RNA–Protein interactions for RNA: ENST00000215794.7

USP18-201, Transcript of ubiquitin specific peptidase 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP18, Length 2,129 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP18-201ENST00000215794 SMIM10L2BP0DMW5 78 aa19.23■□□□□ 0.67
USP18-201ENST00000215794 MMP8P22894 467 aa19.23■□□□□ 0.67
USP18-201ENST00000215794 GJC1P36383 396 aa19.23■□□□□ 0.67
USP18-201ENST00000215794 PSEN2P49810 448 aa19.23■□□□□ 0.67
USP18-201ENST00000215794 RPL7AP62424 266 aaKnown RBP19.23■□□□□ 0.67
USP18-201ENST00000215794 ZNF844Q08AG5 666 aa19.23■□□□□ 0.67
USP18-201ENST00000215794 SNX1Q13596 522 aa19.23■□□□□ 0.67
USP18-201ENST00000215794 GRIK4Q16099 956 aa19.23■□□□□ 0.67
USP18-201ENST00000215794 LEKR1Q6ZMV7 388 aa19.23■□□□□ 0.67
USP18-201ENST00000215794 ATG4AQ8WYN0 398 aa19.23■□□□□ 0.67
USP18-201ENST00000215794 TXLNGYQ9BZA5 131 aa19.23■□□□□ 0.67
USP18-201ENST00000215794 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.23■□□□□ 0.67
USP18-201ENST00000215794 RPF1Q9H9Y2 349 aaKnown RBP19.23■□□□□ 0.67
USP18-201ENST00000215794 SPC25Q9HBM1 224 aa19.23■□□□□ 0.67
USP18-201ENST00000215794 CHST7Q9NS84 486 aa19.23■□□□□ 0.67
USP18-201ENST00000215794 TRIP12Q14669 1992 aaPredicted RBP19.23■□□□□ 0.67
USP18-201ENST00000215794 KAT6AQ92794 2004 aa19.23■□□□□ 0.67
USP18-201ENST00000215794 LACTBL1A8MY62 500 aa19.22■□□□□ 0.67
USP18-201ENST00000215794 PHKA2P46019 1235 aa19.22■□□□□ 0.67
USP18-201ENST00000215794 ATP1A2P50993 1020 aa19.22■□□□□ 0.67
USP18-201ENST00000215794 LRIG3Q6UXM1 1119 aa19.22■□□□□ 0.67
USP18-201ENST00000215794 C12orf50Q8NA57 414 aaPredicted RBP19.22■□□□□ 0.67
USP18-201ENST00000215794 VCPIP1Q96JH7 1222 aa19.22■□□□□ 0.67
USP18-201ENST00000215794 NFKBIZQ9BYH8 718 aa19.22■□□□□ 0.67
USP18-201ENST00000215794 PDZD7Q9H5P4 517 aa19.22■□□□□ 0.67
USP18-201ENST00000215794 MRPL47Q9HD33 250 aaKnown RBP19.22■□□□□ 0.67
USP18-201ENST00000215794 PRMT7Q9NVM4 692 aaPredicted RBP19.22■□□□□ 0.67
USP18-201ENST00000215794 FRMPD3Q5JV73 1810 aa19.22■□□□□ 0.67
USP18-201ENST00000215794 SHOX2O60902 331 aaPredicted RBP19.22■□□□□ 0.67
USP18-201ENST00000215794 STAG3L1P0CL83 205 aa19.22■□□□□ 0.67
USP18-201ENST00000215794 TCF4P15884 667 aa19.22■□□□□ 0.67
USP18-201ENST00000215794 ORC1Q13415 861 aa19.22■□□□□ 0.67
USP18-201ENST00000215794 SGO2Q562F6 1265 aa19.22■□□□□ 0.67
USP18-201ENST00000215794 MARCH8Q5T0T0 291 aa19.22■□□□□ 0.67
USP18-201ENST00000215794 FOXR1Q6PIV2 292 aa19.22■□□□□ 0.67
USP18-201ENST00000215794 ANKS1BQ7Z6G8 1248 aa19.22■□□□□ 0.67
USP18-201ENST00000215794 WDTC1Q8N5D0 677 aa19.22■□□□□ 0.67
USP18-201ENST00000215794 C1orf127Q8N9H9 656 aa19.22■□□□□ 0.67
USP18-201ENST00000215794 IPO4Q8TEX9 1081 aaKnown RBP19.22■□□□□ 0.67
USP18-201ENST00000215794 ATP6V1G3Q96LB4 118 aa19.22■□□□□ 0.67
USP18-201ENST00000215794 DEFB118Q96PH6 123 aa19.22■□□□□ 0.67
USP18-201ENST00000215794 HEMGNQ9BXL5 484 aa19.22■□□□□ 0.67
USP18-201ENST00000215794 CENPHQ9H3R5 247 aa19.22■□□□□ 0.67
USP18-201ENST00000215794 TMBIM4Q9HC24 238 aa19.22■□□□□ 0.67
USP18-201ENST00000215794 PPFIA2O75334 1257 aa19.21■□□□□ 0.67
USP18-201ENST00000215794 SSR1P43307 286 aaKnown RBP19.21■□□□□ 0.67
USP18-201ENST00000215794 CDH8P55286 799 aa19.21■□□□□ 0.67
USP18-201ENST00000215794 UBAP2Q5T6F2 1119 aaKnown RBP19.21■□□□□ 0.67
USP18-201ENST00000215794 JADE1Q6IE81 842 aa19.21■□□□□ 0.67
USP18-201ENST00000215794 CTU1Q7Z7A3 348 aaKnown RBP19.21■□□□□ 0.67
USP18-201ENST00000215794 KLHDC9Q8NEP7 349 aa19.21■□□□□ 0.67
USP18-201ENST00000215794 FEZF2Q8TBJ5 459 aa19.21■□□□□ 0.67
USP18-201ENST00000215794 RNF208Q9H0X6 261 aa19.21■□□□□ 0.67
USP18-201ENST00000215794 LRRC19Q9H756 370 aa19.21■□□□□ 0.67
USP18-201ENST00000215794 KLHL11Q9NVR0 708 aa19.21■□□□□ 0.67
USP18-201ENST00000215794 TMEM51Q9NW97 253 aa19.21■□□□□ 0.67
USP18-201ENST00000215794 SCINQ9Y6U3 715 aa19.21■□□□□ 0.67
USP18-201ENST00000215794 ARF4P18085 180 aaPredicted RBP19.21■□□□□ 0.67
USP18-201ENST00000215794 FNTAP49354 379 aa19.21■□□□□ 0.67
USP18-201ENST00000215794 CTCFP49711 727 aaPredicted RBP19.21■□□□□ 0.67
USP18-201ENST00000215794 DRG2P55039 364 aaKnown RBP19.21■□□□□ 0.67
USP18-201ENST00000215794 ZNF252P-AS1Q0IIN9 211 aa19.21■□□□□ 0.67
USP18-201ENST00000215794 MTMR3Q13615 1198 aa19.21■□□□□ 0.67
USP18-201ENST00000215794 CCSAPQ6IQ19 270 aaPredicted RBP19.21■□□□□ 0.67
USP18-201ENST00000215794 MTHFD1LQ6UB35 978 aa19.21■□□□□ 0.67
USP18-201ENST00000215794 CCDC50Q8IVM0 306 aa19.21■□□□□ 0.67
USP18-201ENST00000215794 PLVAPQ9BX97 442 aa19.21■□□□□ 0.67
USP18-201ENST00000215794 CAPS2Q9BXY5 557 aa19.21■□□□□ 0.67
USP18-201ENST00000215794 SDCBP2Q9H190 292 aa19.21■□□□□ 0.67
USP18-201ENST00000215794 PARVAQ9NVD7 372 aa19.21■□□□□ 0.67
USP18-201ENST00000215794 R3HDM2Q9Y2K5 976 aaKnown RBP19.21■□□□□ 0.67
USP18-201ENST00000215794 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.21■□□□□ 0.67
USP18-201ENST00000215794 PODXLO00592 558 aa19.2■□□□□ 0.66
USP18-201ENST00000215794 ITGB3P05106 788 aa19.2■□□□□ 0.66
USP18-201ENST00000215794 RALAP11233 206 aa19.2■□□□□ 0.66
USP18-201ENST00000215794 CCL5P13501 91 aa19.2■□□□□ 0.66
USP18-201ENST00000215794 CYP4A22Q5TCH4 519 aa19.2■□□□□ 0.66
USP18-201ENST00000215794 RHOT1Q8IXI2 618 aa19.2■□□□□ 0.66
USP18-201ENST00000215794 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.2■□□□□ 0.66
USP18-201ENST00000215794 MCEEQ96PE7 176 aa19.2■□□□□ 0.66
USP18-201ENST00000215794 FAM118BQ9BPY3 351 aa19.2■□□□□ 0.66
USP18-201ENST00000215794 EPB41L4BQ9H329 900 aa19.2■□□□□ 0.66
USP18-201ENST00000215794 TCRBV5S1A1TA0A578 114 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 HAS3O00219 553 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 MAGEB2O15479 319 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 IL18RAPO95256 599 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 ECEL1O95672 775 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 IRAK1P51617 712 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 OGDHQ02218 1023 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 TMEM62Q0P6H9 643 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 FAM187BQ17R55 369 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 NBPF20Q3BBV1 942 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 WDR72Q3MJ13 1102 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 ATP13A4Q4VNC1 1196 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 FAM47CQ5HY64 1035 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 DENND1BQ6P3S1 775 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 NLRP7Q8WX94 980 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 MTG1Q9BT17 334 aaPredicted RBP19.19■□□□□ 0.66
USP18-201ENST00000215794 RABEP2Q9H5N1 569 aa19.19■□□□□ 0.66
USP18-201ENST00000215794 TJP2Q9UDY2 1190 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms