RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 ACAT1P24752 427 aaKnown RBP12.95□□□□□ -0.34
TTC3-208ENST00000428693 PNPLA4P41247 253 aa12.95□□□□□ -0.34
TTC3-208ENST00000428693 MAGEA9P43362 315 aa12.95□□□□□ -0.34
TTC3-208ENST00000428693 SOX9P48436 509 aa12.95□□□□□ -0.34
TTC3-208ENST00000428693 WNT7BP56706 349 aa12.95□□□□□ -0.34
TTC3-208ENST00000428693 ASIC1P78348 528 aa12.95□□□□□ -0.34
TTC3-208ENST00000428693 MTAPQ13126 283 aa12.95□□□□□ -0.34
TTC3-208ENST00000428693 ALCAMQ13740 583 aa12.95□□□□□ -0.34
TTC3-208ENST00000428693 GAREM2Q75VX8 874 aa12.95□□□□□ -0.34
TTC3-208ENST00000428693 LRRTM3Q86VH5 581 aa12.95□□□□□ -0.34
TTC3-208ENST00000428693 NT5DC4Q86YG4 428 aa12.95□□□□□ -0.34
TTC3-208ENST00000428693 HSCBQ8IWL3 235 aa12.95□□□□□ -0.34
TTC3-208ENST00000428693 BRSK2Q8IWQ3 736 aa12.95□□□□□ -0.34
TTC3-208ENST00000428693 MAML2Q8IZL2 1156 aaPredicted RBP12.95□□□□□ -0.34
TTC3-208ENST00000428693 HPS3Q969F9 1004 aa12.95□□□□□ -0.34
TTC3-208ENST00000428693 ZFYVE19Q96K21 471 aa12.95□□□□□ -0.34
TTC3-208ENST00000428693 PI4K2AQ9BTU6 479 aa12.95□□□□□ -0.34
TTC3-208ENST00000428693 LRRC3Q9BY71 257 aa12.95□□□□□ -0.34
TTC3-208ENST00000428693 LRRC27Q9C0I9 530 aa12.95□□□□□ -0.34
TTC3-208ENST00000428693 SMG9Q9H0W8 520 aaKnown RBP12.95□□□□□ -0.34
TTC3-208ENST00000428693 TMEM206Q9H813 350 aa12.95□□□□□ -0.34
TTC3-208ENST00000428693 PDE11AQ9HCR9 933 aa12.95□□□□□ -0.34
TTC3-208ENST00000428693 OLFML3Q9NRN5 406 aa12.95□□□□□ -0.34
TTC3-208ENST00000428693 FBXO4Q9UKT5 387 aa12.95□□□□□ -0.34
TTC3-208ENST00000428693 PCDHB5Q9Y5E4 795 aa12.95□□□□□ -0.34
TTC3-208ENST00000428693 GVINP1Q7Z2Y8 2422 aa12.95□□□□□ -0.34
TTC3-208ENST00000428693 EXTL3O43909 919 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 ATF6P18850 670 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 CDC25CP30307 473 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 ID4P47928 161 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 RBP5P82980 135 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 AMPD3Q01432 767 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 MYL7Q01449 175 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 SDHAF4Q5VUM1 108 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 GPD1LQ8N335 351 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 PDCL2Q8N4E4 241 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 DCLK2Q8N568 766 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 C1orf127Q8N9H9 656 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 RDH13Q8NBN7 331 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 LINC00301Q8NCQ3 95 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 STKLD1Q8NE28 680 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 SPPL2BQ8TCT7 592 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 CLDN23Q96B33 292 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 RSPRY1Q96DX4 576 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 ANKRD36BP1Q96IX9 119 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 STRA6Q9BX79 667 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 MTMR12Q9C0I1 747 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 TRPV4Q9HBA0 871 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 DDX43Q9NXZ2 648 aaKnown RBP12.94□□□□□ -0.34
TTC3-208ENST00000428693 NCDNQ9UBB6 729 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 SNX9Q9Y5X1 595 aa12.94□□□□□ -0.34
TTC3-208ENST00000428693 NCANO14594 1321 aa12.93□□□□□ -0.34
TTC3-208ENST00000428693 CHADO15335 359 aa12.93□□□□□ -0.34
TTC3-208ENST00000428693 TNNC2P02585 160 aa12.93□□□□□ -0.34
TTC3-208ENST00000428693 HAPLN1P10915 354 aaPredicted RBP12.93□□□□□ -0.34
TTC3-208ENST00000428693 AVPR1AP37288 418 aa12.93□□□□□ -0.34
TTC3-208ENST00000428693 RPS9P46781 194 aaKnown RBP12.93□□□□□ -0.34
TTC3-208ENST00000428693 NASPP49321 788 aaPredicted RBP12.93□□□□□ -0.34
TTC3-208ENST00000428693 GPR15P49685 360 aa12.93□□□□□ -0.34
TTC3-208ENST00000428693 POU5F1Q01860 360 aaKnown RBP12.93□□□□□ -0.34
TTC3-208ENST00000428693 SMARCB1Q12824 385 aa12.93□□□□□ -0.34
TTC3-208ENST00000428693 MYO1EQ12965 1108 aa12.93□□□□□ -0.34
TTC3-208ENST00000428693 PPP2R5DQ14738 602 aa12.93□□□□□ -0.34
TTC3-208ENST00000428693 ZNF528Q3MIS6 628 aa12.93□□□□□ -0.34
TTC3-208ENST00000428693 GLIS3Q8NEA6 775 aa12.93□□□□□ -0.34
TTC3-208ENST00000428693 C2orf15Q8WU43 125 aaKnown RBP12.93□□□□□ -0.34
TTC3-208ENST00000428693 RUBCNQ92622 972 aa12.93□□□□□ -0.34
TTC3-208ENST00000428693 TNMDQ9H2S6 317 aa12.93□□□□□ -0.34
TTC3-208ENST00000428693 TASP1Q9H6P5 420 aa12.93□□□□□ -0.34
TTC3-208ENST00000428693 TMLHEQ9NVH6 421 aa12.93□□□□□ -0.34
TTC3-208ENST00000428693 THG1LQ9NWX6 298 aaKnown RBP12.93□□□□□ -0.34
TTC3-208ENST00000428693 ZSCAN32Q9NX65 697 aa12.93□□□□□ -0.34
TTC3-208ENST00000428693 ITGA11Q9UKX5 1188 aa12.93□□□□□ -0.34
TTC3-208ENST00000428693 L1RE1Q9UN81 338 aa12.93□□□□□ -0.34
TTC3-208ENST00000428693 TSC2P49815 1807 aa12.92□□□□□ -0.34
TTC3-208ENST00000428693 ZNF233A6NK53 670 aa12.92□□□□□ -0.34
TTC3-208ENST00000428693 CUTAO60888 179 aa12.92□□□□□ -0.34
TTC3-208ENST00000428693 PRAMEF12O95522 483 aa12.92□□□□□ -0.34
TTC3-208ENST00000428693 ME1P48163 572 aa12.92□□□□□ -0.34
TTC3-208ENST00000428693 CYP2J2P51589 502 aa12.92□□□□□ -0.34
TTC3-208ENST00000428693 NFE2Q16621 373 aaPredicted RBP12.92□□□□□ -0.34
TTC3-208ENST00000428693 DDR2Q16832 855 aa12.92□□□□□ -0.34
TTC3-208ENST00000428693 ARHGAP29Q52LW3 1261 aa12.92□□□□□ -0.34
TTC3-208ENST00000428693 SCARA3Q6AZY7 606 aa12.92□□□□□ -0.34
TTC3-208ENST00000428693 SPATA2LQ8IUW3 424 aaPredicted RBP12.92□□□□□ -0.34
TTC3-208ENST00000428693 SCN4BQ8IWT1 228 aa12.92□□□□□ -0.34
TTC3-208ENST00000428693 NELFCDQ8IXH7 590 aa12.92□□□□□ -0.34
TTC3-208ENST00000428693 ADGRF2Q8IZF7 708 aa12.92□□□□□ -0.34
TTC3-208ENST00000428693 MAB21L3Q8N8X9 362 aa12.92□□□□□ -0.34
TTC3-208ENST00000428693 IQUBQ8NA54 791 aa12.92□□□□□ -0.34
TTC3-208ENST00000428693 BPIFB1Q8TDL5 484 aa12.92□□□□□ -0.34
TTC3-208ENST00000428693 BORCS6Q96GS4 357 aa12.92□□□□□ -0.34
TTC3-208ENST00000428693 TRPC7Q9HCX4 862 aa12.92□□□□□ -0.34
TTC3-208ENST00000428693 RBM12Q9NTZ6 932 aaKnown RBP12.92□□□□□ -0.34
TTC3-208ENST00000428693 GTSE1Q9NYZ3 720 aa12.92□□□□□ -0.34
TTC3-208ENST00000428693 HSFX1Q9UBD0 423 aa12.92□□□□□ -0.34
TTC3-208ENST00000428693 GTF3C4Q9UKN8 822 aa12.92□□□□□ -0.34
TTC3-208ENST00000428693 PCDHGA2Q9Y5H1 932 aa12.92□□□□□ -0.34
TTC3-208ENST00000428693 FRYLO94915 3013 aa12.92□□□□□ -0.34
TTC3-208ENST00000428693 ZNF638Q14966 1978 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms