RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 PEX3P56589 373 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 DEPDC1Q5TB30 811 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 ATXN3LQ9H3M9 355 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 PCDHA10Q9Y5I2 948 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 ZRANB2O95218 330 aaKnown RBP eCLIP6.57□□□□□ -1.36
CDKL5-205ENST00000623535 LYNP07948 512 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 PRMT2P55345 433 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 UBE3CQ15386 1083 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 TSC22D1Q15714 1073 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 ANKRD44Q8N8A2 993 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 PYROXD1Q8WU10 500 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 TESCQ96BS2 214 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 REPS1Q96D71 796 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 GPR20Q99678 358 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 NPHS2Q9NP85 383 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 SLC25A12O75746 678 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 NPTXRO95502 500 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 HSD3B2P26439 372 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 POU5F1BQ06416 359 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 ABRQ12979 859 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 PPP2R2DQ66LE6 453 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 CAPN12Q6ZSI9 719 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 CD302Q8IX05 232 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 TCEANC2Q96MN5 208 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 FTHL17Q9BXU8 183 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 POLR3FQ9H1D9 316 aaPredicted RBP6.57□□□□□ -1.36
CDKL5-205ENST00000623535 TLE6Q9H808 572 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 CYP39A1Q9NYL5 469 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 ZNF335Q9H4Z2 1342 aaPredicted RBP6.57□□□□□ -1.36
CDKL5-205ENST00000623535 POC1B-GALNT4F8VUJ3 575 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 ADH1CP00326 375 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 IFNA14P01570 189 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 CAPN2P17655 700 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 GPD2P43304 727 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 EFTUD2Q15029 972 aaKnown RBP eCLIP6.57□□□□□ -1.36
CDKL5-205ENST00000623535 UBE2TQ9NPD8 197 aaPredicted RBP6.57□□□□□ -1.36
CDKL5-205ENST00000623535 IFNKQ9P0W0 207 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 SNX9Q9Y5X1 595 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 NEO1Q92859 1461 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 ATG13O75143 517 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 HMBSP08397 361 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 MCAMP43121 646 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 SULT1E1P49888 294 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 RAD23AP54725 363 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 ZBED6P86452 979 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 USP50Q70EL3 339 aaPredicted RBP6.57□□□□□ -1.36
CDKL5-205ENST00000623535 CAND1Q86VP6 1230 aaKnown RBP6.57□□□□□ -1.36
CDKL5-205ENST00000623535 DDIASQ8IXT1 998 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 ZMAT2Q96NC0 199 aaKnown RBP6.57□□□□□ -1.36
CDKL5-205ENST00000623535 ALKBH4Q9NXW9 302 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 DDX41Q9UJV9 622 aaKnown RBP6.57□□□□□ -1.36
CDKL5-205ENST00000623535 CAB39Q9Y376 341 aaPredicted RBP6.57□□□□□ -1.36
CDKL5-205ENST00000623535 THOC7Q6I9Y2 204 aaKnown RBP6.57□□□□□ -1.36
CDKL5-205ENST00000623535 NANOGNBQ7Z5D8 188 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 WDR75Q8IWA0 830 aaKnown RBP6.57□□□□□ -1.36
CDKL5-205ENST00000623535 BCAS4Q8TDM0 211 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 LRRC39Q96DD0 335 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 ADGRE3Q9BY15 652 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 ASCC2Q9H1I8 757 aaPredicted RBP6.57□□□□□ -1.36
CDKL5-205ENST00000623535 TDRD3Q9H7E2 651 aaKnown RBP6.57□□□□□ -1.36
CDKL5-205ENST00000623535 DNPEPQ9ULA0 475 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 ASXL1Q8IXJ9 1541 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 CLTBP09497 229 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 ACADLP28330 430 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 CXorf40BQ96DE9 158 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 FHDC1Q9C0D6 1143 aaPredicted RBP6.57□□□□□ -1.36
CDKL5-205ENST00000623535 MYOZ2Q9NPC6 264 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 XPNPEP3Q9NQH7 507 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 SPG21Q9NZD8 308 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 MAP3K19Q56UN5 1328 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 ABCA10Q8WWZ4 1543 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 CIAO1O76071 339 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 GIT2Q14161 759 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 PKN2Q16513 984 aaKnown RBP6.57□□□□□ -1.36
CDKL5-205ENST00000623535 TLR8Q9NR97 1041 aaKnown RBP6.57□□□□□ -1.36
CDKL5-205ENST00000623535 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.57□□□□□ -1.36
CDKL5-205ENST00000623535 DNTTP04053 509 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 MYBL1P10243 752 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 CLUP10909 449 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 DNAJB2P25686 324 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 GRK4P32298 578 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 PTK6Q13882 451 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 SLC9A4Q6AI14 798 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 XRRA1Q6P2D8 792 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 TRPM8Q7Z2W7 1104 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 RNF135Q8IUD6 432 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 SEPT1Q8WYJ6 367 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 MXD3Q9BW11 206 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 USE1Q9NZ43 259 aa6.57□□□□□ -1.36
CDKL5-205ENST00000623535 SCAF8Q9UPN6 1271 aaKnown RBP6.57□□□□□ -1.36
CDKL5-205ENST00000623535 ERBB3P21860 1342 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 TRAV19A0A0A6YYK7 116 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.56□□□□□ -1.36
CDKL5-205ENST00000623535 H3BNH8 94 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 APOL1O14791 398 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 PRIM2P49643 509 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 MRPS33Q9Y291 106 aaKnown RBP6.56□□□□□ -1.36
CDKL5-205ENST00000623535 RBM7Q9Y580 266 aaKnown RBP6.56□□□□□ -1.36
CDKL5-205ENST00000623535 SERPINB4P48594 390 aa6.56□□□□□ -1.36
CDKL5-205ENST00000623535 TUFMP49411 452 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms