RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 SOD2P04179 222 aa20.24■□□□□ 0.83
CCDC9-205ENST00000600117 PRKCSHP14314 528 aaPredicted RBP20.24■□□□□ 0.83
CCDC9-205ENST00000600117 ATICP31939 592 aa20.24■□□□□ 0.83
CCDC9-205ENST00000600117 SIGLEC14Q08ET2 396 aa20.24■□□□□ 0.83
CCDC9-205ENST00000600117 ELAVL2Q12926 359 aaKnown RBP20.24■□□□□ 0.83
CCDC9-205ENST00000600117 VWA3BQ502W6 1294 aa20.24■□□□□ 0.83
CCDC9-205ENST00000600117 GAS2L3Q86XJ1 694 aa20.24■□□□□ 0.83
CCDC9-205ENST00000600117 EFHBQ8N7U6 833 aa20.24■□□□□ 0.83
CCDC9-205ENST00000600117 FBXL13Q8NEE6 735 aa20.24■□□□□ 0.83
CCDC9-205ENST00000600117 ELMO3Q96BJ8 720 aa20.24■□□□□ 0.83
CCDC9-205ENST00000600117 SENP8Q96LD8 212 aa20.24■□□□□ 0.83
CCDC9-205ENST00000600117 ZBP1Q9H171 429 aa20.24■□□□□ 0.83
CCDC9-205ENST00000600117 NDST4Q9H3R1 872 aa20.24■□□□□ 0.83
CCDC9-205ENST00000600117 CHST7Q9NS84 486 aa20.24■□□□□ 0.83
CCDC9-205ENST00000600117 FAM86C1Q9NVL1 165 aa20.24■□□□□ 0.83
CCDC9-205ENST00000600117 GDAP2Q9NXN4 497 aa20.24■□□□□ 0.83
CCDC9-205ENST00000600117 CLEC1BQ9P126 229 aa20.24■□□□□ 0.83
CCDC9-205ENST00000600117 TSC2P49815 1807 aa20.23■□□□□ 0.83
CCDC9-205ENST00000600117 GVINP1Q7Z2Y8 2422 aa20.23■□□□□ 0.83
CCDC9-205ENST00000600117 ZNF292O60281 2723 aa20.23■□□□□ 0.83
CCDC9-205ENST00000600117 LRRC10BA6NIK2 292 aa20.23■□□□□ 0.83
CCDC9-205ENST00000600117 TRAPPC3O43617 180 aa20.23■□□□□ 0.83
CCDC9-205ENST00000600117 CSPG5O95196 566 aa20.23■□□□□ 0.83
CCDC9-205ENST00000600117 FGFR3P22607 806 aa20.23■□□□□ 0.83
CCDC9-205ENST00000600117 COPB1P53618 953 aaKnown RBP20.23■□□□□ 0.83
CCDC9-205ENST00000600117 ERVFC1P60507 584 aa20.23■□□□□ 0.83
CCDC9-205ENST00000600117 MYO1EQ12965 1108 aa20.23■□□□□ 0.83
CCDC9-205ENST00000600117 ZNF699Q32M78 642 aa20.23■□□□□ 0.83
CCDC9-205ENST00000600117 FAM171A1Q5VUB5 890 aa20.23■□□□□ 0.83
CCDC9-205ENST00000600117 VPS52Q8N1B4 723 aa20.23■□□□□ 0.83
CCDC9-205ENST00000600117 RNF214Q8ND24 703 aa20.23■□□□□ 0.83
CCDC9-205ENST00000600117 LMO3Q8TAP4 145 aa20.23■□□□□ 0.83
CCDC9-205ENST00000600117 TAF4BQ92750 862 aa20.23■□□□□ 0.83
CCDC9-205ENST00000600117 B3GALT6Q96L58 329 aa20.23■□□□□ 0.83
CCDC9-205ENST00000600117 PI4K2AQ9BTU6 479 aa20.23■□□□□ 0.83
CCDC9-205ENST00000600117 RAB20Q9NX57 234 aa20.23■□□□□ 0.83
CCDC9-205ENST00000600117 STK39Q9UEW8 545 aa20.23■□□□□ 0.83
CCDC9-205ENST00000600117 PUF60Q9UHX1 559 aaKnown RBP20.23■□□□□ 0.83
CCDC9-205ENST00000600117 PCDHB8Q9UN66 801 aa20.23■□□□□ 0.83
CCDC9-205ENST00000600117 R3HCC1Q9Y3T6 440 aaKnown RBP20.23■□□□□ 0.83
CCDC9-205ENST00000600117 PLXNA3P51805 1871 aa20.22■□□□□ 0.83
CCDC9-205ENST00000600117 FSCN2O14926 492 aa20.22■□□□□ 0.83
CCDC9-205ENST00000600117 CDK11BP21127 795 aaKnown RBP20.22■□□□□ 0.83
CCDC9-205ENST00000600117 TKTP29401 623 aaKnown RBP20.22■□□□□ 0.83
CCDC9-205ENST00000600117 SGSM1Q2NKQ1 1148 aa20.22■□□□□ 0.83
CCDC9-205ENST00000600117 DSTYKQ6XUX3 929 aa20.22■□□□□ 0.83
CCDC9-205ENST00000600117 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.22■□□□□ 0.83
CCDC9-205ENST00000600117 LIMS2Q7Z4I7 341 aa20.22■□□□□ 0.83
CCDC9-205ENST00000600117 ATOH1Q92858 354 aaPredicted RBP20.22■□□□□ 0.83
CCDC9-205ENST00000600117 ANP32EQ9BTT0 268 aa20.22■□□□□ 0.83
CCDC9-205ENST00000600117 VPS16Q9H269 839 aa20.22■□□□□ 0.83
CCDC9-205ENST00000600117 APOBEC3GQ9HC16 384 aaKnown RBP20.22■□□□□ 0.83
CCDC9-205ENST00000600117 GTPBP10A4D1E9 387 aaKnown RBP20.21■□□□□ 0.83
CCDC9-205ENST00000600117 GOLGA6L19H0YKK7 550 aa20.21■□□□□ 0.83
CCDC9-205ENST00000600117 CYB561D2O14569 222 aa20.21■□□□□ 0.83
CCDC9-205ENST00000600117 SYN3O14994 580 aa20.21■□□□□ 0.83
CCDC9-205ENST00000600117 CYP11A1P05108 521 aa20.21■□□□□ 0.83
CCDC9-205ENST00000600117 CTSAP10619 480 aa20.21■□□□□ 0.83
CCDC9-205ENST00000600117 VCPP55072 806 aaKnown RBP20.21■□□□□ 0.83
CCDC9-205ENST00000600117 DSG1Q02413 1049 aa20.21■□□□□ 0.83
CCDC9-205ENST00000600117 USP41Q3LFD5 358 aa20.21■□□□□ 0.83
CCDC9-205ENST00000600117 RTP2Q5QGT7 225 aa20.21■□□□□ 0.83
CCDC9-205ENST00000600117 KIAA0319Q5VV43 1072 aa20.21■□□□□ 0.83
CCDC9-205ENST00000600117 SPOPLQ6IQ16 392 aa20.21■□□□□ 0.83
CCDC9-205ENST00000600117 ANKRD20A12PQ8NF67 263 aa20.21■□□□□ 0.83
CCDC9-205ENST00000600117 ASIC4Q96FT7 647 aa20.21■□□□□ 0.83
CCDC9-205ENST00000600117 TTPALQ9BTX7 342 aa20.21■□□□□ 0.83
CCDC9-205ENST00000600117 PHF7Q9BWX1 381 aaPredicted RBP20.21■□□□□ 0.83
CCDC9-205ENST00000600117 TLR9Q9NR96 1032 aa20.21■□□□□ 0.83
CCDC9-205ENST00000600117 POLIQ9UNA4 740 aa20.21■□□□□ 0.83
CCDC9-205ENST00000600117 USP15Q9Y4E8 981 aaPredicted RBP20.21■□□□□ 0.83
CCDC9-205ENST00000600117 SNX9Q9Y5X1 595 aa20.21■□□□□ 0.83
CCDC9-205ENST00000600117 LILRB3O75022 631 aa20.2■□□□□ 0.82
CCDC9-205ENST00000600117 TYMPP19971 482 aa20.2■□□□□ 0.82
CCDC9-205ENST00000600117 AVPR2P30518 371 aa20.2■□□□□ 0.82
CCDC9-205ENST00000600117 GLUD2P49448 558 aa20.2■□□□□ 0.82
CCDC9-205ENST00000600117 TPM4P67936 248 aa20.2■□□□□ 0.82
CCDC9-205ENST00000600117 NOP14P78316 857 aaKnown RBP20.2■□□□□ 0.82
CCDC9-205ENST00000600117 WDR72Q3MJ13 1102 aa20.2■□□□□ 0.82
CCDC9-205ENST00000600117 ZNF667Q5HYK9 610 aa20.2■□□□□ 0.82
CCDC9-205ENST00000600117 ADGRD2Q7Z7M1 963 aa20.2■□□□□ 0.82
CCDC9-205ENST00000600117 EHBP1Q8NDI1 1231 aa20.2■□□□□ 0.82
CCDC9-205ENST00000600117 PIK3R5Q8WYR1 880 aa20.2■□□□□ 0.82
CCDC9-205ENST00000600117 TCF25Q9BQ70 676 aa20.2■□□□□ 0.82
CCDC9-205ENST00000600117 RBSNQ9H1K0 784 aa20.2■□□□□ 0.82
CCDC9-205ENST00000600117 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.2■□□□□ 0.826e-6■■■■■ 48.1
CCDC9-205ENST00000600117 L1RE1Q9UN81 338 aa20.2■□□□□ 0.82
CCDC9-205ENST00000600117 PCDHGC5Q9Y5F6 944 aa20.2■□□□□ 0.82
CCDC9-205ENST00000600117 TIMM13Q9Y5L4 95 aaPredicted RBP20.2■□□□□ 0.82
CCDC9-205ENST00000600117 LGALS16A8MUM7 142 aa20.19■□□□□ 0.82
CCDC9-205ENST00000600117 ODC1P11926 461 aa20.19■□□□□ 0.82
CCDC9-205ENST00000600117 MRPL58Q14197 206 aaKnown RBP20.19■□□□□ 0.82
CCDC9-205ENST00000600117 PTPN14Q15678 1187 aa20.19■□□□□ 0.82
CCDC9-205ENST00000600117 SOWAHAQ2M3V2 549 aa20.19■□□□□ 0.82
CCDC9-205ENST00000600117 VARS2Q5ST30 1063 aaKnown RBP20.19■□□□□ 0.82
CCDC9-205ENST00000600117 WSCD1Q658N2 575 aa20.19■□□□□ 0.82
CCDC9-205ENST00000600117 TMC7Q7Z402 723 aa20.19■□□□□ 0.82
CCDC9-205ENST00000600117 CEP57Q86XR8 500 aa20.19■□□□□ 0.82
CCDC9-205ENST00000600117 GPR65Q8IYL9 337 aa20.19■□□□□ 0.82
CCDC9-205ENST00000600117 TOP6BLQ8N6T0 577 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms