RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 TTC19Q6DKK2 380 aaPredicted RBP9.57□□□□□ -0.88
TDP1-202ENST00000393452 DENND1BQ6P3S1 775 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 DRICH1Q6PGQ1 229 aaPredicted RBP9.57□□□□□ -0.88
TDP1-202ENST00000393452 ZNF410Q86VK4 478 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 HOOK3Q86VS8 718 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 NT5DC4Q86YG4 428 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 KIAA0319LQ8IZA0 1049 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 SLC4A11Q8NBS3 891 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 FNIP1Q8TF40 1166 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 SNF8Q96H20 258 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 CPB2Q96IY4 423 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 RBM41Q96IZ5 413 aaKnown RBP9.57□□□□□ -0.88
TDP1-202ENST00000393452 SLITRK1Q96PX8 696 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 HEMGNQ9BXL5 484 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 CENPHQ9H3R5 247 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 ABHD16BQ9H3Z7 469 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 ZNF408Q9H9D4 720 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 CYTH4Q9UIA0 394 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 USTQ9Y2C2 406 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 C2CD2Q9Y426 696 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 SIGLEC16A6NMB1 481 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 RIPK2O43353 540 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 STAU1O95793 577 aaKnown RBP9.57□□□□□ -0.88
TDP1-202ENST00000393452 POLR2BP30876 1174 aaKnown RBP9.57□□□□□ -0.88
TDP1-202ENST00000393452 CETN2P41208 172 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 RAP1GAPP47736 663 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 CDH8P55286 799 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 COPS2P61201 443 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 CAV1Q03135 178 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 GRIK4Q16099 956 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 FAM110CQ1W6H9 321 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 ATP13A4Q4VNC1 1196 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 DCUN1D2Q6PH85 259 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 TRMT10CQ7L0Y3 403 aaKnown RBP9.57□□□□□ -0.88
TDP1-202ENST00000393452 CROCCP2Q86T23 111 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 DPP9Q86TI2 863 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 TMEM130Q8N3G9 435 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 BCAS4Q8TDM0 211 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 TINF2Q9BSI4 451 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 TSPYL1Q9H0U9 437 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 SMYD3Q9H7B4 428 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 ASIC3Q9UHC3 531 aa9.57□□□□□ -0.88
TDP1-202ENST00000393452 NOVA2Q9UNW9 492 aaKnown RBP9.57□□□□□ -0.88
TDP1-202ENST00000393452 DCDC2CA8MYV0 355 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 CD19P15391 556 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 HPDP32754 393 aaPredicted RBP9.56□□□□□ -0.88
TDP1-202ENST00000393452 PPP2R2AP63151 447 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 PTPN11Q06124 597 aaPredicted RBP9.56□□□□□ -0.88
TDP1-202ENST00000393452 ADCY2Q08462 1091 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 INCA1Q0VD86 236 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 ACVR2BQ13705 512 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 BYSLQ13895 437 aaKnown RBP9.56□□□□□ -0.88
TDP1-202ENST00000393452 TMEM132DQ14C87 1099 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 DGKDQ16760 1214 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 CYP4A22Q5TCH4 519 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 IQSEC1Q6DN90 963 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 POLNQ7Z5Q5 900 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 TMEM176AQ96HP8 235 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 TWNKQ96RR1 684 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 PPP1R16BQ96T49 567 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 TRAIPQ9BWF2 469 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 ELOVL4Q9GZR5 314 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 EPN3Q9H201 632 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 WDR35Q9P2L0 1181 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 ITGA11Q9UKX5 1188 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 RALGAPA2Q2PPJ7 1873 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 SCN1AP35498 2009 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 ADCY6O43306 1168 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 CAND2O75155 1236 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 ITGBL1O95965 494 aaPredicted RBP9.56□□□□□ -0.88
TDP1-202ENST00000393452 P4HA1P13674 534 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 FGFR4P22455 802 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 KLRC2P26717 231 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 RFC1P35251 1148 aaPredicted RBP9.56□□□□□ -0.88
TDP1-202ENST00000393452 GJC1P36383 396 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 SSR1P43307 286 aaKnown RBP9.56□□□□□ -0.88
TDP1-202ENST00000393452 MAGOHP61326 146 aaKnown RBP9.56□□□□□ -0.88
TDP1-202ENST00000393452 PTGISQ16647 500 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 TNFAIP8L3Q5GJ75 292 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 UBAP2Q5T6F2 1119 aaKnown RBP9.56□□□□□ -0.88
TDP1-202ENST00000393452 SPRYD7Q5W111 196 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 TXNRD3NBQ6F5E7 133 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 MFSD7Q6UXD7 560 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 CCDC89Q8N998 374 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 NLRP7Q8WX94 980 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 HPDLQ96IR7 371 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 ACAP3Q96P50 834 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 CPXM1Q96SM3 734 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 PARK7Q99497 189 aaKnown RBP9.56□□□□□ -0.88
TDP1-202ENST00000393452 PTPN18Q99952 460 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 GBA2Q9HCG7 927 aaPredicted RBP9.56□□□□□ -0.88
TDP1-202ENST00000393452 DDX56Q9NY93 547 aaKnown RBP9.56□□□□□ -0.88
TDP1-202ENST00000393452 HMGXB4Q9UGU5 601 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.56□□□□□ -0.88
TDP1-202ENST00000393452 CLEC11AQ9Y240 323 aa9.56□□□□□ -0.88
TDP1-202ENST00000393452 hCG_1818297A0A087WSY0 165 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 RRN3P2A6NIE6 340 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 LIASO43766 372 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 TJP3O95049 919 aa9.55□□□□□ -0.88
TDP1-202ENST00000393452 HMGCRP04035 888 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms