RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 CYP3A7P24462 503 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 SULT1E1P49888 294 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 GPC5P78333 572 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 LRRC41Q15345 812 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 MTFR1Q15390 333 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 LONRF2Q1L5Z9 754 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 DARS2Q6PI48 645 aaKnown RBP6.63□□□□□ -1.35
SMAD4-212ENST00000591126 LRRC49Q8IUZ0 686 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 HDDC3Q8N4P3 179 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 LRRC52Q8N7C0 313 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 WFIKKN2Q8TEU8 576 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 SH3KBP1Q96B97 665 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 TIFAQ96CG3 184 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 MSANTD3Q96H12 275 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 CRYBG1Q9Y4K1 1723 aa6.63□□□□□ -1.35
SMAD4-212ENST00000591126 ASMTLO95671 621 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 LSM8O95777 96 aaKnown RBP6.62□□□□□ -1.35
SMAD4-212ENST00000591126 ENPEPQ07075 957 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 TGM3Q08188 693 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 ZNF284Q2VY69 593 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 KLHL35Q6PF15 583 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 MOB2Q70IA6 237 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 C12orf50Q8NA57 414 aaPredicted RBP6.62□□□□□ -1.35
SMAD4-212ENST00000591126 CALML6Q8TD86 181 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 INTS2Q9H0H0 1204 aaKnown RBP6.62□□□□□ -1.35
SMAD4-212ENST00000591126 RBSNQ9H1K0 784 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 ST3GAL5Q9UNP4 418 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 HCN4Q9Y3Q4 1203 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 HYOU1Q9Y4L1 999 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 MEI4A8MW99 385 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 LZTS3O60299 673 aaPredicted RBP6.62□□□□□ -1.35
SMAD4-212ENST00000591126 HNRNPA1P09651 372 aaKnown RBP eCLIP6.62□□□□□ -1.35
SMAD4-212ENST00000591126 TYMPP19971 482 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 TAC1P20366 129 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 DEKP35659 375 aaKnown RBP6.62□□□□□ -1.35
SMAD4-212ENST00000591126 GRM5P41594 1212 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 PLA2G4AP47712 749 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 CNTN2Q02246 1040 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 CAV1Q03135 178 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 BST2Q10589 180 aaKnown RBP6.62□□□□□ -1.35
SMAD4-212ENST00000591126 DPYDQ12882 1025 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 NAA25Q14CX7 972 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 SEC23AQ15436 765 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 BOLA3Q53S33 107 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 HECTD3Q5T447 861 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 IL31Q6EBC2 164 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 C1orf131Q8NDD1 294 aaKnown RBP6.62□□□□□ -1.35
SMAD4-212ENST00000591126 IFT81Q8WYA0 676 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 PBXIP1Q96AQ6 731 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 PPP1R13BQ96KQ4 1090 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 FRMD8Q9BZ67 464 aaPredicted RBP6.62□□□□□ -1.35
SMAD4-212ENST00000591126 KLHL8Q9P2G9 620 aaPredicted RBP6.62□□□□□ -1.35
SMAD4-212ENST00000591126 I3L4J1 428 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 TIMM44O43615 452 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 ALADP13716 330 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 ATF2P15336 505 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 RWDD2BP57060 319 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 PDK1Q15118 436 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 TTC39BQ5VTQ0 682 aaPredicted RBP6.62□□□□□ -1.35
SMAD4-212ENST00000591126 C11orf57Q6ZUT1 292 aaPredicted RBP6.62□□□□□ -1.35
SMAD4-212ENST00000591126 ATPAF2Q8N5M1 289 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 TOP6BLQ8N6T0 577 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 CEP120Q8N960 986 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 DDI1Q8WTU0 396 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 ARNTL2Q8WYA1 636 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 FAM129AQ9BZQ8 928 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 SYNDIG1Q9H7V2 258 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 UVRAGQ9P2Y5 699 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 TLK1Q9UKI8 766 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 HPS5Q9UPZ3 1129 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 C4BP0C0L5 1744 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 QSOX1O00391 747 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 CEP104O60308 925 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 VTNP04004 478 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 MAP4P27816 1152 aaKnown RBP6.62□□□□□ -1.35
SMAD4-212ENST00000591126 ATP5C1P36542 298 aaKnown RBP6.62□□□□□ -1.35
SMAD4-212ENST00000591126 RESTQ13127 1097 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 SYTL3Q4VX76 610 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 FAM102AQ5T9C2 384 aaPredicted RBP6.62□□□□□ -1.35
SMAD4-212ENST00000591126 FYB2Q5VWT5 728 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 UGT3A1Q6NUS8 523 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 RGL4Q8IZJ4 473 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 ATRIPQ8WXE1 791 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 PCDHA5Q9Y5H7 936 aa6.62□□□□□ -1.35
SMAD4-212ENST00000591126 CPP00450 1065 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 ASS1P00966 412 aaKnown RBP6.61□□□□□ -1.35
SMAD4-212ENST00000591126 APOA4P06727 396 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 PAEPP09466 180 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 CNPP09543 421 aaKnown RBP6.61□□□□□ -1.35
SMAD4-212ENST00000591126 FGRP09769 529 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 DARSP14868 501 aaKnown RBP6.61□□□□□ -1.35
SMAD4-212ENST00000591126 HTR1BP28222 390 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 RPIAP49247 311 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 TOB2Q14106 344 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-212ENST00000591126 PDGFRLQ15198 375 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 TTLL9Q3SXZ7 439 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 C17orf99Q6UX52 265 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 LINC00523Q86TU6 105 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 ABHD8Q96I13 439 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 TARS2Q9BW92 718 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms