RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 PEX1O43933 1283 aa6.35□□□□□ -1.39
HMGB3P5-201ENST00000428894 PRAMEF10O60809 474 aa6.35□□□□□ -1.39
HMGB3P5-201ENST00000428894 CCND1P24385 295 aa6.35□□□□□ -1.39
HMGB3P5-201ENST00000428894 ELLP55199 621 aaPredicted RBP6.35□□□□□ -1.39
HMGB3P5-201ENST00000428894 SYCE2Q6PIF2 218 aa6.35□□□□□ -1.39
HMGB3P5-201ENST00000428894 ZNF365Q70YC5 407 aa6.35□□□□□ -1.39
HMGB3P5-201ENST00000428894 AOPEPQ8N6M6 819 aa6.35□□□□□ -1.39
HMGB3P5-201ENST00000428894 BOLLQ8N9W6 283 aaKnown RBP6.35□□□□□ -1.39
HMGB3P5-201ENST00000428894 SLC17A8Q8NDX2 589 aa6.35□□□□□ -1.39
HMGB3P5-201ENST00000428894 IMPG2Q9BZV3 1241 aa6.35□□□□□ -1.39
HMGB3P5-201ENST00000428894 CFAP20Q9Y6A4 193 aaKnown RBP6.35□□□□□ -1.39
HMGB3P5-201ENST00000428894 PHLPP1O60346 1717 aa6.34□□□□□ -1.39
HMGB3P5-201ENST00000428894 UBR1Q8IWV7 1749 aa6.34□□□□□ -1.39
HMGB3P5-201ENST00000428894 CD38P28907 300 aa6.34□□□□□ -1.39
HMGB3P5-201ENST00000428894 ADKP55263 362 aaKnown RBP6.34□□□□□ -1.39
HMGB3P5-201ENST00000428894 RPS7P62081 194 aaKnown RBP6.34□□□□□ -1.39
HMGB3P5-201ENST00000428894 MRPS21P82921 87 aaKnown RBP6.34□□□□□ -1.39
HMGB3P5-201ENST00000428894 KHDC1Q4VXA5 237 aaKnown RBP6.34□□□□□ -1.39
HMGB3P5-201ENST00000428894 ZNF362Q5T0B9 420 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P5-201ENST00000428894 TTC7BQ86TV6 843 aa6.34□□□□□ -1.39
HMGB3P5-201ENST00000428894 FAM98AQ8NCA5 519 aaKnown RBP6.34□□□□□ -1.39
HMGB3P5-201ENST00000428894 NSUN7Q8NE18 718 aaKnown RBP6.34□□□□□ -1.39
HMGB3P5-201ENST00000428894 TMIEQ8NEW7 156 aa6.34□□□□□ -1.39
HMGB3P5-201ENST00000428894 VOPP1Q96AW1 172 aa6.34□□□□□ -1.39
HMGB3P5-201ENST00000428894 PDLIM2Q96JY6 352 aa6.34□□□□□ -1.39
HMGB3P5-201ENST00000428894 VRK1Q99986 396 aaPredicted RBP6.34□□□□□ -1.39
HMGB3P5-201ENST00000428894 LRFN3Q9BTN0 628 aa6.34□□□□□ -1.39
HMGB3P5-201ENST00000428894 SLC13A1Q9BZW2 595 aa6.34□□□□□ -1.39
HMGB3P5-201ENST00000428894 MAN1C1Q9NR34 630 aa6.34□□□□□ -1.39
HMGB3P5-201ENST00000428894 INTS13Q9NVM9 706 aa6.34□□□□□ -1.39
HMGB3P5-201ENST00000428894 CTTNBP2NLQ9P2B4 639 aa6.34□□□□□ -1.39
HMGB3P5-201ENST00000428894 NEU2Q9Y3R4 380 aa6.34□□□□□ -1.39
HMGB3P5-201ENST00000428894 SLIT1O75093 1534 aa6.34□□□□□ -1.39
HMGB3P5-201ENST00000428894 CCDC141Q6ZP82 1450 aa6.34□□□□□ -1.4
HMGB3P5-201ENST00000428894 MGST3O14880 152 aa6.33□□□□□ -1.4
HMGB3P5-201ENST00000428894 YY2O15391 372 aa6.33□□□□□ -1.4
HMGB3P5-201ENST00000428894 GATA3P23771 443 aa6.33□□□□□ -1.4
HMGB3P5-201ENST00000428894 FOLR3P41439 243 aa6.33□□□□□ -1.4
HMGB3P5-201ENST00000428894 C21orf58P58505 322 aa6.33□□□□□ -1.4
HMGB3P5-201ENST00000428894 DSC2Q02487 901 aa6.33□□□□□ -1.4
HMGB3P5-201ENST00000428894 SNAPC2Q13487 334 aa6.33□□□□□ -1.4
HMGB3P5-201ENST00000428894 CD300EQ496F6 205 aaPredicted RBP6.33□□□□□ -1.4
HMGB3P5-201ENST00000428894 CFAP52Q8N1V2 620 aa6.33□□□□□ -1.4
HMGB3P5-201ENST00000428894 NSUN6Q8TEA1 469 aaKnown RBP6.33□□□□□ -1.4
HMGB3P5-201ENST00000428894 NELL1Q92832 810 aa6.33□□□□□ -1.4
HMGB3P5-201ENST00000428894 SMAD5Q99717 465 aaKnown RBP6.33□□□□□ -1.4
HMGB3P5-201ENST00000428894 ERVK-7P63135 1459 aa6.33□□□□□ -1.4
HMGB3P5-201ENST00000428894 ARHGAP23Q9P227 1491 aa6.33□□□□□ -1.4
HMGB3P5-201ENST00000428894 FGD6Q6ZV73 1430 aa6.33□□□□□ -1.4
HMGB3P5-201ENST00000428894 SUN1O94901 812 aa6.32□□□□□ -1.4
HMGB3P5-201ENST00000428894 IGLV2-14P01704 120 aa6.32□□□□□ -1.4
HMGB3P5-201ENST00000428894 SRGNP10124 158 aa6.32□□□□□ -1.4
HMGB3P5-201ENST00000428894 MALP21145 153 aa6.32□□□□□ -1.4
HMGB3P5-201ENST00000428894 CACNA2D1P54289 1103 aa6.32□□□□□ -1.4
HMGB3P5-201ENST00000428894 PIGFQ07326 219 aa6.32□□□□□ -1.4
HMGB3P5-201ENST00000428894 DYRK1AQ13627 763 aa6.32□□□□□ -1.4
HMGB3P5-201ENST00000428894 VWA1Q6PCB0 445 aa6.32□□□□□ -1.4
HMGB3P5-201ENST00000428894 ARHGEF25Q86VW2 580 aa6.32□□□□□ -1.4
HMGB3P5-201ENST00000428894 PDPRQ8NCN5 879 aa6.32□□□□□ -1.4
HMGB3P5-201ENST00000428894 SLC30A5Q8TAD4 765 aa6.32□□□□□ -1.4
HMGB3P5-201ENST00000428894 CDK12Q9NYV4 1490 aaPredicted RBP6.32□□□□□ -1.4
HMGB3P5-201ENST00000428894 TMEM2Q9UHN6 1383 aa6.31□□□□□ -1.4
HMGB3P5-201ENST00000428894 ABCC3O15438 1527 aa6.31□□□□□ -1.4
HMGB3P5-201ENST00000428894 CCDC195A0A1B0GUA6 201 aa6.31□□□□□ -1.4
HMGB3P5-201ENST00000428894 F2RL2O00254 374 aa6.31□□□□□ -1.4
HMGB3P5-201ENST00000428894 TOR1BO14657 336 aa6.31□□□□□ -1.4
HMGB3P5-201ENST00000428894 ANXA1P04083 346 aa6.31□□□□□ -1.4
HMGB3P5-201ENST00000428894 SMARCA1P28370 1054 aa6.31□□□□□ -1.4
HMGB3P5-201ENST00000428894 ANXA11P50995 505 aaKnown RBP6.31□□□□□ -1.4
HMGB3P5-201ENST00000428894 PREPLQ4J6C6 727 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P5-201ENST00000428894 TSHZ1Q6ZSZ6 1077 aa6.31□□□□□ -1.4
HMGB3P5-201ENST00000428894 MIER2Q8N344 545 aa6.31□□□□□ -1.4
HMGB3P5-201ENST00000428894 LPIN2Q92539 896 aa6.31□□□□□ -1.4
HMGB3P5-201ENST00000428894 FBXL20Q96IG2 436 aa6.31□□□□□ -1.4
HMGB3P5-201ENST00000428894 LRIG1Q96JA1 1093 aa6.31□□□□□ -1.4
HMGB3P5-201ENST00000428894 HEPHQ9BQS7 1158 aa6.31□□□□□ -1.4
HMGB3P5-201ENST00000428894 PCDH12Q9NPG4 1184 aa6.31□□□□□ -1.4
HMGB3P5-201ENST00000428894 ADARB2Q9NS39 739 aaKnown RBP6.31□□□□□ -1.4
HMGB3P5-201ENST00000428894 SEMA4GQ9NTN9 838 aa6.31□□□□□ -1.4
HMGB3P5-201ENST00000428894 SLC17A6Q9P2U8 582 aa6.31□□□□□ -1.4
HMGB3P5-201ENST00000428894 SPEF1Q9Y4P9 236 aa6.31□□□□□ -1.4
HMGB3P5-201ENST00000428894 COL4A3BPQ9Y5P4 624 aa6.31□□□□□ -1.4
HMGB3P5-201ENST00000428894 PRDM15P57071 1507 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P5-201ENST00000428894 NKTRP30414 1462 aaKnown RBP6.3□□□□□ -1.4
HMGB3P5-201ENST00000428894 NCOA2Q15596 1464 aa6.3□□□□□ -1.4
HMGB3P5-201ENST00000428894 ZRANB2O95218 330 aaKnown RBP eCLIP6.3□□□□□ -1.4
HMGB3P5-201ENST00000428894 ZNF37AP17032 561 aaPredicted RBP6.3□□□□□ -1.4
HMGB3P5-201ENST00000428894 RBM6P78332 1123 aaKnown RBP6.3□□□□□ -1.4
HMGB3P5-201ENST00000428894 MC2RQ01718 297 aa6.3□□□□□ -1.4
HMGB3P5-201ENST00000428894 CCDC93Q567U6 631 aa6.3□□□□□ -1.4
HMGB3P5-201ENST00000428894 KAZNQ674X7 775 aa6.3□□□□□ -1.4
HMGB3P5-201ENST00000428894 KIAA0895LQ68EN5 471 aa6.3□□□□□ -1.4
HMGB3P5-201ENST00000428894 SLC4A10Q6U841 1118 aa6.3□□□□□ -1.4
HMGB3P5-201ENST00000428894 ADGRG5Q8IZF4 528 aa6.3□□□□□ -1.4
HMGB3P5-201ENST00000428894 TOR1AIP2Q8NFQ8 470 aa6.3□□□□□ -1.4
HMGB3P5-201ENST00000428894 SNX19Q92543 992 aa6.3□□□□□ -1.4
HMGB3P5-201ENST00000428894 SPATA5L1Q9BVQ7 753 aa6.3□□□□□ -1.4
HMGB3P5-201ENST00000428894 ASPSCR1Q9BZE9 553 aa6.3□□□□□ -1.4
HMGB3P5-201ENST00000428894 ARHGAP31Q2M1Z3 1444 aa6.3□□□□□ -1.4
HMGB3P5-201ENST00000428894 CEP162Q5TB80 1403 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms