RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 GSCP56915 257 aaPredicted RBP21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 TGFB2P61812 414 aa21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 LMNB2Q03252 620 aa21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 CAPSQ13938 189 aa21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 ZBTB33Q86T24 672 aa21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 CAMKK2Q96RR4 588 aa21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 PAIP2Q9BPZ3 127 aaKnown RBP21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 IMPG2Q9BZV3 1241 aa21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 AS3MTQ9HBK9 375 aa21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 PRKAG3Q9UGI9 489 aa21.38■■□□□ 1.01
SHKBP1-225ENST00000600733 STAM2O75886 525 aa21.37■■□□□ 1.01
SHKBP1-225ENST00000600733 ABHD2P08910 425 aa21.37■■□□□ 1.01
SHKBP1-225ENST00000600733 TAC1P20366 129 aa21.37■■□□□ 1.01
SHKBP1-225ENST00000600733 MAP2K2P36507 400 aa21.37■■□□□ 1.01
SHKBP1-225ENST00000600733 WDR4P57081 412 aaKnown RBP21.37■■□□□ 1.01
SHKBP1-225ENST00000600733 CNTN2Q02246 1040 aa21.37■■□□□ 1.01
SHKBP1-225ENST00000600733 EAPPQ56P03 285 aaPredicted RBP21.37■■□□□ 1.01
SHKBP1-225ENST00000600733 WLSQ5T9L3 541 aa21.37■■□□□ 1.01
SHKBP1-225ENST00000600733 ZNF772Q68DY9 489 aaPredicted RBP21.37■■□□□ 1.01
SHKBP1-225ENST00000600733 DNAJC24Q6P3W2 148 aa21.37■■□□□ 1.01
SHKBP1-225ENST00000600733 DCUN1D2Q6PH85 259 aa21.37■■□□□ 1.01
SHKBP1-225ENST00000600733 SPOCD1Q6ZMY3 1216 aa21.37■■□□□ 1.01
SHKBP1-225ENST00000600733 ALLCQ8N6M5 410 aa21.37■■□□□ 1.01
SHKBP1-225ENST00000600733 UBR7Q8N806 425 aa21.37■■□□□ 1.01
SHKBP1-225ENST00000600733 MAGEC3Q8TD91 643 aa21.37■■□□□ 1.01
SHKBP1-225ENST00000600733 CFAP57Q96MR6 1250 aa21.37■■□□□ 1.01
SHKBP1-225ENST00000600733 NCAPGQ9BPX3 1015 aa21.37■■□□□ 1.01
SHKBP1-225ENST00000600733 MTMR12Q9C0I1 747 aa21.37■■□□□ 1.01
SHKBP1-225ENST00000600733 CFAP73A6NFT4 308 aa21.36■■□□□ 1.01
SHKBP1-225ENST00000600733 POC1B-GALNT4F8VUJ3 575 aa21.36■■□□□ 1.01
SHKBP1-225ENST00000600733 ATG7O95352 703 aa21.36■■□□□ 1.01
SHKBP1-225ENST00000600733 ASS1P00966 412 aaKnown RBP21.36■■□□□ 1.01
SHKBP1-225ENST00000600733 PSMC4P43686 418 aa21.36■■□□□ 1.01
SHKBP1-225ENST00000600733 MGAT5Q09328 741 aa21.36■■□□□ 1.01
SHKBP1-225ENST00000600733 FAM47EQ6ZV65 393 aa21.36■■□□□ 1.01
SHKBP1-225ENST00000600733 TBC1D31Q96DN5 1066 aa21.36■■□□□ 1.01
SHKBP1-225ENST00000600733 KIF9Q9HAQ2 790 aa21.36■■□□□ 1.01
SHKBP1-225ENST00000600733 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.36■■□□□ 1.01
SHKBP1-225ENST00000600733 ACTL7BQ9Y614 415 aa21.36■■□□□ 1.01
SHKBP1-225ENST00000600733 TCRBV5S1A1TA0A578 114 aa21.36■■□□□ 1.01
SHKBP1-225ENST00000600733 FAM47DPA6NHR8 397 aa21.36■■□□□ 1.01
SHKBP1-225ENST00000600733 PEX10O60683 326 aa21.36■■□□□ 1.01
SHKBP1-225ENST00000600733 MYL6P60660 151 aa21.36■■□□□ 1.01
SHKBP1-225ENST00000600733 BNIP1Q12981 228 aa21.36■■□□□ 1.01
SHKBP1-225ENST00000600733 CYP4A22Q5TCH4 519 aa21.36■■□□□ 1.01
SHKBP1-225ENST00000600733 PPP1R21Q6ZMI0 780 aa21.36■■□□□ 1.01
SHKBP1-225ENST00000600733 ANKRD35Q8N283 1001 aa21.36■■□□□ 1.01
SHKBP1-225ENST00000600733 KIF2BQ8N4N8 673 aa21.36■■□□□ 1.01
SHKBP1-225ENST00000600733 TMEM121Q9BTD3 319 aa21.36■■□□□ 1.01
SHKBP1-225ENST00000600733 NQO1P15559 274 aaKnown RBP21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 COPS2P61201 443 aa21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 MKRN3Q13064 507 aaKnown RBP21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 STXBP2Q15833 593 aa21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 WDR72Q3MJ13 1102 aa21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 DCAF15Q66K64 600 aa21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 TRABD2AQ86V40 505 aa21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 KCNN1Q92952 543 aa21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 MRRFQ96E11 262 aaKnown RBP21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 ADAM33Q9BZ11 813 aa21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 FOXP3Q9BZS1 431 aa21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 hCG_1818297A0A087WSY0 165 aa21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 LRRD1A4D1F6 860 aa21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 IGF2BP3O00425 579 aaKnown RBP eCLIP21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 CALB1P05937 261 aa21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 GMPSP49915 693 aaPredicted RBP21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 MTFR1Q15390 333 aa21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 GPAT2Q6NUI2 795 aa21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 PPP1R2P3Q6NXS1 205 aa21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 DRICH1Q6PGQ1 229 aaPredicted RBP21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 CATSPERGQ6ZRH7 1159 aa21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 BRSK2Q8IWQ3 736 aa21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 CCHCR1Q8TD31 782 aa21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 PCYT2Q99447 389 aa21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 TCHPQ9BT92 498 aa21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 RXFP1Q9HBX9 757 aa21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 CISHQ9NSE2 258 aa21.35■■□□□ 1.01
SHKBP1-225ENST00000600733 ATP2A1O14983 1001 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 ADCY3O60266 1144 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 IFNB1P01574 187 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 WEE2P0C1S8 567 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 PLCB3Q01970 1234 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 MCL1Q07820 350 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 OASLQ15646 514 aaKnown RBP21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 TFDP3Q5H9I0 405 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 SCARA5Q6ZMJ2 495 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 ZBED8Q8IZ13 594 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 RIBC1Q8N443 379 aaPredicted RBP21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 WDTC1Q8N5D0 677 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 GBP7Q8N8V2 638 aaPredicted RBP21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 GPATCH11Q8N954 259 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 SPOCK2Q92563 424 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 C12orf42Q96LP6 360 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 NIFKQ9BYG3 293 aaKnown RBP21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 VPS37BQ9H9H4 285 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 SAE1Q9UBE0 346 aaPredicted RBP21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 ZNF112Q9UJU3 913 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 TRIM33Q9UPN9 1127 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 SPDYE16A6NNV3 312 aaPredicted RBP21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 GOLGA8SH3BPF8 625 aa21.34■■□□□ 1.01
SHKBP1-225ENST00000600733 GOLGA8MH3BSY2 632 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms