RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 ZNF677Q86XU0 584 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 ENGASEQ8NFI3 743 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 CNOT10Q9H9A5 744 aaKnown RBP11.55□□□□□ -0.56
SHANK2-219ENST00000606715 TMEM8AQ9HCN3 771 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 ITIH6Q6UXX5 1313 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 PDHXO00330 501 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 APOA4P06727 396 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 ERVK-10P10266 1014 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 CKBP12277 381 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 DARSP14868 501 aaKnown RBP11.55□□□□□ -0.56
SHANK2-219ENST00000606715 RGS4P49798 205 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 PCSK7Q16549 785 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 NBPF20Q3BBV1 942 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 Q4G0T1 1027 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 COBLL1Q53SF7 1204 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.55□□□□□ -0.56
SHANK2-219ENST00000606715 ZNF438Q7Z4V0 828 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 FBXL16Q8N461 479 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 AGPAT1Q99943 283 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 HTATIP2Q9BUP3 242 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 SPATC1LQ9H0A9 340 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 ZSCAN32Q9NX65 697 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 ARHGAP26Q9UNA1 814 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 PLA2G4CQ9UP65 541 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 TARSL2A2RTX5 802 aaKnown RBP11.55□□□□□ -0.56
SHANK2-219ENST00000606715 CARNS1A5YM72 827 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 DDTLA6NHG4 134 aaPredicted RBP11.55□□□□□ -0.56
SHANK2-219ENST00000606715 H2AFYO75367 372 aaKnown RBP11.55□□□□□ -0.56
SHANK2-219ENST00000606715 LUC7L3O95232 432 aaKnown RBP11.55□□□□□ -0.56
SHANK2-219ENST00000606715 MZF1P28698 734 aaPredicted RBP11.55□□□□□ -0.56
SHANK2-219ENST00000606715 PPIL2Q13356 520 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 TP53BP2Q13625 1128 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 BTG3Q14201 252 aaPredicted RBP11.55□□□□□ -0.56
SHANK2-219ENST00000606715 PLCL1Q15111 1095 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 HIST2H2ACQ16777 129 aaPredicted RBP11.55□□□□□ -0.56
SHANK2-219ENST00000606715 AP1ARQ63HQ0 302 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 HIST2H2AA3Q6FI13 130 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 NIPA1Q7RTP0 329 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 METTL16Q86W50 562 aaKnown RBP11.55□□□□□ -0.56
SHANK2-219ENST00000606715 BTBD6Q96KE9 485 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 FAM50BQ9Y247 325 aa11.55□□□□□ -0.56
SHANK2-219ENST00000606715 MSH4O15457 936 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 ASS1P00966 412 aaKnown RBP11.54□□□□□ -0.56
SHANK2-219ENST00000606715 VIL1P09327 827 aaKnown RBP11.54□□□□□ -0.56
SHANK2-219ENST00000606715 FMO5P49326 533 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 EMBQ6PCB8 327 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 VMP1Q96GC9 406 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 DACH2Q96NX9 599 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 NT5C1AQ9BXI3 368 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 HMX1Q9NP08 348 aaPredicted RBP11.54□□□□□ -0.56
SHANK2-219ENST00000606715 FAM49BQ9NUQ9 324 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 CRLS1Q9UJA2 301 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 SLC39A10Q9ULF5 831 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 LRRIQ3A6PVS8 624 aaPredicted RBP11.54□□□□□ -0.56
SHANK2-219ENST00000606715 PDGFRAP16234 1089 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 NAMPTP43490 491 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 NCALDP61601 193 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 HERVK_113P62684 666 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 MED21Q13503 144 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 CTXN3Q4LDR2 81 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 ALS2CLQ60I27 953 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 ITIH5Q86UX2 942 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 PHACTR4Q8IZ21 702 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 PHF21AQ96BD5 680 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 AGAP3Q96P47 875 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 SH2D3AQ9BRG2 576 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 VTA1Q9NP79 307 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 FBXO28Q9NVF7 368 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 TRPM5Q9NZQ8 1165 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 SSU72P8A0A1W2PR75 194 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 MYMKA6NI61 221 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 FAM200BP0CF97 657 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 RPL10AP62906 217 aaKnown RBP11.54□□□□□ -0.56
SHANK2-219ENST00000606715 NOGQ13253 232 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 PREPLQ4J6C6 727 aaPredicted RBP11.54□□□□□ -0.56
SHANK2-219ENST00000606715 IFNLR1Q8IU57 520 aaPredicted RBP11.54□□□□□ -0.56
SHANK2-219ENST00000606715 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.54□□□□□ -0.56
SHANK2-219ENST00000606715 HPS5Q9UPZ3 1129 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.54□□□□□ -0.56
SHANK2-219ENST00000606715 SPTLC1O15269 473 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 PALMO75781 387 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 HSPA1AP0DMV8 641 aaKnown RBP11.54□□□□□ -0.56
SHANK2-219ENST00000606715 HSPA1BP0DMV9 641 aaKnown RBP11.54□□□□□ -0.56
SHANK2-219ENST00000606715 TYK2P29597 1187 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 GPS1Q13098 491 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 FLOT2Q14254 428 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 ZRANB3Q5FWF4 1079 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 C6orf118Q5T5N4 469 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 METTL7BQ6UX53 244 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 ATXN7L3BQ96GX2 97 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 CIPCQ9C0C6 399 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 GPRC5DQ9NZD1 345 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 KLK14Q9P0G3 267 aa11.54□□□□□ -0.56
SHANK2-219ENST00000606715 COL14A1Q05707 1796 aaKnown RBP11.53□□□□□ -0.56
SHANK2-219ENST00000606715 TBKBP1A7MCY6 615 aa11.53□□□□□ -0.56
SHANK2-219ENST00000606715 SYCE1LA8MT33 242 aa11.53□□□□□ -0.56
SHANK2-219ENST00000606715 B3GAT3O94766 335 aa11.53□□□□□ -0.56
SHANK2-219ENST00000606715 SNCBQ16143 134 aa11.53□□□□□ -0.56
SHANK2-219ENST00000606715 TRAPPC11Q7Z392 1133 aa11.53□□□□□ -0.56
SHANK2-219ENST00000606715 ATP11CQ8NB49 1132 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms