RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 TXNDC11Q6PKC3 985 aa20.95■□□□□ 0.94
HDAC11-205ENST00000404548 LONP2Q86WA8 852 aa20.95■□□□□ 0.94
HDAC11-205ENST00000404548 FAM200AQ8TCP9 573 aa20.95■□□□□ 0.94
HDAC11-205ENST00000404548 LPIN3Q9BQK8 851 aa20.95■□□□□ 0.94
HDAC11-205ENST00000404548 RTKNQ9BST9 563 aa20.95■□□□□ 0.94
HDAC11-205ENST00000404548 UPF2Q9HAU5 1272 aaKnown RBP20.95■□□□□ 0.94
HDAC11-205ENST00000404548 USP18Q9UMW8 372 aa20.95■□□□□ 0.94
HDAC11-205ENST00000404548 TPRP12270 2363 aaKnown RBP20.95■□□□□ 0.94
HDAC11-205ENST00000404548 SCN1AP35498 2009 aa20.94■□□□□ 0.94
HDAC11-205ENST00000404548 ACACBO00763 2458 aa20.94■□□□□ 0.94
HDAC11-205ENST00000404548 DDX6P26196 483 aaKnown RBP eCLIP20.94■□□□□ 0.94
HDAC11-205ENST00000404548 SOX9P48436 509 aa20.94■□□□□ 0.94
HDAC11-205ENST00000404548 ATXN1P54253 815 aaKnown RBP20.94■□□□□ 0.94
HDAC11-205ENST00000404548 WDR44Q5JSH3 913 aa20.94■□□□□ 0.94
HDAC11-205ENST00000404548 CRELD2Q6UXH1 353 aaPredicted RBP20.94■□□□□ 0.94
HDAC11-205ENST00000404548 DCP1BQ8IZD4 617 aaKnown RBP20.94■□□□□ 0.94
HDAC11-205ENST00000404548 ZNF560Q96MR9 790 aa20.94■□□□□ 0.94
HDAC11-205ENST00000404548 PYM1Q9BRP8 204 aaKnown RBP20.94■□□□□ 0.94
HDAC11-205ENST00000404548 PARD6AQ9NPB6 346 aa20.94■□□□□ 0.94
HDAC11-205ENST00000404548 THG1LQ9NWX6 298 aaKnown RBP20.94■□□□□ 0.94
HDAC11-205ENST00000404548 GTSE1Q9NYZ3 720 aa20.94■□□□□ 0.94
HDAC11-205ENST00000404548 KIF26AQ9ULI4 1882 aaPredicted RBP20.94■□□□□ 0.94
HDAC11-205ENST00000404548 KPNA7A9QM74 516 aa20.93■□□□□ 0.94
HDAC11-205ENST00000404548 TISP43B9A030 160 aa20.93■□□□□ 0.94
HDAC11-205ENST00000404548 FOXD2O60548 495 aaPredicted RBP20.93■□□□□ 0.94
HDAC11-205ENST00000404548 HAPLN1P10915 354 aaPredicted RBP20.93■□□□□ 0.94
HDAC11-205ENST00000404548 ADSSP30520 456 aa20.93■□□□□ 0.94
HDAC11-205ENST00000404548 PTPAQ15257 358 aa20.93■□□□□ 0.94
HDAC11-205ENST00000404548 WSCD1Q658N2 575 aa20.93■□□□□ 0.94
HDAC11-205ENST00000404548 EFCAB13Q8IY85 973 aa20.93■□□□□ 0.94
HDAC11-205ENST00000404548 LEO1Q8WVC0 666 aaPredicted RBP20.93■□□□□ 0.94
HDAC11-205ENST00000404548 POMGNT1Q8WZA1 660 aa20.93■□□□□ 0.94
HDAC11-205ENST00000404548 RBM12Q9NTZ6 932 aaKnown RBP20.93■□□□□ 0.94
HDAC11-205ENST00000404548 GAP43P17677 238 aa20.92■□□□□ 0.94
HDAC11-205ENST00000404548 CYP4F8P98187 520 aa20.92■□□□□ 0.94
HDAC11-205ENST00000404548 TAF12Q16514 161 aa20.92■□□□□ 0.94
HDAC11-205ENST00000404548 NFE2Q16621 373 aaPredicted RBP20.92■□□□□ 0.94
HDAC11-205ENST00000404548 ITPRIPL2Q3MIP1 535 aa20.92■□□□□ 0.94
HDAC11-205ENST00000404548 Q6ZS52 159 aa20.92■□□□□ 0.94
HDAC11-205ENST00000404548 LRRTM3Q86VH5 581 aa20.92■□□□□ 0.94
HDAC11-205ENST00000404548 SFR1Q86XK3 245 aa20.92■□□□□ 0.94
HDAC11-205ENST00000404548 CMTM8Q8IZV2 173 aa20.92■□□□□ 0.94
HDAC11-205ENST00000404548 SPATA18Q8TC71 538 aa20.92■□□□□ 0.94
HDAC11-205ENST00000404548 ZFYVE19Q96K21 471 aa20.92■□□□□ 0.94
HDAC11-205ENST00000404548 SLC46A2Q9BY10 475 aa20.92■□□□□ 0.94
HDAC11-205ENST00000404548 KIF9Q9HAQ2 790 aa20.92■□□□□ 0.94
HDAC11-205ENST00000404548 ABCB6Q9NP58 842 aa20.92■□□□□ 0.94
HDAC11-205ENST00000404548 OLFML3Q9NRN5 406 aa20.92■□□□□ 0.94
HDAC11-205ENST00000404548 CCDC39Q9UFE4 941 aa20.92■□□□□ 0.94
HDAC11-205ENST00000404548 EXOC7Q9UPT5 735 aa20.92■□□□□ 0.94
HDAC11-205ENST00000404548 MORC2Q9Y6X9 1032 aaPredicted RBP20.92■□□□□ 0.94
HDAC11-205ENST00000404548 PDCP20941 246 aa20.91■□□□□ 0.94
HDAC11-205ENST00000404548 TSPY1Q01534 308 aa20.91■□□□□ 0.94
HDAC11-205ENST00000404548 SIM2Q14190 667 aaPredicted RBP20.91■□□□□ 0.94
HDAC11-205ENST00000404548 TMEM150AQ86TG1 271 aa20.91■□□□□ 0.94
HDAC11-205ENST00000404548 BRSK2Q8IWQ3 736 aa20.91■□□□□ 0.94
HDAC11-205ENST00000404548 NETO1Q8TDF5 533 aa20.91■□□□□ 0.94
HDAC11-205ENST00000404548 EPSTI1Q96J88 318 aa20.91■□□□□ 0.94
HDAC11-205ENST00000404548 FAM83CQ9BQN1 747 aa20.91■□□□□ 0.94
HDAC11-205ENST00000404548 ABI2Q9NYB9 513 aaPredicted RBP20.91■□□□□ 0.94
HDAC11-205ENST00000404548 PCDHB5Q9Y5E4 795 aa20.91■□□□□ 0.94
HDAC11-205ENST00000404548 SRPRBQ9Y5M8 271 aaKnown RBP20.91■□□□□ 0.94
HDAC11-205ENST00000404548 CCDC163A0A0D9SF12 145 aa20.9■□□□□ 0.94
HDAC11-205ENST00000404548 CHURC1-FNTBB4DL54 471 aa20.9■□□□□ 0.94
HDAC11-205ENST00000404548 HRO43593 1189 aa20.9■□□□□ 0.94
HDAC11-205ENST00000404548 LDHAP00338 332 aaKnown RBP20.9■□□□□ 0.94
HDAC11-205ENST00000404548 HMGA1P17096 107 aaKnown RBP20.9■□□□□ 0.94
HDAC11-205ENST00000404548 AVPR1AP37288 418 aa20.9■□□□□ 0.94
HDAC11-205ENST00000404548 FNTBP49356 437 aa20.9■□□□□ 0.94
HDAC11-205ENST00000404548 NLRP12P59046 1061 aa20.9■□□□□ 0.94
HDAC11-205ENST00000404548 ALCAMQ13740 583 aa20.9■□□□□ 0.94
HDAC11-205ENST00000404548 PON2Q15165 354 aa20.9■□□□□ 0.94
HDAC11-205ENST00000404548 L1TD1Q5T7N2 865 aaKnown RBP20.9■□□□□ 0.94
HDAC11-205ENST00000404548 PRR23BQ6ZRT6 265 aa20.9■□□□□ 0.94
HDAC11-205ENST00000404548 WDR5BQ86VZ2 330 aa20.9■□□□□ 0.94
HDAC11-205ENST00000404548 LRRC52Q8N7C0 313 aa20.9■□□□□ 0.94
HDAC11-205ENST00000404548 DNAJC19Q96DA6 116 aa20.9■□□□□ 0.94
HDAC11-205ENST00000404548 ACBD6Q9BR61 282 aa20.9■□□□□ 0.94
HDAC11-205ENST00000404548 MRPL44Q9H9J2 332 aaKnown RBP20.9■□□□□ 0.94
HDAC11-205ENST00000404548 FBXO2Q9UK22 296 aaPredicted RBP20.9■□□□□ 0.94
HDAC11-205ENST00000404548 F11P03951 625 aa20.89■□□□□ 0.93
HDAC11-205ENST00000404548 CSH1P0DML2 217 aa20.89■□□□□ 0.93
HDAC11-205ENST00000404548 CSH2P0DML3 217 aa20.89■□□□□ 0.93
HDAC11-205ENST00000404548 GARTP22102 1010 aa20.89■□□□□ 0.93
HDAC11-205ENST00000404548 TXLNAP40222 546 aa20.89■□□□□ 0.93
HDAC11-205ENST00000404548 TNK2Q07912 1038 aa20.89■□□□□ 0.93
HDAC11-205ENST00000404548 DMWDQ09019 674 aa20.89■□□□□ 0.93
HDAC11-205ENST00000404548 SPEM2Q0P670 501 aa20.89■□□□□ 0.93
HDAC11-205ENST00000404548 CUL4AQ13619 759 aa20.89■□□□□ 0.93
HDAC11-205ENST00000404548 ZNF268Q14587 947 aaPredicted RBP20.89■□□□□ 0.93
HDAC11-205ENST00000404548 CSRP2Q16527 193 aa20.89■□□□□ 0.93
HDAC11-205ENST00000404548 USP49Q70CQ1 688 aa20.89■□□□□ 0.93
HDAC11-205ENST00000404548 DYMQ7RTS9 669 aa20.89■□□□□ 0.93
HDAC11-205ENST00000404548 GPIHBP1Q8IV16 184 aa20.89■□□□□ 0.93
HDAC11-205ENST00000404548 TMEM86AQ8N2M4 240 aa20.89■□□□□ 0.93
HDAC11-205ENST00000404548 GIPC2Q8TF65 315 aa20.89■□□□□ 0.93
HDAC11-205ENST00000404548 TRMT2BQ96GJ1 504 aaKnown RBP20.89■□□□□ 0.93
HDAC11-205ENST00000404548 ACCSQ96QU6 501 aa20.89■□□□□ 0.93
HDAC11-205ENST00000404548 PCDHB13Q9Y5F0 798 aa20.89■□□□□ 0.93
HDAC11-205ENST00000404548 FRMD3A2A2Y4 597 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms