RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 H7C4K7 107 aa18.27■□□□□ 0.51
RPRD1A-209ENST00000590898 GABRDO14764 452 aa18.27■□□□□ 0.51
RPRD1A-209ENST00000590898 LPXNO60711 386 aa18.27■□□□□ 0.51
RPRD1A-209ENST00000590898 TPM3P06753 285 aa18.27■□□□□ 0.51
RPRD1A-209ENST00000590898 ASPAP45381 313 aa18.27■□□□□ 0.51
RPRD1A-209ENST00000590898 ERVFC1P60507 584 aa18.27■□□□□ 0.51
RPRD1A-209ENST00000590898 GCNT1Q02742 428 aa18.27■□□□□ 0.51
RPRD1A-209ENST00000590898 PTPROQ16827 1216 aa18.27■□□□□ 0.51
RPRD1A-209ENST00000590898 RTP2Q5QGT7 225 aa18.27■□□□□ 0.51
RPRD1A-209ENST00000590898 VARS2Q5ST30 1063 aaKnown RBP18.27■□□□□ 0.51
RPRD1A-209ENST00000590898 WSCD1Q658N2 575 aa18.27■□□□□ 0.51
RPRD1A-209ENST00000590898 LNX1Q8TBB1 728 aaPredicted RBP18.27■□□□□ 0.51
RPRD1A-209ENST00000590898 JAKMIP2Q96AA8 810 aa18.27■□□□□ 0.51
RPRD1A-209ENST00000590898 PLCB1Q9NQ66 1216 aa18.27■□□□□ 0.51
RPRD1A-209ENST00000590898 APEX2Q9UBZ4 518 aa18.27■□□□□ 0.51
RPRD1A-209ENST00000590898 A0A1W2PQC6 194 aa18.26■□□□□ 0.51
RPRD1A-209ENST00000590898 FSCN2O14926 492 aa18.26■□□□□ 0.51
RPRD1A-209ENST00000590898 TEX33O43247 280 aa18.26■□□□□ 0.51
RPRD1A-209ENST00000590898 CBFA2T2O43439 604 aa18.26■□□□□ 0.51
RPRD1A-209ENST00000590898 CLSTN1O94985 981 aa18.26■□□□□ 0.51
RPRD1A-209ENST00000590898 CXCL14O95715 111 aa18.26■□□□□ 0.51
RPRD1A-209ENST00000590898 POU3F3P20264 500 aaPredicted RBP18.26■□□□□ 0.51
RPRD1A-209ENST00000590898 CREMQ03060 361 aa18.26■□□□□ 0.51
RPRD1A-209ENST00000590898 SMC1AQ14683 1233 aaKnown RBP18.26■□□□□ 0.51
RPRD1A-209ENST00000590898 OVOS1Q6IE37 1185 aa18.26■□□□□ 0.51
RPRD1A-209ENST00000590898 ENOSF1Q7L5Y1 443 aa18.26■□□□□ 0.51
RPRD1A-209ENST00000590898 MRPL43Q8N983 215 aaKnown RBP18.26■□□□□ 0.51
RPRD1A-209ENST00000590898 RIN2Q8WYP3 895 aaPredicted RBP18.26■□□□□ 0.51
RPRD1A-209ENST00000590898 MRPL38Q96DV4 380 aaKnown RBP18.26■□□□□ 0.51
RPRD1A-209ENST00000590898 TCF25Q9BQ70 676 aa18.26■□□□□ 0.51
RPRD1A-209ENST00000590898 RXFP1Q9HBX9 757 aa18.26■□□□□ 0.51
RPRD1A-209ENST00000590898 FNIP2Q9P278 1114 aa18.26■□□□□ 0.51
RPRD1A-209ENST00000590898 POLIQ9UNA4 740 aa18.26■□□□□ 0.51
RPRD1A-209ENST00000590898 SIK3Q9Y2K2 1263 aa18.26■□□□□ 0.51
RPRD1A-209ENST00000590898 DAAM1Q9Y4D1 1078 aa18.26■□□□□ 0.51
RPRD1A-209ENST00000590898 BACE2Q9Y5Z0 518 aa18.26■□□□□ 0.51
RPRD1A-209ENST00000590898 TSC2P49815 1807 aa18.26■□□□□ 0.51
RPRD1A-209ENST00000590898 TBC1D4O60343 1298 aa18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 WARSP23381 471 aaKnown RBP18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 CUL2Q13617 745 aa18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 GRIN2CQ14957 1233 aa18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 PHLDB3Q6NSJ2 640 aa18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 DPY19L2P1Q6NXN4 242 aa18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 VSTM4Q8IW00 320 aa18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 ADGRF2Q8IZF7 708 aa18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 THEM5Q8N1Q8 247 aa18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 GDPD5Q8WTR4 605 aa18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 ENTPD7Q9NQZ7 604 aa18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 TIMM13Q9Y5L4 95 aaPredicted RBP18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 PRRC2BQ5JSZ5 2229 aaKnown RBP18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 RFX1P22670 979 aa18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 SYCP1Q15431 976 aa18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 PTPN14Q15678 1187 aa18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 ZNF280DQ6N043 979 aa18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 PPM1KQ8N3J5 372 aa18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 MICAL1Q8TDZ2 1067 aa18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 KBTBD7Q8WVZ9 684 aa18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 ELMO3Q96BJ8 720 aa18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 B3GALT6Q96L58 329 aa18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 SIX2Q9NPC8 291 aa18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 MTRRQ9UBK8 725 aa18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 FBXL5Q9UKA1 691 aa18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 ATG2AQ2TAZ0 1938 aa18.25■□□□□ 0.51
RPRD1A-209ENST00000590898 RFXAPO00287 272 aa18.24■□□□□ 0.51
RPRD1A-209ENST00000590898 GNL1P36915 607 aaPredicted RBP18.24■□□□□ 0.51
RPRD1A-209ENST00000590898 COL4A4P53420 1690 aaPredicted RBP18.24■□□□□ 0.51
RPRD1A-209ENST00000590898 YWHAEP62258 255 aaKnown RBP18.24■□□□□ 0.51
RPRD1A-209ENST00000590898 PSMD5Q16401 504 aa18.24■□□□□ 0.51
RPRD1A-209ENST00000590898 KLHDC7AQ5VTJ3 777 aa18.24■□□□□ 0.51
RPRD1A-209ENST00000590898 UNC93AQ86WB7 457 aa18.24■□□□□ 0.51
RPRD1A-209ENST00000590898 ACBD6Q9BR61 282 aa18.24■□□□□ 0.51
RPRD1A-209ENST00000590898 UBE2TQ9NPD8 197 aaPredicted RBP18.24■□□□□ 0.51
RPRD1A-209ENST00000590898 PYCARDQ9ULZ3 195 aa18.24■□□□□ 0.51
RPRD1A-209ENST00000590898 OR6C75A6NL08 312 aa18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 WEE2P0C1S8 567 aa18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 MSNP26038 577 aaKnown RBP18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 CDH8P55286 799 aa18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 GOLGA8FQ08AF8 430 aa18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 GOLGA8DPQ0D2H9 430 aa18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 INCA1Q0VD86 236 aa18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 C17orf53Q8N3J3 647 aaPredicted RBP18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 MRPL45Q9BRJ2 306 aaKnown RBP18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 PRDM12Q9H4Q4 367 aa18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 SMYD3Q9H7B4 428 aa18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 BARX2Q9UMQ3 279 aaPredicted RBP18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 STXBP5LQ9Y2K9 1186 aa18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 MTCL1Q9Y4B5 1905 aaKnown RBP18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 C2orf71A6NGG8 1288 aa18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 C2CD2LO14523 706 aa18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 C1RP00736 705 aa18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 PCSK1P29120 753 aa18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 MFAP3P55082 362 aa18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 CTXN3Q4LDR2 81 aa18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 SLC8B1Q6J4K2 584 aa18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 PRSS55Q6UWB4 352 aaPredicted RBP18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 ARHGEF19Q8IW93 802 aa18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 EMILIN2Q9BXX0 1053 aa18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 SDCBP2Q9H190 292 aa18.23■□□□□ 0.51
RPRD1A-209ENST00000590898 SNX25Q9H3E2 840 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms