RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 LRRD1A4D1F6 860 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 H3BRB1 525 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 EBAG9O00559 213 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 SNAI1O95863 264 aaPredicted RBP16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 GAS8O95995 478 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 RAD23BP54727 409 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 SLC10A6Q3KNW5 377 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 HP1BP3Q5SSJ5 553 aaPredicted RBP16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 ATL2Q8NHH9 583 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 EXD1Q8NHP7 514 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 SNF8Q96H20 258 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 L3MBTL3Q96JM7 780 aaPredicted RBP16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 SLITRK1Q96PX8 696 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 CPXM1Q96SM3 734 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 C16orf70Q9BSU1 422 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 ELOVL4Q9GZR5 314 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 FAM49AQ9H0Q0 323 aaPredicted RBP16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 TUT1Q9H6E5 874 aaKnown RBP16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 SYNCQ9H7C4 482 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 PNMA3Q9UL41 463 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 RGS16O15492 202 aaPredicted RBP16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 ADCY6O43306 1168 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 RARGP13631 454 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 EIF3BP55884 814 aaKnown RBP16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 PTK6Q13882 451 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 KYNUQ16719 465 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 KIZQ2M2Z5 673 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 ZNF365Q70YC5 407 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 HOOK3Q86VS8 718 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 NLRP14Q86W24 1093 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 TAB3Q8N5C8 712 aaPredicted RBP16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 UBA3Q8TBC4 463 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 BRI3BPQ8WY22 251 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 RUNDC3BQ96NL0 473 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 CCT8L2Q96SF2 557 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 ANAPC5Q9UJX4 755 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 AGAP1Q9UPQ3 857 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 CEP83Q9Y592 693 aa16.9■□□□□ 0.3
CNKSR1-202ENST00000374253 PSMC1P62191 440 aaKnown RBP16.89■□□□□ 0.29
CNKSR1-202ENST00000374253 ZNF484Q5JVG2 852 aa16.89■□□□□ 0.29
CNKSR1-202ENST00000374253 EMC10Q5UCC4 262 aa16.89■□□□□ 0.29
CNKSR1-202ENST00000374253 ARFGAP2Q8N6H7 521 aa16.89■□□□□ 0.29
CNKSR1-202ENST00000374253 MYCBPAPQ8TBZ2 947 aa16.89■□□□□ 0.29
CNKSR1-202ENST00000374253 LENG1Q96BZ8 264 aaPredicted RBP16.89■□□□□ 0.29
CNKSR1-202ENST00000374253 MS4A4AQ96JQ5 239 aa16.89■□□□□ 0.29
CNKSR1-202ENST00000374253 CTNNAL1Q9UBT7 734 aa16.89■□□□□ 0.29
CNKSR1-202ENST00000374253 LSM8O95777 96 aaKnown RBP16.89■□□□□ 0.29
CNKSR1-202ENST00000374253 SMPD1P17405 629 aa16.89■□□□□ 0.29
CNKSR1-202ENST00000374253 PSMA2P25787 234 aa16.89■□□□□ 0.29
CNKSR1-202ENST00000374253 CDR1P51861 262 aa16.89■□□□□ 0.29
CNKSR1-202ENST00000374253 SLMAPQ14BN4 828 aa16.89■□□□□ 0.29
CNKSR1-202ENST00000374253 PRAMEF19Q5SWL8 479 aa16.89■□□□□ 0.29
CNKSR1-202ENST00000374253 MTHFD1LQ6UB35 978 aa16.89■□□□□ 0.29
CNKSR1-202ENST00000374253 SLC4A11Q8NBS3 891 aa16.89■□□□□ 0.29
CNKSR1-202ENST00000374253 SHCBP1Q8NEM2 672 aa16.89■□□□□ 0.29
CNKSR1-202ENST00000374253 ZNF473Q8WTR7 871 aaKnown RBP16.89■□□□□ 0.29
CNKSR1-202ENST00000374253 TLCD1Q96CP7 247 aa16.89■□□□□ 0.29
CNKSR1-202ENST00000374253 SETD4Q9NVD3 440 aa16.89■□□□□ 0.29
CNKSR1-202ENST00000374253 WHRNQ9P202 907 aa16.89■□□□□ 0.29
CNKSR1-202ENST00000374253 PCSK1NQ9UHG2 260 aa16.89■□□□□ 0.29
CNKSR1-202ENST00000374253 PLXNA1Q9UIW2 1896 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 ASAP2O43150 1006 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 ERBB2P04626 1255 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 CCNA1P78396 465 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 PPP1R15BQ5SWA1 713 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 ILDR2Q71H61 639 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 PPTC7Q8NI37 304 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 MAIP1Q8WWC4 291 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 SLCO2A1Q92959 643 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 METTL5Q9NRN9 209 aaKnown RBP16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 ZNF148Q9UQR1 794 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 HES2Q9Y543 173 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 KRT3P12035 628 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 EIF4BP23588 611 aaKnown RBP16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 IL1R2P27930 398 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 GBP1P32455 592 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 CCNG2Q16589 344 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 P3H1Q32P28 736 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 IZUMO3Q5VZ72 239 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 RHBDF2Q6PJF5 856 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 SPOCD1Q6ZMY3 1216 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 B4GALNT4Q76KP1 1039 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 ARFGAP1Q8N6T3 406 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 C3orf20Q8ND61 904 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 GRK7Q8WTQ7 553 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 C9orf72Q96LT7 481 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 HEXIM2Q96MH2 286 aaKnown RBP16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 KATNBL1Q9H079 304 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 FAM169AQ9Y6X4 670 aa16.88■□□□□ 0.29
CNKSR1-202ENST00000374253 M0QYV0 167 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 RASGRF2O14827 1237 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 IL18RAPO95256 599 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 CD48P09326 243 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 ITIH2P19823 946 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 PLCB3Q01970 1234 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 TAF5Q15542 800 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 GRIK4Q16099 956 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 QPCTQ16769 361 aa16.87■□□□□ 0.29
CNKSR1-202ENST00000374253 RAB6CQ53S08 254 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms