RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 CCNA1P78396 465 aa20.29■□□□□ 0.84
PRKCSH-209ENST00000589838 SNAPC2Q13487 334 aa20.29■□□□□ 0.84
PRKCSH-209ENST00000589838 DPY19L2Q6NUT2 758 aa20.29■□□□□ 0.84
PRKCSH-209ENST00000589838 TRAPPC12Q8WVT3 735 aa20.29■□□□□ 0.84
PRKCSH-209ENST00000589838 HERPUD2Q9BSE4 406 aa20.29■□□□□ 0.84
PRKCSH-209ENST00000589838 FOXP3Q9BZS1 431 aa20.29■□□□□ 0.84
PRKCSH-209ENST00000589838 XYLT2Q9H1B5 865 aa20.29■□□□□ 0.84
PRKCSH-209ENST00000589838 CDT1Q9H211 546 aa20.29■□□□□ 0.84
PRKCSH-209ENST00000589838 LHX5Q9H2C1 402 aa20.29■□□□□ 0.84
PRKCSH-209ENST00000589838 RASSF4Q9H2L5 321 aa20.29■□□□□ 0.84
PRKCSH-209ENST00000589838 EVPLQ92817 2033 aa20.29■□□□□ 0.84
PRKCSH-209ENST00000589838 TCRBV5S1A1TA0A578 114 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 WEE2P0C1S8 567 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 IVDP26440 423 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 GJC1P36383 396 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 MAGEA9P43362 315 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 ASPAP45381 313 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 CLCN3P51790 818 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 ZNF667Q5HYK9 610 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 ZFYVE27Q5T4F4 411 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 C10orf67Q8IYJ2 551 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 NIPA2Q8N8Q9 360 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 R3HDM2Q9Y2K5 976 aaKnown RBP20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 KIAA0754O94854 1291 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 C22orf31O95567 290 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 MCF2P10911 925 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 TMOD1P28289 359 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 ITGA8P53708 1063 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 SEC24CP53992 1094 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 RPL7AP62424 266 aaKnown RBP20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 ZNF394Q53GI3 561 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 EEF1DP3Q658K8 133 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 SCARA3Q6AZY7 606 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 MFSD5Q6N075 450 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 DRICH1Q6PGQ1 229 aaPredicted RBP20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 ARMCX2Q7L311 632 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 TAOK1Q7L7X3 1001 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 MCEEQ96PE7 176 aa20.28■□□□□ 0.84
PRKCSH-209ENST00000589838 A0A087WUV0 522 aaPredicted RBP20.27■□□□□ 0.84
PRKCSH-209ENST00000589838 DCDC2CA8MYV0 355 aa20.27■□□□□ 0.84
PRKCSH-209ENST00000589838 NDC80O14777 642 aa20.27■□□□□ 0.84
PRKCSH-209ENST00000589838 GH1P01241 217 aa20.27■□□□□ 0.84
PRKCSH-209ENST00000589838 KRT1P04264 644 aa20.27■□□□□ 0.84
PRKCSH-209ENST00000589838 ATP5DP30049 168 aa20.27■□□□□ 0.84
PRKCSH-209ENST00000589838 PTPN7P35236 360 aa20.27■□□□□ 0.84
PRKCSH-209ENST00000589838 OSTNP61366 133 aa20.27■□□□□ 0.84
PRKCSH-209ENST00000589838 DAB2IPQ5VWQ8 1189 aa20.27■□□□□ 0.84
PRKCSH-209ENST00000589838 SCARA5Q6ZMJ2 495 aa20.27■□□□□ 0.84
PRKCSH-209ENST00000589838 IFNLR1Q8IU57 520 aaPredicted RBP20.27■□□□□ 0.84
PRKCSH-209ENST00000589838 SLITRK1Q96PX8 696 aa20.27■□□□□ 0.84
PRKCSH-209ENST00000589838 CDC42EP4Q9H3Q1 356 aaKnown RBP20.27■□□□□ 0.84
PRKCSH-209ENST00000589838 SPON1Q9HCB6 807 aa20.27■□□□□ 0.84
PRKCSH-209ENST00000589838 VTA1Q9NP79 307 aa20.27■□□□□ 0.84
PRKCSH-209ENST00000589838 PDGFCQ9NRA1 345 aa20.27■□□□□ 0.84
PRKCSH-209ENST00000589838 NEU2Q9Y3R4 380 aa20.27■□□□□ 0.84
PRKCSH-209ENST00000589838 ZSWIM8A7E2V4 1837 aa20.27■□□□□ 0.83
PRKCSH-209ENST00000589838 COL1A2P08123 1366 aa20.27■□□□□ 0.83
PRKCSH-209ENST00000589838 O00370 1275 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 B4GALT5O43286 388 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 KRT19P08727 400 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 ATICP31939 592 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 MMP13P45452 471 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 PPP1R15BQ5SWA1 713 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 GSTA5Q7RTV2 222 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 RAPGEF5Q92565 580 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 SERPINB12Q96P63 405 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 BCO2Q9BYV7 579 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 RNPEPQ9H4A4 650 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 ASB7Q9H672 318 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 WDR35Q9P2L0 1181 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 NXF1Q9UBU9 619 aaKnown RBP20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 GJB6O95452 261 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 CXCL8P10145 99 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 P4HA1P13674 534 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 INSRRP14616 1297 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 CD19P15391 556 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 ARHGAP1Q07960 439 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 TRIP13Q15645 432 aaPredicted RBP20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 WDTC1Q8N5D0 677 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 GPRC5AQ8NFJ5 357 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 PPM1EQ8WY54 764 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 TFAP2BQ92481 460 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 CYP3A43Q9HB55 503 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 LRRC4CQ9HCJ2 640 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 AAASQ9NRG9 546 aa20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 DRG1Q9Y295 367 aaKnown RBP20.26■□□□□ 0.83
PRKCSH-209ENST00000589838 TP73O15350 636 aa20.25■□□□□ 0.83
PRKCSH-209ENST00000589838 TTC4O95801 387 aa20.25■□□□□ 0.83
PRKCSH-209ENST00000589838 LGALS2P05162 132 aa20.25■□□□□ 0.83
PRKCSH-209ENST00000589838 GJB1P08034 283 aa20.25■□□□□ 0.83
PRKCSH-209ENST00000589838 STAG3L1P0CL83 205 aa20.25■□□□□ 0.83
PRKCSH-209ENST00000589838 TNFAIP8L3Q5GJ75 292 aa20.25■□□□□ 0.83
PRKCSH-209ENST00000589838 ERMARDQ5T6L9 678 aa20.25■□□□□ 0.83
PRKCSH-209ENST00000589838 C9orf131Q5VYM1 1079 aa20.25■□□□□ 0.83
PRKCSH-209ENST00000589838 SPOCD1Q6ZMY3 1216 aa20.25■□□□□ 0.83
PRKCSH-209ENST00000589838 POLNQ7Z5Q5 900 aa20.25■□□□□ 0.83
PRKCSH-209ENST00000589838 YTHDF3Q7Z739 585 aaKnown RBP20.25■□□□□ 0.83
PRKCSH-209ENST00000589838 L3MBTL3Q96JM7 780 aaPredicted RBP20.25■□□□□ 0.83
PRKCSH-209ENST00000589838 XPO6Q96QU8 1125 aaKnown RBP20.25■□□□□ 0.83
PRKCSH-209ENST00000589838 MINDY3Q9H8M7 445 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms