RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 SMC2O95347 1197 aa12.02□□□□□ -0.49
RFFL-204ENST00000414419 VNN2O95498 520 aa12.02□□□□□ -0.49
RFFL-204ENST00000414419 FGF19O95750 216 aa12.02□□□□□ -0.49
RFFL-204ENST00000414419 CST3P01034 146 aaPredicted RBP12.02□□□□□ -0.49
RFFL-204ENST00000414419 RPL13P26373 211 aaKnown RBP12.02□□□□□ -0.49
RFFL-204ENST00000414419 CDR1P51861 262 aa12.02□□□□□ -0.49
RFFL-204ENST00000414419 TNNC1P63316 161 aa12.02□□□□□ -0.49
RFFL-204ENST00000414419 BIRC3Q13489 604 aa12.02□□□□□ -0.49
RFFL-204ENST00000414419 PNOCQ13519 176 aa12.02□□□□□ -0.49
RFFL-204ENST00000414419 SOWAHAQ2M3V2 549 aa12.02□□□□□ -0.49
RFFL-204ENST00000414419 WDR72Q3MJ13 1102 aa12.02□□□□□ -0.49
RFFL-204ENST00000414419 PRSS36Q5K4E3 855 aa12.02□□□□□ -0.49
RFFL-204ENST00000414419 LRRTM3Q86VH5 581 aa12.02□□□□□ -0.49
RFFL-204ENST00000414419 FMR1NBQ8N0W7 255 aaPredicted RBP12.02□□□□□ -0.49
RFFL-204ENST00000414419 SIX5Q8N196 739 aa12.02□□□□□ -0.49
RFFL-204ENST00000414419 GUF1Q8N442 669 aaKnown RBP12.02□□□□□ -0.49
RFFL-204ENST00000414419 FLCNQ8NFG4 579 aa12.02□□□□□ -0.49
RFFL-204ENST00000414419 PARD3BQ8TEW8 1205 aa12.02□□□□□ -0.49
RFFL-204ENST00000414419 PSMG2Q969U7 264 aa12.02□□□□□ -0.49
RFFL-204ENST00000414419 TCEAL4Q96EI5 215 aa12.02□□□□□ -0.49
RFFL-204ENST00000414419 PRRX2Q99811 253 aa12.02□□□□□ -0.49
RFFL-204ENST00000414419 GPR88Q9GZN0 384 aa12.02□□□□□ -0.49
RFFL-204ENST00000414419 KCNH6Q9H252 994 aa12.02□□□□□ -0.49
RFFL-204ENST00000414419 DMAC2Q9NW81 257 aa12.02□□□□□ -0.49
RFFL-204ENST00000414419 WNT16Q9UBV4 365 aa12.02□□□□□ -0.49
RFFL-204ENST00000414419 TRAF3IP3Q9Y228 551 aa12.02□□□□□ -0.49
RFFL-204ENST00000414419 ARIH1Q9Y4X5 557 aaPredicted RBP12.02□□□□□ -0.49
RFFL-204ENST00000414419 MYH10P35580 1976 aa12.01□□□□□ -0.49
RFFL-204ENST00000414419 SOAT2O75908 522 aa12.01□□□□□ -0.49
RFFL-204ENST00000414419 PDGFBP01127 241 aaPredicted RBP12.01□□□□□ -0.49
RFFL-204ENST00000414419 HAPLN1P10915 354 aaPredicted RBP12.01□□□□□ -0.49
RFFL-204ENST00000414419 NR2F2P24468 414 aa12.01□□□□□ -0.49
RFFL-204ENST00000414419 ACAT1P24752 427 aaKnown RBP12.01□□□□□ -0.49
RFFL-204ENST00000414419 AVPR2P30518 371 aa12.01□□□□□ -0.49
RFFL-204ENST00000414419 ATICP31939 592 aa12.01□□□□□ -0.49
RFFL-204ENST00000414419 ANP32AP39687 249 aaKnown RBP12.01□□□□□ -0.49
RFFL-204ENST00000414419 CASP4P49662 377 aa12.01□□□□□ -0.49
RFFL-204ENST00000414419 EPHA5P54756 1037 aa12.01□□□□□ -0.49
RFFL-204ENST00000414419 INTS6LQ5JSJ4 861 aaKnown RBP12.01□□□□□ -0.49
RFFL-204ENST00000414419 SCARA3Q6AZY7 606 aa12.01□□□□□ -0.49
RFFL-204ENST00000414419 DNAJB7Q7Z6W7 309 aaPredicted RBP12.01□□□□□ -0.49
RFFL-204ENST00000414419 SPATA2LQ8IUW3 424 aaPredicted RBP12.01□□□□□ -0.49
RFFL-204ENST00000414419 TTC9BQ8N6N2 239 aa12.01□□□□□ -0.49
RFFL-204ENST00000414419 TMEM174Q8WUU8 243 aa12.01□□□□□ -0.49
RFFL-204ENST00000414419 SMARCE1Q969G3 411 aa12.01□□□□□ -0.49
RFFL-204ENST00000414419 SYAP1Q96A49 352 aaPredicted RBP12.01□□□□□ -0.49
RFFL-204ENST00000414419 TIGD1Q96MW7 591 aa12.01□□□□□ -0.49
RFFL-204ENST00000414419 GSDMAQ96QA5 445 aa12.01□□□□□ -0.49
RFFL-204ENST00000414419 GCNAQ96QF7 691 aa12.01□□□□□ -0.49
RFFL-204ENST00000414419 KXD1Q9BQD3 176 aa12.01□□□□□ -0.49
RFFL-204ENST00000414419 PI4K2AQ9BTU6 479 aa12.01□□□□□ -0.49
RFFL-204ENST00000414419 RPP25Q9BUL9 199 aaKnown RBP12.01□□□□□ -0.49
RFFL-204ENST00000414419 SNX25Q9H3E2 840 aa12.01□□□□□ -0.49
RFFL-204ENST00000414419 ZFP14Q9HCL3 533 aa12.01□□□□□ -0.49
RFFL-204ENST00000414419 GTF3C4Q9UKN8 822 aa12.01□□□□□ -0.49
RFFL-204ENST00000414419 CA14Q9ULX7 337 aa12.01□□□□□ -0.49
RFFL-204ENST00000414419 KMT2EQ8IZD2 1858 aa12.01□□□□□ -0.49
RFFL-204ENST00000414419 DENND4CQ5VZ89 1909 aa12.01□□□□□ -0.49
RFFL-204ENST00000414419 A0A1W2PRU2 124 aa12□□□□□ -0.49
RFFL-204ENST00000414419 LRRIQ3A6PVS8 624 aaPredicted RBP12□□□□□ -0.49
RFFL-204ENST00000414419 GABRDO14764 452 aa12□□□□□ -0.49
RFFL-204ENST00000414419 KINO60870 393 aaKnown RBP12□□□□□ -0.49
RFFL-204ENST00000414419 ECI2O75521 394 aa12□□□□□ -0.49
RFFL-204ENST00000414419 PDGFRBP09619 1106 aa12□□□□□ -0.49
RFFL-204ENST00000414419 KRT13P13646 458 aa12□□□□□ -0.49
RFFL-204ENST00000414419 GJA1P17302 382 aa12□□□□□ -0.49
RFFL-204ENST00000414419 GABRR2P28476 465 aa12□□□□□ -0.49
RFFL-204ENST00000414419 GNL1P36915 607 aaPredicted RBP12□□□□□ -0.49
RFFL-204ENST00000414419 CCR2P41597 374 aa12□□□□□ -0.49
RFFL-204ENST00000414419 RPL10AP62906 217 aaKnown RBP12□□□□□ -0.49
RFFL-204ENST00000414419 GPC5P78333 572 aa12□□□□□ -0.49
RFFL-204ENST00000414419 PFKPQ01813 784 aa12□□□□□ -0.49
RFFL-204ENST00000414419 ADAM9Q13443 819 aa12□□□□□ -0.49
RFFL-204ENST00000414419 SNW1Q13573 536 aaKnown RBP12□□□□□ -0.49
RFFL-204ENST00000414419 TEAD2Q15562 447 aa12□□□□□ -0.49
RFFL-204ENST00000414419 MAPRE1Q15691 268 aaKnown RBP12□□□□□ -0.49
RFFL-204ENST00000414419 ARHGAP15Q53QZ3 475 aa12□□□□□ -0.49
RFFL-204ENST00000414419 ASTLQ6HA08 431 aaPredicted RBP12□□□□□ -0.49
RFFL-204ENST00000414419 C4orf50Q6ZRC1 276 aa12□□□□□ -0.49
RFFL-204ENST00000414419 OSTM1Q86WC4 334 aa12□□□□□ -0.49
RFFL-204ENST00000414419 ENGASEQ8NFI3 743 aa12□□□□□ -0.49
RFFL-204ENST00000414419 OR6B3Q8NGW1 331 aa12□□□□□ -0.49
RFFL-204ENST00000414419 TMC2Q8TDI7 906 aa12□□□□□ -0.49
RFFL-204ENST00000414419 GPR152Q8TDT2 470 aa12□□□□□ -0.49
RFFL-204ENST00000414419 GIPC2Q8TF65 315 aa12□□□□□ -0.49
RFFL-204ENST00000414419 ZNF516Q92618 1163 aa12□□□□□ -0.49
RFFL-204ENST00000414419 ELSPBP1Q96BH3 223 aa12□□□□□ -0.49
RFFL-204ENST00000414419 FAM122AQ96E09 287 aa12□□□□□ -0.49
RFFL-204ENST00000414419 LPIN3Q9BQK8 851 aa12□□□□□ -0.49
RFFL-204ENST00000414419 SYT15Q9BQS2 421 aa12□□□□□ -0.49
RFFL-204ENST00000414419 GTPBP4Q9BZE4 634 aaKnown RBP12□□□□□ -0.49
RFFL-204ENST00000414419 DNAJC25Q9H1X3 360 aa12□□□□□ -0.49
RFFL-204ENST00000414419 ATXN3LQ9H3M9 355 aa12□□□□□ -0.49
RFFL-204ENST00000414419 ABCB6Q9NP58 842 aa12□□□□□ -0.49
RFFL-204ENST00000414419 SLC2A4RGQ9NR83 387 aa12□□□□□ -0.49
RFFL-204ENST00000414419 TMLHEQ9NVH6 421 aa12□□□□□ -0.49
RFFL-204ENST00000414419 NXF1Q9UBU9 619 aaKnown RBP12□□□□□ -0.49
RFFL-204ENST00000414419 CDH9Q9ULB4 789 aa12□□□□□ -0.49
RFFL-204ENST00000414419 MUC6Q6W4X9 2439 aa11.99□□□□□ -0.49
RFFL-204ENST00000414419 IKBKBO14920 756 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms