENST00000441350 ARHGAP17Q68EM7 881 aa22.4■■□□□ 1.18
VPS13B-204ENST00000441350 OR10T2Q8NGX3 314 aa22.4■■□□□ 1.18
VPS13B-204ENST00000441350 B3GALT6Q96L58 329 aa22.4■■□□□ 1.18
VPS13B-204ENST00000441350 DESI2Q9BSY9 194 aa22.4■■□□□ 1.18
VPS13B-204ENST00000441350 TTPALQ9BTX7 342 aa22.4■■□□□ 1.18
VPS13B-204ENST00000441350 CHST7Q9NS84 486 aa22.4■■□□□ 1.18
VPS13B-204ENST00000441350 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.4■■□□□ 1.18
VPS13B-204ENST00000441350 GZMAP12544 262 aa22.39■■□□□ 1.18
VPS13B-204ENST00000441350 CYP27A1Q02318 531 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms