RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP4	YDR354W	ECM31	P38122	312 aa		3.13	□□□□□ -1.91
TRP4	YDR354W	YPC1	P38298	316 aa		3.13	□□□□□ -1.91
TRP4	YDR354W	LSM4	P40070	187 aa	Known RBP	3.13	□□□□□ -1.91
TRP4	YDR354W	MRPL49	P40858	161 aa	Predicted RBP	3.13	□□□□□ -1.91
TRP4	YDR354W	MOB2	P43563	287 aa		3.13	□□□□□ -1.91
TRP4	YDR354W	UBC12	P52491	188 aa		3.13	□□□□□ -1.91
TRP4	YDR354W	FMP48	P53233	369 aa		3.13	□□□□□ -1.91
TRP4	YDR354W	YMR166C	Q03829	368 aa		3.13	□□□□□ -1.91
TRP4	YDR354W	RAV2	Q03956	351 aa		3.13	□□□□□ -1.91
TRP4	YDR354W	HNT1	Q04344	158 aa	Known RBP	3.13	□□□□□ -1.91
TRP4	YDR354W	SDH7	Q04401	133 aa		3.13	□□□□□ -1.91
TRP4	YDR354W	RDL2	Q08742	149 aa	Known RBP	3.13	□□□□□ -1.91
TRP4	YDR354W	ATG41	Q12048	136 aa		3.13	□□□□□ -1.91
TRP4	YDR354W	YGL194C-A	Q2V2P6	80 aa		3.13	□□□□□ -1.91
TRP4	YDR354W	YHR213W-A	Q8TGT4	77 aa		3.13	□□□□□ -1.91
TRP4	YDR354W	SPS2	P08459	502 aa		3.12	□□□□□ -1.91
TRP4	YDR354W	PET9	P18239	318 aa	Known RBP	3.12	□□□□□ -1.91
TRP4	YDR354W	RPS1B	P23248	255 aa	Known RBP	3.12	□□□□□ -1.91
TRP4	YDR354W	CNB1	P25296	175 aa		3.12	□□□□□ -1.91
TRP4	YDR354W	OCH1	P31755	480 aa		3.12	□□□□□ -1.91
TRP4	YDR354W	GSP1	P32835	219 aa	Known RBP	3.12	□□□□□ -1.91
TRP4	YDR354W	GSP2	P32836	220 aa	Known RBP	3.12	□□□□□ -1.91
TRP4	YDR354W	YKR041W	P36134	250 aa		3.12	□□□□□ -1.91
TRP4	YDR354W	PRS3	P38689	320 aa	Known RBP	3.12	□□□□□ -1.91
TRP4	YDR354W	HPA3	P39979	161 aa		3.12	□□□□□ -1.91
TRP4	YDR354W	BXI1	P48558	297 aa		3.12	□□□□□ -1.91
TRP4	YDR354W	RPS12	P48589	143 aa	Known RBP	3.12	□□□□□ -1.91
TRP4	YDR354W	EMC4	P53073	190 aa		3.12	□□□□□ -1.91
TRP4	YDR354W	UBC7	Q02159	165 aa		3.12	□□□□□ -1.91
TRP4	YDR354W	SCS7	Q03529	384 aa		3.12	□□□□□ -1.91
TRP4	YDR354W	YDR249C	Q03787	373 aa		3.12	□□□□□ -1.91
TRP4	YDR354W	AIM36	Q03798	255 aa		3.12	□□□□□ -1.91
TRP4	YDR354W	DPP1	Q05521	289 aa		3.12	□□□□□ -1.91
TRP4	YDR354W	RNH202	Q05635	350 aa		3.12	□□□□□ -1.91
TRP4	YDR354W	SEI1	Q06058	285 aa		3.12	□□□□□ -1.91
TRP4	YDR354W	TAZ1	Q06510	381 aa		3.12	□□□□□ -1.91
TRP4	YDR354W	YPR195C	Q06594	109 aa		3.12	□□□□□ -1.91
TRP4	YDR354W	SYC1	Q08553	188 aa	Predicted RBP	3.12	□□□□□ -1.91
TRP4	YDR354W	YPR011C	Q12251	326 aa		3.12	□□□□□ -1.91
TRP4	YDR354W	YOR304C-A	O14468	76 aa		3.11	□□□□□ -1.91
TRP4	YDR354W	FCY2	P17064	533 aa		3.11	□□□□□ -1.91
TRP4	YDR354W	YCR023C	P25351	611 aa		3.11	□□□□□ -1.91
TRP4	YDR354W	SFC1	P33303	322 aa		3.11	□□□□□ -1.91
TRP4	YDR354W	KTI12	P34253	313 aa	Known RBP	3.11	□□□□□ -1.91
TRP4	YDR354W	FRM2	P37261	193 aa		3.11	□□□□□ -1.91
TRP4	YDR354W	YBR096W	P38256	230 aa		3.11	□□□□□ -1.91
TRP4	YDR354W	HTD2	P38790	280 aa	Known RBP	3.11	□□□□□ -1.91
TRP4	YDR354W	GLE2	P40066	365 aa		3.11	□□□□□ -1.91
TRP4	YDR354W	CWC27	Q02770	301 aa		3.11	□□□□□ -1.91
TRP4	YDR354W	UTP15	Q04305	513 aa	Known RBP	3.11	□□□□□ -1.91
TRP4	YDR354W	YPL257W	Q08974	193 aa		3.11	□□□□□ -1.91
TRP4	YDR354W	YAL067W-A	Q8TGK6	75 aa		3.11	□□□□□ -1.91
TRP4	YDR354W	FAS1	P07149	2051 aa	Known RBP	3.11	□□□□□ -1.91
TRP4	YDR354W	YAL064W-B	O13512	126 aa		3.1	□□□□□ -1.91
TRP4	YDR354W	MRS1	P07266	363 aa		3.1	□□□□□ -1.91
TRP4	YDR354W	PRE7	P23724	241 aa	Known RBP	3.1	□□□□□ -1.91
TRP4	YDR354W	SCO1	P23833	295 aa		3.1	□□□□□ -1.91
TRP4	YDR354W	TMA19	P35691	167 aa	Known RBP	3.1	□□□□□ -1.91
TRP4	YDR354W	SRY1	P36007	326 aa		3.1	□□□□□ -1.91
TRP4	YDR354W	MRPL24	P36525	258 aa	Predicted RBP	3.1	□□□□□ -1.91
TRP4	YDR354W	MRPL39	P36533	70 aa		3.1	□□□□□ -1.91
TRP4	YDR354W	TRM7	P38238	310 aa	Known RBP	3.1	□□□□□ -1.91
TRP4	YDR354W	ECM14	P38836	430 aa		3.1	□□□□□ -1.91
TRP4	YDR354W	RPE1	P46969	238 aa		3.1	□□□□□ -1.91
TRP4	YDR354W	GPI14	P47088	403 aa	Known RBP	3.1	□□□□□ -1.91
TRP4	YDR354W	MDM34	P53083	459 aa		3.1	□□□□□ -1.91
TRP4	YDR354W	YMR252C	Q04814	134 aa		3.1	□□□□□ -1.91
TRP4	YDR354W	YPR114W	Q06107	315 aa		3.1	□□□□□ -1.91
TRP4	YDR354W	PEX30	Q06169	523 aa		3.1	□□□□□ -1.91
TRP4	YDR354W	PRP11	Q07350	266 aa	Predicted RBP	3.1	□□□□□ -1.91
TRP4	YDR354W	COQ10	Q08058	207 aa		3.1	□□□□□ -1.91
TRP4	YDR354W	RRP40	Q08285	240 aa	Known RBP	3.1	□□□□□ -1.91
TRP4	YDR354W	IPP1	P00817	287 aa	Known RBP	3.09	□□□□□ -1.91
TRP4	YDR354W	SPS100	P13130	326 aa		3.09	□□□□□ -1.91
TRP4	YDR354W	YCR101C	P25607	182 aa		3.09	□□□□□ -1.91
TRP4	YDR354W	GGC1	P38988	300 aa		3.09	□□□□□ -1.91
TRP4	YDR354W	BLM10	P43583	2143 aa		3.09	□□□□□ -1.91
TRP4	YDR354W	HST4	P53688	370 aa		3.09	□□□□□ -1.91
TRP4	YDR354W	SWS2	P53937	143 aa		3.09	□□□□□ -1.91
TRP4	YDR354W	FEX1	Q08913	375 aa		3.09	□□□□□ -1.91
TRP4	YDR354W	FRE8	Q12209	686 aa		3.09	□□□□□ -1.91
TRP4	YDR354W	FYV7	Q12247	151 aa		3.09	□□□□□ -1.91
TRP4	YDR354W	PSF1	Q12488	208 aa		3.09	□□□□□ -1.91
TRP4	YDR354W	PRM4	Q12498	284 aa		3.09	□□□□□ -1.91
TRP4	YDR354W	YDR524C-B	Q3E6R4	66 aa		3.09	□□□□□ -1.91
TRP4	YDR354W	YIR021W-A	Q3E739	70 aa		3.09	□□□□□ -1.91
TRP4	YDR354W	YLR099W-A	Q3E798	87 aa		3.09	□□□□□ -1.91
TRP4	YDR354W	MSB2	P32334	1306 aa		3.09	□□□□□ -1.91
TRP4	YDR354W	SAL1	D6W196	494 aa		3.08	□□□□□ -1.92
TRP4	YDR354W	ERD2	P18414	219 aa		3.08	□□□□□ -1.92
TRP4	YDR354W	EMP24	P32803	203 aa	Known RBP	3.08	□□□□□ -1.92
TRP4	YDR354W	SUI1	P32911	108 aa	Known RBP	3.08	□□□□□ -1.92
TRP4	YDR354W	YBR063C	P38083	404 aa		3.08	□□□□□ -1.92
TRP4	YDR354W	AIM2	P39721	246 aa		3.08	□□□□□ -1.92
TRP4	YDR354W	PAC10	P48363	199 aa		3.08	□□□□□ -1.92
TRP4	YDR354W	SAE3	P89114	91 aa		3.08	□□□□□ -1.92
TRP4	YDR354W	GMC1	Q04399	608 aa		3.08	□□□□□ -1.92
TRP4	YDR354W	API2	Q04413	109 aa		3.08	□□□□□ -1.92
TRP4	YDR354W	SPG4	Q04438	115 aa		3.08	□□□□□ -1.92
TRP4	YDR354W	YOL029C	Q08187	201 aa		3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 59.2 ms