RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 SMAD4Q13485 552 aaKnown RBP8.99□□□□□ -0.97
BRCC3-205ENST00000399026 CCDC142Q17RM4 750 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 DPCR1Q3MIW9 517 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 DCAF17Q5H9S7 520 aaPredicted RBP8.99□□□□□ -0.97
BRCC3-205ENST00000399026 C1orf220Q5T0J3 134 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 OVOS1Q6IE37 1185 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 CENPPQ6IPU0 288 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 PDXDC1Q6P996 788 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 SYCE2Q6PIF2 218 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 TMC5Q6UXY8 1006 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 SCARA5Q6ZMJ2 495 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 ANKS3Q6ZW76 656 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 TRAPPC11Q7Z392 1133 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 PPFIBP1Q86W92 1011 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 TRIML1Q8N9V2 468 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 SMRP1Q8NCR6 262 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 APPL2Q8NEU8 664 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 PARD3BQ8TEW8 1205 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 NECAB3Q96P71 396 aaPredicted RBP8.99□□□□□ -0.97
BRCC3-205ENST00000399026 ASB2Q96Q27 587 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 TMEM209Q96SK2 561 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.99□□□□□ -0.97
BRCC3-205ENST00000399026 DZANK1Q9NVP4 752 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 FNIP2Q9P278 1114 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 LIMD1Q9UGP4 676 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 FBXL5Q9UKA1 691 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 FBXW11Q9UKB1 542 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 L1RE1Q9UN81 338 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 USP15Q9Y4E8 981 aaPredicted RBP8.99□□□□□ -0.97
BRCC3-205ENST00000399026 SNX9Q9Y5X1 595 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 VCANP13611 3396 aa8.99□□□□□ -0.97
BRCC3-205ENST00000399026 KPNA7A9QM74 516 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 CETN3O15182 167 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 SLC16A3O15427 465 aaKnown RBP8.98□□□□□ -0.97
BRCC3-205ENST00000399026 MBTPS2O43462 519 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 PHACTR2O75167 634 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 MBD3O95983 291 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 KRT13P13646 458 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 TYMPP19971 482 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 RPL13P26373 211 aaKnown RBP8.98□□□□□ -0.97
BRCC3-205ENST00000399026 PSMC2P35998 433 aaKnown RBP8.98□□□□□ -0.97
BRCC3-205ENST00000399026 PNPLA4P41247 253 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 PIK3CAP42336 1068 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 GCLMP48507 274 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 VAMP7P51809 220 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 MYL6P60660 151 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 RBP5P82980 135 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 MYBPC2Q14324 1141 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 DUOXA2Q1HG44 320 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 LINC01559Q495D7 138 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 TCERG1LQ5VWI1 586 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 WSCD1Q658N2 575 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 TTI2Q6NXR4 508 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 TMEM184AQ6ZMB5 413 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 INTS8Q75QN2 995 aaKnown RBP8.98□□□□□ -0.97
BRCC3-205ENST00000399026 USP37Q86T82 979 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 OSTM1Q86WC4 334 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 ZC3H3Q8IXZ2 948 aaKnown RBP8.98□□□□□ -0.97
BRCC3-205ENST00000399026 PDCL2Q8N4E4 241 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 LRRC52Q8N7C0 313 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 KREMEN2Q8NCW0 462 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 OR10T2Q8NGX3 314 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 TMEM174Q8WUU8 243 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 ATXN2LQ8WWM7 1075 aaKnown RBP8.98□□□□□ -0.97
BRCC3-205ENST00000399026 BORCS6Q96GS4 357 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 DHTKD1Q96HY7 919 aaPredicted RBP8.98□□□□□ -0.97
BRCC3-205ENST00000399026 HPDLQ96IR7 371 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 PGLYRP2Q96PD5 576 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 DUSP9Q99956 384 aaKnown RBP8.98□□□□□ -0.97
BRCC3-205ENST00000399026 GTPBP4Q9BZE4 634 aaKnown RBP8.98□□□□□ -0.97
BRCC3-205ENST00000399026 SFXN1Q9H9B4 322 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 POLIQ9UNA4 740 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 R3HCC1Q9Y3T6 440 aaKnown RBP8.98□□□□□ -0.97
BRCC3-205ENST00000399026 BACE2Q9Y5Z0 518 aa8.98□□□□□ -0.97
BRCC3-205ENST00000399026 BICDL2A1A5D9 508 aa8.97□□□□□ -0.97
BRCC3-205ENST00000399026 H7C4K7 107 aa8.97□□□□□ -0.97
BRCC3-205ENST00000399026 MAPK13O15264 365 aa8.97□□□□□ -0.97
BRCC3-205ENST00000399026 CCL16O15467 120 aa8.97□□□□□ -0.97
BRCC3-205ENST00000399026 TBC1D4O60343 1298 aa8.97□□□□□ -0.97
BRCC3-205ENST00000399026 VNN1O95497 513 aa8.97□□□□□ -0.97
BRCC3-205ENST00000399026 HLA-DRAP01903 254 aa8.97□□□□□ -0.97
BRCC3-205ENST00000399026 C8AP07357 584 aa8.97□□□□□ -0.97
BRCC3-205ENST00000399026 ACAT1P24752 427 aaKnown RBP8.97□□□□□ -0.97
BRCC3-205ENST00000399026 RAP1GAPP47736 663 aa8.97□□□□□ -0.97
BRCC3-205ENST00000399026 PPP3CAQ08209 521 aa8.97□□□□□ -0.97
BRCC3-205ENST00000399026 MYO1EQ12965 1108 aa8.97□□□□□ -0.97
BRCC3-205ENST00000399026 TRPC3Q13507 836 aa8.97□□□□□ -0.97
BRCC3-205ENST00000399026 NCOA4Q13772 614 aa8.97□□□□□ -0.97
BRCC3-205ENST00000399026 RAB33AQ14088 237 aa8.97□□□□□ -0.97
BRCC3-205ENST00000399026 MRPL58Q14197 206 aaKnown RBP8.97□□□□□ -0.97
BRCC3-205ENST00000399026 QPCTQ16769 361 aa8.97□□□□□ -0.97
BRCC3-205ENST00000399026 AAK1Q2M2I8 961 aa8.97□□□□□ -0.97
BRCC3-205ENST00000399026 ZNF699Q32M78 642 aa8.97□□□□□ -0.97
BRCC3-205ENST00000399026 CCDC40Q4G0X9 1142 aa8.97□□□□□ -0.97
BRCC3-205ENST00000399026 LIN9Q5TKA1 542 aa8.97□□□□□ -0.97
BRCC3-205ENST00000399026 SPOPLQ6IQ16 392 aa8.97□□□□□ -0.97
BRCC3-205ENST00000399026 SLC8B1Q6J4K2 584 aa8.97□□□□□ -0.97
BRCC3-205ENST00000399026 METTL23Q86XA0 190 aa8.97□□□□□ -0.97
BRCC3-205ENST00000399026 GPR65Q8IYL9 337 aa8.97□□□□□ -0.97
BRCC3-205ENST00000399026 ADGRF2Q8IZF7 708 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms