RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W YPR098CQ06089 161 aa3.1□□□□□ -1.91
TSR1YDL060W NAT3Q06504 195 aa3.1□□□□□ -1.91
TSR1YDL060W SEC59P20048 519 aa3.09□□□□□ -1.91
TSR1YDL060W SUA7P29055 345 aaPredicted RBP3.09□□□□□ -1.91
TSR1YDL060W ERG24P32462 438 aaKnown RBP3.09□□□□□ -1.91
TSR1YDL060W YKL075CP36083 450 aa3.09□□□□□ -1.91
TSR1YDL060W SRP14P38985 146 aa3.09□□□□□ -1.91
TSR1YDL060W YIL029CP40538 142 aa3.09□□□□□ -1.91
TSR1YDL060W ERG25P53045 309 aa3.09□□□□□ -1.91
TSR1YDL060W ACT1P60010 375 aaKnown RBP3.09□□□□□ -1.91
TSR1YDL060W UTP15Q04305 513 aaKnown RBP3.09□□□□□ -1.91
TSR1YDL060W LOA1Q06508 300 aa3.09□□□□□ -1.91
TSR1YDL060W HEM25Q07534 307 aa3.09□□□□□ -1.91
TSR1YDL060W PST1Q12355 444 aa3.09□□□□□ -1.91
TSR1YDL060W WIP1Q2V2P8 89 aa3.09□□□□□ -1.91
TSR1YDL060W CYC3P06182 269 aa3.09□□□□□ -1.92
TSR1YDL060W TRS65P32893 560 aa3.09□□□□□ -1.92
TSR1YDL060W UPS2P35200 230 aa3.09□□□□□ -1.92
TSR1YDL060W PMU1P36069 295 aa3.09□□□□□ -1.92
TSR1YDL060W CCC1P47818 322 aa3.09□□□□□ -1.92
TSR1YDL060W YNL140CP53910 189 aa3.09□□□□□ -1.92
TSR1YDL060W YOR015WQ12169 119 aa3.09□□□□□ -1.92
TSR1YDL060W YOS1Q3E834 85 aa3.09□□□□□ -1.92
TSR1YDL060W SCS22Q6Q595 175 aa3.09□□□□□ -1.92
TSR1YDL060W Q0144Q9ZZW2 109 aa3.09□□□□□ -1.92
TSR1YDL060W IRA2P19158 3079 aa3.08□□□□□ -1.92
TSR1YDL060W QCR2P07257 368 aa3.08□□□□□ -1.92
TSR1YDL060W UBI4P0CG63 381 aaKnown RBP3.08□□□□□ -1.92
TSR1YDL060W RPL40AP0CH08 128 aaKnown RBP3.08□□□□□ -1.92
TSR1YDL060W RPL40BP0CH09 128 aaKnown RBP3.08□□□□□ -1.92
TSR1YDL060W MRS3P10566 314 aa3.08□□□□□ -1.92
TSR1YDL060W RPL14AP36105 138 aaKnown RBP3.08□□□□□ -1.92
TSR1YDL060W PAU24P38155 120 aa3.08□□□□□ -1.92
TSR1YDL060W RPL14BP38754 138 aaKnown RBP3.08□□□□□ -1.92
TSR1YDL060W HEM14P40012 539 aa3.08□□□□□ -1.92
TSR1YDL060W EAF6P47128 113 aa3.08□□□□□ -1.92
TSR1YDL060W TPC1P53257 314 aa3.08□□□□□ -1.92
TSR1YDL060W YLR152CP54072 576 aa3.08□□□□□ -1.92
TSR1YDL060W SAE3P89114 91 aa3.08□□□□□ -1.92
TSR1YDL060W YMR321CQ04898 105 aa3.08□□□□□ -1.92
TSR1YDL060W AYT1Q12226 474 aa3.08□□□□□ -1.92
TSR1YDL060W MCT1Q12283 360 aa3.08□□□□□ -1.92
TSR1YDL060W PRR2Q12310 699 aa3.08□□□□□ -1.92
TSR1YDL060W FOL3Q12676 427 aaPredicted RBP3.08□□□□□ -1.92
TSR1YDL060W EFG1Q3E705 233 aaKnown RBP3.08□□□□□ -1.92
TSR1YDL060W PET20Q99373 253 aa3.08□□□□□ -1.92
TSR1YDL060W ATP5P09457 212 aa3.08□□□□□ -1.92
TSR1YDL060W MRPL20P22354 195 aaPredicted RBP3.08□□□□□ -1.92
TSR1YDL060W MRP21P38175 177 aa3.08□□□□□ -1.92
TSR1YDL060W FIG1P38224 298 aa3.08□□□□□ -1.92
TSR1YDL060W BAT1P38891 393 aaKnown RBP3.08□□□□□ -1.92
TSR1YDL060W YML096WQ04489 525 aa3.08□□□□□ -1.92
TSR1YDL060W YLR030WQ07967 263 aa3.08□□□□□ -1.92
TSR1YDL060W YPL257WQ08974 193 aa3.08□□□□□ -1.92
TSR1YDL060W COX19Q3E731 98 aa3.08□□□□□ -1.92
TSR1YDL060W YDL085C-AQ3E7B7 68 aaKnown RBP3.08□□□□□ -1.92
TSR1YDL060W YAL064W-BO13512 126 aa3.07□□□□□ -1.92
TSR1YDL060W EPT1P22140 391 aa3.07□□□□□ -1.92
TSR1YDL060W SPS18P32572 300 aa3.07□□□□□ -1.92
TSR1YDL060W YCR087C-AP37263 153 aa3.07□□□□□ -1.92
TSR1YDL060W LSM2P38203 95 aaKnown RBP3.07□□□□□ -1.92
TSR1YDL060W WSC4P38739 605 aa3.07□□□□□ -1.92
TSR1YDL060W NSA1P53136 463 aaPredicted RBP3.07□□□□□ -1.92
TSR1YDL060W MMS2P53152 137 aa3.07□□□□□ -1.92
TSR1YDL060W PGA1P53896 198 aa3.07□□□□□ -1.92
TSR1YDL060W NRK1P53915 240 aa3.07□□□□□ -1.92
TSR1YDL060W MZM1Q03429 123 aaPredicted RBP3.07□□□□□ -1.92
TSR1YDL060W SEI1Q06058 285 aa3.07□□□□□ -1.92
TSR1YDL060W HAP2P06774 265 aa3.07□□□□□ -1.92
TSR1YDL060W UTR5P32630 166 aa3.07□□□□□ -1.92
TSR1YDL060W ALK2P32789 676 aaPredicted RBP3.07□□□□□ -1.92
TSR1YDL060W SHE2P36068 246 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
TSR1YDL060W PAU15P40585 124 aa3.07□□□□□ -1.92
TSR1YDL060W NCA3P46955 337 aa3.07□□□□□ -1.92
TSR1YDL060W YJL028WP47062 111 aa3.07□□□□□ -1.92
TSR1YDL060W YLR460CP54007 376 aa3.07□□□□□ -1.92
TSR1YDL060W RCE1Q03530 315 aa3.07□□□□□ -1.92
TSR1YDL060W YML018CQ03730 393 aa3.07□□□□□ -1.92
TSR1YDL060W SPG3Q04398 127 aaPredicted RBP3.07□□□□□ -1.92
TSR1YDL060W YMR317WQ04893 1140 aa3.07□□□□□ -1.92
TSR1YDL060W COX5BP00425 151 aa3.06□□□□□ -1.92
TSR1YDL060W CSE2P33308 149 aa3.06□□□□□ -1.92
TSR1YDL060W YEL073CP39974 107 aa3.06□□□□□ -1.92
TSR1YDL060W SPC25P40014 221 aa3.06□□□□□ -1.92
TSR1YDL060W NSA2P40078 261 aaKnown RBP3.06□□□□□ -1.92
TSR1YDL060W AVT7P40501 490 aa3.06□□□□□ -1.92
TSR1YDL060W RPR2P40571 144 aa3.06□□□□□ -1.92
TSR1YDL060W BLM10P43583 2143 aa3.06□□□□□ -1.92
TSR1YDL060W MIM1Q08176 113 aa3.06□□□□□ -1.92
TSR1YDL060W TPO4Q12256 659 aa3.06□□□□□ -1.92
TSR1YDL060W SLO1Q3E784 85 aa3.06□□□□□ -1.92
TSR1YDL060W BEM2P39960 2167 aaKnown RBP3.06□□□□□ -1.92
TSR1YDL060W TRP1P00912 224 aa3.05□□□□□ -1.92
TSR1YDL060W POR1P04840 283 aaKnown RBP3.05□□□□□ -1.92
TSR1YDL060W HAP3P13434 144 aa3.05□□□□□ -1.92
TSR1YDL060W ARO2P28777 376 aaKnown RBP3.05□□□□□ -1.92
TSR1YDL060W TRR1P29509 319 aaKnown RBP3.05□□□□□ -1.92
TSR1YDL060W GPX1P36014 167 aa3.05□□□□□ -1.92
TSR1YDL060W PAN3P36102 679 aaPredicted RBP3.05□□□□□ -1.92
TSR1YDL060W YND1P40009 630 aa3.05□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms