RNA–Protein interactions for RNA: YDL156W

CMR1, Transcript of DNA-binding protein with preference for UV-damaged DNA, yeast

Gene CMR1, Length 1,569 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR1	YDL156W	FIS1	P40515	155 aa		4.91	□□□□□ -1.62
CMR1	YDL156W	GPI2	P46961	280 aa		4.91	□□□□□ -1.62
CMR1	YDL156W	PGU1	P47180	361 aa		4.91	□□□□□ -1.62
CMR1	YDL156W	AIM11	P87275	137 aa		4.91	□□□□□ -1.62
CMR1	YDL156W	YMR099C	Q03161	297 aa	Known RBP	4.91	□□□□□ -1.62
CMR1	YDL156W	SPC3	Q12133	184 aa		4.91	□□□□□ -1.62
CMR1	YDL156W	YLR118C	Q12354	227 aa		4.91	□□□□□ -1.62
CMR1	YDL156W	YPL247C	Q12523	523 aa		4.91	□□□□□ -1.62
CMR1	YDL156W	BOL1	Q3E793	110 aa		4.91	□□□□□ -1.62
CMR1	YDL156W	YEL009C-A	A0A023PZF2	135 aa		4.9	□□□□□ -1.63
CMR1	YDL156W	CBP6	P07253	162 aa	Predicted RBP	4.9	□□□□□ -1.63
CMR1	YDL156W	YLR156W	P0CE96	114 aa		4.9	□□□□□ -1.63
CMR1	YDL156W	YLR159W	P0CE97	114 aa		4.9	□□□□□ -1.63
CMR1	YDL156W	YLR161W	P0CE98	114 aa		4.9	□□□□□ -1.63
CMR1	YDL156W	REE1	P40893	198 aa		4.9	□□□□□ -1.63
CMR1	YDL156W	AIF1	P52923	378 aa		4.9	□□□□□ -1.63
CMR1	YDL156W	AIM36	Q03798	255 aa		4.9	□□□□□ -1.63
CMR1	YDL156W	MET5	P47169	1442 aa		4.9	□□□□□ -1.63
CMR1	YDL156W	RNP1	P32385	249 aa		4.89	□□□□□ -1.63
CMR1	YDL156W	YBL081W	P38180	368 aa	Known RBP	4.89	□□□□□ -1.63
CMR1	YDL156W	YHL026C	P38740	315 aa		4.89	□□□□□ -1.63
CMR1	YDL156W	PRE5	P40302	234 aa	Known RBP	4.89	□□□□□ -1.63
CMR1	YDL156W	IGD1	P43598	195 aa		4.89	□□□□□ -1.63
CMR1	YDL156W	RPS12	P48589	143 aa	Known RBP	4.89	□□□□□ -1.63
CMR1	YDL156W	YNL033W	P53964	284 aa		4.89	□□□□□ -1.63
CMR1	YDL156W	YNL019C	P53975	284 aa		4.89	□□□□□ -1.63
CMR1	YDL156W	MCH1	Q07376	486 aa		4.89	□□□□□ -1.63
CMR1	YDL156W	YDL211C	Q12121	372 aa		4.89	□□□□□ -1.63
CMR1	YDL156W	YML100W-A	Q8TGT0	57 aa		4.89	□□□□□ -1.63
CMR1	YDL156W	GDB1	Q06625	1536 aa		4.89	□□□□□ -1.63
CMR1	YDL156W	ADK1	P07170	222 aa	Known RBP	4.88	□□□□□ -1.63
CMR1	YDL156W	YCR043C	P25361	127 aa		4.88	□□□□□ -1.63
CMR1	YDL156W	SHB17	P36136	271 aa	Known RBP	4.88	□□□□□ -1.63
CMR1	YDL156W	ECM19	Q06011	112 aa		4.88	□□□□□ -1.63
CMR1	YDL156W	YOL014W	Q08110	124 aa		4.88	□□□□□ -1.63
CMR1	YDL156W	FCF2	Q12035	217 aa	Predicted RBP	4.88	□□□□□ -1.63
CMR1	YDL156W	ISD11	Q6Q560	94 aa		4.88	□□□□□ -1.63
CMR1	YDL156W	ROM2	P51862	1356 aa	Known RBP	4.88	□□□□□ -1.63
CMR1	YDL156W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.88	□□□□□ -1.63
CMR1	YDL156W	REP2	P03872	296 aa		4.87	□□□□□ -1.63
CMR1	YDL156W	YBL010C	P32788	280 aa		4.87	□□□□□ -1.63
CMR1	YDL156W	ASK1	P35734	292 aa		4.87	□□□□□ -1.63
CMR1	YDL156W	TRS20	P38334	175 aa		4.87	□□□□□ -1.63
CMR1	YDL156W	YFL019C	P43576	117 aa		4.87	□□□□□ -1.63
CMR1	YDL156W	APJ1	P53940	528 aa		4.87	□□□□□ -1.63
CMR1	YDL156W	OSH6	Q02201	448 aa		4.87	□□□□□ -1.63
CMR1	YDL156W	YDR391C	Q04170	232 aa		4.87	□□□□□ -1.63
CMR1	YDL156W	YOL029C	Q08187	201 aa		4.87	□□□□□ -1.63
CMR1	YDL156W	YKL068W-A	Q3E826	78 aa		4.87	□□□□□ -1.63
CMR1	YDL156W	TAD3	Q9URQ3	322 aa		4.87	□□□□□ -1.63
CMR1	YDL156W	ARO2	P28777	376 aa	Known RBP	4.87	□□□□□ -1.63
CMR1	YDL156W	VMA11	P32842	164 aa		4.87	□□□□□ -1.63
CMR1	YDL156W	MIG3	P39943	394 aa		4.87	□□□□□ -1.63
CMR1	YDL156W	YER134C	P40081	178 aa		4.87	□□□□□ -1.63
CMR1	YDL156W	YNL200C	P40165	246 aa	Known RBP	4.87	□□□□□ -1.63
CMR1	YDL156W	VPS28	Q02767	242 aa		4.87	□□□□□ -1.63
CMR1	YDL156W	SPG3	Q04398	127 aa	Predicted RBP	4.87	□□□□□ -1.63
CMR1	YDL156W	ATG39	Q06159	398 aa		4.87	□□□□□ -1.63
CMR1	YDL156W	ESC1	Q03661	1658 aa	Known RBP	4.86	□□□□□ -1.63
CMR1	YDL156W	ATP15	P21306	62 aa		4.86	□□□□□ -1.63
CMR1	YDL156W	SPT14	P32363	452 aa		4.86	□□□□□ -1.63
CMR1	YDL156W	YBL059W	P34224	193 aa		4.86	□□□□□ -1.63
CMR1	YDL156W	RCN1	P36054	211 aa		4.86	□□□□□ -1.63
CMR1	YDL156W	YBR220C	P38318	560 aa		4.86	□□□□□ -1.63
CMR1	YDL156W	YHR140W	P38842	239 aa		4.86	□□□□□ -1.63
CMR1	YDL156W	SFT1	P43682	97 aa		4.86	□□□□□ -1.63
CMR1	YDL156W	RTR2	Q12378	196 aa		4.86	□□□□□ -1.63
CMR1	YDL156W	TY3B-G	Q99315	1547 aa		4.85	□□□□□ -1.63
CMR1	YDL156W	FMP46	P36141	133 aa	Known RBP	4.85	□□□□□ -1.63
CMR1	YDL156W	GPI18	P38211	433 aa		4.85	□□□□□ -1.63
CMR1	YDL156W	YPT31	P38555	223 aa	Known RBP	4.85	□□□□□ -1.63
CMR1	YDL156W	PAC10	P48363	199 aa		4.85	□□□□□ -1.63
CMR1	YDL156W	YGL193C	P53097	103 aa		4.85	□□□□□ -1.63
CMR1	YDL156W	FSF1	Q12029	327 aa	Known RBP	4.85	□□□□□ -1.63
CMR1	YDL156W	HYR1	P40581	163 aa	Known RBP	4.84	□□□□□ -1.63
CMR1	YDL156W	NAT3	Q06504	195 aa		4.84	□□□□□ -1.63
CMR1	YDL156W	SPT15	P13393	240 aa	Known RBP	4.83	□□□□□ -1.64
CMR1	YDL156W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
CMR1	YDL156W	GVP36	P40531	326 aa	Known RBP	4.83	□□□□□ -1.64
CMR1	YDL156W	RSM27	P53305	110 aa		4.83	□□□□□ -1.64
CMR1	YDL156W	SGA1	P08019	549 aa		4.82	□□□□□ -1.64
CMR1	YDL156W	RPB9	P27999	122 aa		4.82	□□□□□ -1.64
CMR1	YDL156W	RPL14A	P36105	138 aa	Known RBP	4.82	□□□□□ -1.64
CMR1	YDL156W	RPL14B	P38754	138 aa	Known RBP	4.82	□□□□□ -1.64
CMR1	YDL156W	CAX4	P53223	239 aa		4.82	□□□□□ -1.64
CMR1	YDL156W	SCW10	Q04951	389 aa		4.82	□□□□□ -1.64
CMR1	YDL156W	RPL9A	P05738	191 aa	Known RBP	4.82	□□□□□ -1.64
CMR1	YDL156W	CPA1	P07258	411 aa	Known RBP	4.82	□□□□□ -1.64
CMR1	YDL156W	RRT13	P40042	185 aa		4.82	□□□□□ -1.64
CMR1	YDL156W	VTC1	P40046	129 aa	RIP-Chip data	4.82	□□□□□ -1.64	not detected
CMR1	YDL156W	YJL218W	P40892	196 aa	Known RBP	4.82	□□□□□ -1.64
CMR1	YDL156W	RPL9B	P51401	191 aa	Known RBP	4.82	□□□□□ -1.64
CMR1	YDL156W	SCW4	P53334	386 aa	Known RBP	4.82	□□□□□ -1.64
CMR1	YDL156W	PPT2	Q12036	173 aa		4.82	□□□□□ -1.64
CMR1	YDL156W	ULS1	Q08562	1619 aa		4.81	□□□□□ -1.64
CMR1	YDL156W	CAT8	P39113	1433 aa		4.81	□□□□□ -1.64
CMR1	YDL156W	YAR023C	D6VPM8	179 aa		4.81	□□□□□ -1.64
CMR1	YDL156W	HIS3	P06633	220 aa		4.81	□□□□□ -1.64
CMR1	YDL156W	SPS2	P08459	502 aa		4.81	□□□□□ -1.64
CMR1	YDL156W	FYV4	P38783	130 aa	Predicted RBP	4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms