RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C RIO2P40160 425 aaKnown RBP1.82□□□□□ -2.12
RRI1YDL216C RAD28Q12021 506 aa1.82□□□□□ -2.12
RRI1YDL216C ODC2Q99297 307 aa1.82□□□□□ -2.12
RRI1YDL216C CYR1P08678 2026 aaKnown RBP1.81□□□□□ -2.12
RRI1YDL216C RFA3P26755 122 aaKnown RBP1.81□□□□□ -2.12
RRI1YDL216C NTG1P31378 399 aa1.81□□□□□ -2.12
RRI1YDL216C YER034WP40022 185 aaKnown RBP1.81□□□□□ -2.12
RRI1YDL216C YOL160WQ08321 113 aa1.81□□□□□ -2.12
RRI1YDL216C GIS3Q12418 502 aa1.81□□□□□ -2.12
RRI1YDL216C VAR1P02381 398 aa1.8□□□□□ -2.12
RRI1YDL216C RPB4P20433 221 aaPredicted RBP1.8□□□□□ -2.12
RRI1YDL216C YMR226CQ05016 267 aaKnown RBP1.8□□□□□ -2.12
RRI1YDL216C YHR007C-AQ07074 71 aa1.8□□□□□ -2.12
RRI1YDL216C ROM2P51862 1356 aaKnown RBP1.79□□□□□ -2.12
RRI1YDL216C TAO3P40468 2376 aa1.79□□□□□ -2.12
RRI1YDL216C HTB1P02293 131 aaKnown RBP1.79□□□□□ -2.12
RRI1YDL216C HTB2P02294 131 aa1.79□□□□□ -2.12
RRI1YDL216C VMA22P38784 181 aa1.79□□□□□ -2.12
RRI1YDL216C AIM25P47140 327 aa1.79□□□□□ -2.12
RRI1YDL216C TIM11P81449 96 aaPredicted RBP1.79□□□□□ -2.12
RRI1YDL216C PMD1P32634 1753 aa1.78□□□□□ -2.12
RRI1YDL216C YCR090CP25654 182 aaKnown RBP1.78□□□□□ -2.12
RRI1YDL216C OCH1P31755 480 aa1.78□□□□□ -2.12
RRI1YDL216C ECM4P36156 370 aa1.78□□□□□ -2.12
RRI1YDL216C ERG10P41338 398 aaKnown RBP1.78□□□□□ -2.12
RRI1YDL216C RCE1Q03530 315 aa1.78□□□□□ -2.12
RRI1YDL216C FUS2Q05670 677 aa1.78□□□□□ -2.12
RRI1YDL216C GGA1Q06336 557 aa1.78□□□□□ -2.12
RRI1YDL216C TOR2P32600 2474 aaKnown RBP1.78□□□□□ -2.12
RRI1YDL216C SPO13P23624 291 aa1.77□□□□□ -2.13
RRI1YDL216C FLX1P40464 311 aa1.77□□□□□ -2.13
RRI1YDL216C YAE1P47118 141 aaPredicted RBP1.77□□□□□ -2.13
RRI1YDL216C UTP10P42945 1769 aaKnown RBP1.76□□□□□ -2.13
RRI1YDL216C CNB1P25296 175 aa1.76□□□□□ -2.13
RRI1YDL216C EDC3P39998 551 aaKnown RBP1.76□□□□□ -2.13
RRI1YDL216C ARO8P53090 500 aaKnown RBP1.76□□□□□ -2.13
RRI1YDL216C GET1P53192 235 aa1.76□□□□□ -2.13
RRI1YDL216C MPC3P53311 146 aa1.76□□□□□ -2.13
RRI1YDL216C DGA1Q08650 418 aa1.76□□□□□ -2.13
RRI1YDL216C YRA1Q12159 226 aaKnown RBP1.76□□□□□ -2.13
RRI1YDL216C GSC2P40989 1895 aa1.76□□□□□ -2.13
RRI1YDL216C RAD9P14737 1309 aa1.76□□□□□ -2.13
RRI1YDL216C CDC36P06100 191 aaPredicted RBP1.75□□□□□ -2.13
RRI1YDL216C PAN3P36102 679 aaPredicted RBP1.75□□□□□ -2.13
RRI1YDL216C TVP23P38962 199 aa1.75□□□□□ -2.13
RRI1YDL216C AIM2P39721 246 aa1.75□□□□□ -2.13
RRI1YDL216C MRPS17Q03246 237 aaPredicted RBP1.75□□□□□ -2.13
RRI1YDL216C DYN3Q04949 312 aa1.75□□□□□ -2.13
RRI1YDL216C YPR174CQ06616 221 aaPredicted RBP1.75□□□□□ -2.13
RRI1YDL216C POR1P04840 283 aaKnown RBP1.74□□□□□ -2.13
RRI1YDL216C RFC4P40339 323 aaKnown RBP1.74□□□□□ -2.13
RRI1YDL216C CWC27Q02770 301 aa1.74□□□□□ -2.13
RRI1YDL216C MDM35O60200 86 aa1.73□□□□□ -2.13
RRI1YDL216C ASF2P32448 525 aaPredicted RBP1.73□□□□□ -2.13
RRI1YDL216C YEA4P40004 342 aa1.73□□□□□ -2.13
RRI1YDL216C SKI6P46948 246 aaPredicted RBP1.73□□□□□ -2.13
RRI1YDL216C MBF1O14467 151 aaKnown RBP1.72□□□□□ -2.13
RRI1YDL216C CBF1P17106 351 aa1.72□□□□□ -2.13
RRI1YDL216C YPK2P18961 677 aa1.72□□□□□ -2.13
RRI1YDL216C YKT6P36015 200 aaKnown RBP1.72□□□□□ -2.13
RRI1YDL216C YER134CP40081 178 aa1.72□□□□□ -2.13
RRI1YDL216C YPL073CP40323 161 aa1.72□□□□□ -2.13
RRI1YDL216C MMS2P53152 137 aa1.72□□□□□ -2.13
RRI1YDL216C YNL247WP53852 767 aaKnown RBP1.72□□□□□ -2.13
RRI1YDL216C TEL1P38110 2787 aa1.72□□□□□ -2.13
RRI1YDL216C MRS1P07266 363 aa1.71□□□□□ -2.14
RRI1YDL216C YHL042WP38729 150 aa1.71□□□□□ -2.14
RRI1YDL216C SER2P42941 309 aa1.71□□□□□ -2.14
RRI1YDL216C YDR034W-BQ6Q5X2 51 aa1.71□□□□□ -2.14
RRI1YDL216C HKR1P41809 1802 aa1.71□□□□□ -2.14
RRI1YDL216C MATALPHA2P0CY08 210 aa1.7□□□□□ -2.14
RRI1YDL216C HMLALPHA2P0CY09 210 aa1.7□□□□□ -2.14
RRI1YDL216C CWC21Q03375 135 aaKnown RBP1.7□□□□□ -2.14
RRI1YDL216C ABP140Q08641 628 aaKnown RBP1.7□□□□□ -2.14
RRI1YDL216C YCL012CQ8J0M4 134 aa1.7□□□□□ -2.14
RRI1YDL216C GCN1P33892 2672 aaKnown RBP1.7□□□□□ -2.14
RRI1YDL216C IRA1P18963 3092 aa1.7□□□□□ -2.14
RRI1YDL216C YAR023CD6VPM8 179 aa1.69□□□□□ -2.14
RRI1YDL216C YEL067CP39978 195 aa1.69□□□□□ -2.14
RRI1YDL216C HYR1P40581 163 aaKnown RBP1.69□□□□□ -2.14
RRI1YDL216C ARP3P47117 449 aaKnown RBP1.69□□□□□ -2.14
RRI1YDL216C CGR1P53188 120 aa1.69□□□□□ -2.14
RRI1YDL216C YMR295CQ03559 197 aa1.69□□□□□ -2.14
RRI1YDL216C GET4Q12125 312 aa1.69□□□□□ -2.14
RRI1YDL216C SOK1P40317 901 aa1.68□□□□□ -2.14
RRI1YDL216C YFL065CP43539 102 aa1.68□□□□□ -2.14
RRI1YDL216C YMR007WQ03675 126 aa1.68□□□□□ -2.14
RRI1YDL216C YLR031WQ07978 186 aa1.68□□□□□ -2.14
RRI1YDL216C AQY2P0CD90 149 aa1.67□□□□□ -2.14
RRI1YDL216C DAD4P69851 72 aa1.67□□□□□ -2.14
RRI1YDL216C YLR036CQ07986 203 aa1.67□□□□□ -2.14
RRI1YDL216C IRC23Q08416 157 aa1.67□□□□□ -2.14
RRI1YDL216C YLR419WQ06698 1435 aaKnown RBP1.67□□□□□ -2.14
RRI1YDL216C UTP20P35194 2493 aaKnown RBP1.67□□□□□ -2.14
RRI1YDL216C FLO1P32768 1537 aa1.67□□□□□ -2.14
RRI1YDL216C JIP3O13555 125 aa1.66□□□□□ -2.14
RRI1YDL216C QCR7P00128 127 aa1.66□□□□□ -2.14
RRI1YDL216C MTW1P39731 289 aa1.66□□□□□ -2.14
RRI1YDL216C YFH7P43591 353 aa1.66□□□□□ -2.14
RRI1YDL216C UBC12P52491 188 aa1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 72.3 ms