RNA–Protein interactions for RNA: ENST00000398646.3

FAM3B-202, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 5 BASIC

Gene FAM3B, Length 1,026 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-202ENST00000398646 SRGAP2O75044 1071 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 MTA2O94776 668 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 MICAL2O94851 1124 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 PARNO95453 639 aaKnown RBP10.39□□□□□ -0.75
FAM3B-202ENST00000398646 FAM163BP0C2L3 166 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 PRLRP16471 622 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 TCP1P17987 556 aaKnown RBP10.39□□□□□ -0.75
FAM3B-202ENST00000398646 WARSP23381 471 aaKnown RBP10.39□□□□□ -0.75
FAM3B-202ENST00000398646 CDH5P33151 784 aaPredicted RBP10.39□□□□□ -0.75
FAM3B-202ENST00000398646 GNL1P36915 607 aaPredicted RBP10.39□□□□□ -0.75
FAM3B-202ENST00000398646 GJA8P48165 433 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 CLCNKBP51801 687 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 AFF1P51825 1210 aaKnown RBP10.39□□□□□ -0.75
FAM3B-202ENST00000398646 CCL23P55773 120 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 LILRA4P59901 499 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 TLE2Q04725 743 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 RPS6KA1Q15418 735 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 SOWAHAQ2M3V2 549 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 PLEKHG4Q58EX7 1191 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 DENND1BQ6P3S1 775 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 GLB1LQ6UWU2 654 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 MMS22LQ6ZRQ5 1243 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 MON1BQ7L1V2 547 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 ANKRD33Q7Z3H0 272 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 PEX26Q7Z412 305 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 SLFN11Q7Z7L1 901 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 PHLDB2Q86SQ0 1253 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 ACOT1Q86TX2 421 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 ERICH1Q86X53 443 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 LRRC57Q8N9N7 239 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 ANKLE1Q8NAG6 615 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 MSANTD4Q8NCY6 345 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 DBF4BQ8NFT6 615 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 URGCPQ8TCY9 931 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 LINC01599Q8WXQ3 324 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 APBB2Q92870 758 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 DDX27Q96GQ7 796 aaKnown RBP10.39□□□□□ -0.75
FAM3B-202ENST00000398646 UROC1Q96N76 676 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 TOX2Q96NM4 488 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 ZSWIM1Q9BR11 485 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 PPP1R12CQ9BZL4 782 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 LHX5Q9H2C1 402 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 HIPK3Q9H422 1215 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 MRPL47Q9HD33 250 aaKnown RBP10.39□□□□□ -0.75
FAM3B-202ENST00000398646 CHORDC1Q9UHD1 332 aaPredicted RBP10.39□□□□□ -0.75
FAM3B-202ENST00000398646 SNX12Q9UMY4 172 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 L1RE1Q9UN81 338 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 ATP11BQ9Y2G3 1177 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 SCINQ9Y6U3 715 aa10.39□□□□□ -0.75
FAM3B-202ENST00000398646 M0QYV0 167 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 O00370 1275 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 ENPP3O14638 875 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 BUB1BO60566 1050 aaPredicted RBP10.38□□□□□ -0.75
FAM3B-202ENST00000398646 KIF4AO95239 1232 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 PDGFRBP09619 1106 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 HSPA1AP0DMV8 641 aaKnown RBP10.38□□□□□ -0.75
FAM3B-202ENST00000398646 HSPA1BP0DMV9 641 aaKnown RBP10.38□□□□□ -0.75
FAM3B-202ENST00000398646 COL6A1P12109 1028 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 MMP8P22894 467 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 PAX3P23760 479 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 RRM1P23921 792 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 GTF2F1P35269 517 aaKnown RBP eCLIP10.38□□□□□ -0.753e-8■■■■□ 21.5
FAM3B-202ENST00000398646 DNA2P51530 1060 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 CKAP4Q07065 602 aaKnown RBP10.38□□□□□ -0.75
FAM3B-202ENST00000398646 FAAP100Q0VG06 881 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 TUSC3Q13454 348 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 MESDQ14696 234 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 GPNMBQ14956 572 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 PTPROQ16827 1216 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 C2CD6Q53TS8 623 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 C1orf53Q5VUE5 145 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 C11orf63Q6NUN7 778 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 LCLAT1Q6UWP7 414 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 LIMS2Q7Z4I7 341 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 ADGRF2Q8IZF7 708 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 PDCL2Q8N4E4 241 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 WDTC1Q8N5D0 677 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 DIS3LQ8TF46 1054 aaKnown RBP10.38□□□□□ -0.75
FAM3B-202ENST00000398646 KBTBD7Q8WVZ9 684 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 SCLYQ96I15 445 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 CAPZA3Q96KX2 299 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 SENP8Q96LD8 212 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 OSBPL9Q96SU4 736 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 TLR10Q9BXR5 811 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 C11orf49Q9H6J7 331 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 ELAC1Q9H777 363 aaKnown RBP10.38□□□□□ -0.75
FAM3B-202ENST00000398646 TMEM161AQ9NX61 479 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 HESX1Q9UBX0 185 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 TSPAN16Q9UKR8 245 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 LRFN2Q9ULH4 789 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 PACSIN2Q9UNF0 486 aaPredicted RBP10.38□□□□□ -0.75
FAM3B-202ENST00000398646 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.38□□□□□ -0.75
FAM3B-202ENST00000398646 PCDHB7Q9Y5E2 793 aa10.38□□□□□ -0.75
FAM3B-202ENST00000398646 CTAGE15A4D2H0 777 aa10.37□□□□□ -0.75
FAM3B-202ENST00000398646 INPPL1O15357 1258 aa10.37□□□□□ -0.75
FAM3B-202ENST00000398646 CTAGE8P0CG41 777 aa10.37□□□□□ -0.75
FAM3B-202ENST00000398646 FGFR1P11362 822 aa10.37□□□□□ -0.75
FAM3B-202ENST00000398646 CAPN2P17655 700 aa10.37□□□□□ -0.75
FAM3B-202ENST00000398646 PTP4A2Q12974 167 aa10.37□□□□□ -0.75
FAM3B-202ENST00000398646 UPP1Q16831 310 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms