RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 LINC01599Q8WXQ3 324 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 HEMGNQ9BXL5 484 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 RHOBTB2Q9BYZ6 727 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 DPH5Q9H2P9 285 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 PCDHGC3Q9UN70 934 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 TNFSF13BQ9Y275 285 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 SNX24Q9Y343 169 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 F7P08709 466 aaPredicted RBP8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 STAG3L1P0CL83 205 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 PHKA2P46019 1235 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 RPS6KA1Q15418 735 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 DUSP28Q4G0W2 176 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 GLRA4Q5JXX5 417 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 PPP1R26Q5T8A7 1209 aaPredicted RBP8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 PEX26Q7Z412 305 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 ZMIZ2Q8NF64 920 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 SLITRK1Q96PX8 696 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 PKMYT1Q99640 499 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 ERP44Q9BS26 406 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 KIF9Q9HAQ2 790 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 AKAP5P24588 427 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 IGBP1P78318 339 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 MGAT3Q09327 533 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 ALCAMQ13740 583 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 C10orf76Q5T2E6 689 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 C6orf89Q6UWU4 347 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 NPNTQ6UXI9 565 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 HDXQ7Z353 690 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 WDR49Q8IV35 697 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 PQLC3Q8N755 202 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 RPS6KC1Q96S38 1066 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 UBN1Q9NPG3 1134 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 ETNK2Q9NVF9 386 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 PCDHB2Q9Y5E7 798 aa8.99□□□□□ -0.97
GAPVD1-204ENST00000394083 DMXL1Q9Y485 3027 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 ZNF106Q9H2Y7 1883 aaKnown RBP8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 H3BRB1 525 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 PGRMC1O00264 195 aaKnown RBP8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 OGTO15294 1046 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 TMEM63AO94886 807 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 ITGB3P05106 788 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 TUBB2AQ13885 445 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 EFTUD2Q15029 972 aaKnown RBP eCLIP8.98□□□□□ -0.971e-6■■■■□ 20
GAPVD1-204ENST00000394083 CFAP221Q4G0U5 840 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 MPZL3Q6UWV2 235 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 RTN4RL1Q86UN2 441 aaPredicted RBP8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 TUBB2BQ9BVA1 445 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 TUT1Q9H6E5 874 aaKnown RBP8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 PSD3Q9NYI0 1048 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 GTF2IRD1Q9UHL9 959 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 ANAPC7Q9UJX3 599 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 PLAAQ9Y263 795 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 GSRP00390 522 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 GSCP56915 257 aaPredicted RBP8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 SKOR1P84550 965 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 ATF7IP2Q5U623 682 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 SHCBP1Q8NEM2 672 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 IFT81Q8WYA0 676 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 TRIM31Q9BZY9 425 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 CCL15-CCL14A0A0B4J2E2 113 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 COILP38432 576 aaPredicted RBP8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 CCL15Q16663 113 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 C8orf74Q6P047 294 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 TINF2Q9BSI4 451 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 DCLK3Q9C098 648 aa8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 AVENQ9NQS1 362 aaPredicted RBP8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 DNAJC17Q9NVM6 304 aaKnown RBP8.98□□□□□ -0.97
GAPVD1-204ENST00000394083 PROSCO94903 275 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 VNN2O95498 520 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 GRM1Q13255 1194 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 OLIG2Q13516 323 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 VOPP1Q96AW1 172 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 ZNF653Q96CK0 615 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 MAF1Q9H063 256 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 ERICH4A6NGS2 130 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 TMEM110-MUSTN1A8MSY1 372 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 KRIT1O00522 736 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 PRKCGP05129 697 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 GNA15P30679 374 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 ADCY1Q08828 1119 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 PDCLQ13371 301 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 SLC29A2Q14542 456 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 ZNF467Q7Z7K2 595 aaPredicted RBP8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 STKLD1Q8NE28 680 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 SLC35B2Q8TB61 432 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 GOLGA5Q8TBA6 731 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 SLC35F5Q8WV83 523 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 MCRS1Q96EZ8 462 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 USP29Q9HBJ7 922 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 PTPN22Q9Y2R2 807 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 HHLA1C9JL84 531 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 RFX1P22670 979 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 RFC5P40937 340 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 LIG4P49917 911 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 ACVR2BQ13705 512 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 TRIM71Q2Q1W2 868 aaKnown RBP8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 FNBP1LQ5T0N5 605 aa8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 CCDC47Q96A33 483 aaKnown RBP8.97□□□□□ -0.97
GAPVD1-204ENST00000394083 MCEEQ96PE7 176 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms