RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 CPB2Q96IY4 423 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 RUFY1Q96T51 708 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 C11orf70Q9BRQ4 267 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 LRRC19Q9H756 370 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 PSD3Q9NYI0 1048 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 NXF1Q9UBU9 619 aaKnown RBP11.03□□□□□ -0.64
VPS25-203ENST00000589520 UBQLN1Q9UMX0 589 aaKnown RBP11.03□□□□□ -0.64
VPS25-203ENST00000589520 AGAP1Q9UPQ3 857 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 UMODL1Q5DID0 1318 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 PASKQ96RG2 1323 aa11.03□□□□□ -0.64
VPS25-203ENST00000589520 GOLGA6BA6NDN3 693 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 TMEM191CA6NGB0 347 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 GOLGA8KD6RF30 607 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 NDC80O14777 642 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 CILPO75339 1184 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 MYL3P08590 195 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 WEE2P0C1S8 567 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 PYGMP11217 842 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 CD58P19256 250 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 HOXA11P31270 313 aaPredicted RBP11.02□□□□□ -0.65
VPS25-203ENST00000589520 HOXC8P31273 242 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 PNPLA4P41247 253 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 CARSP49589 748 aaKnown RBP11.02□□□□□ -0.65
VPS25-203ENST00000589520 GJA9P57773 515 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 PTPN11Q06124 597 aaPredicted RBP11.02□□□□□ -0.65
VPS25-203ENST00000589520 INCA1Q0VD86 236 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 FSCN1Q16658 493 aaKnown RBP11.02□□□□□ -0.65
VPS25-203ENST00000589520 PRAMEF19Q5SWL8 479 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 CFAP58Q5T655 872 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 DNAJC24Q6P3W2 148 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 DCUN1D2Q6PH85 259 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 LRIG3Q6UXM1 1119 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 MMS22LQ6ZRQ5 1243 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 RSPH3Q86UC2 560 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 UNC93AQ86WB7 457 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 KATNAL2Q8IYT4 538 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 C7orf31Q8N865 590 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 NIPA2Q8N8Q9 360 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 EXD1Q8NHP7 514 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 GRK7Q8WTQ7 553 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 CASKIN2Q8WXE0 1202 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 KRT35Q92764 455 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 MAGOHBQ96A72 148 aaKnown RBP11.02□□□□□ -0.65
VPS25-203ENST00000589520 KIF12Q96FN5 646 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 RBM41Q96IZ5 413 aaKnown RBP11.02□□□□□ -0.65
VPS25-203ENST00000589520 ZNF668Q96K58 619 aaPredicted RBP11.02□□□□□ -0.65
VPS25-203ENST00000589520 NCAPGQ9BPX3 1015 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 ERP44Q9BS26 406 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 MTG1Q9BT17 334 aaPredicted RBP11.02□□□□□ -0.65
VPS25-203ENST00000589520 TRIM6Q9C030 488 aaPredicted RBP11.02□□□□□ -0.65
VPS25-203ENST00000589520 DDX47Q9H0S4 455 aaKnown RBP11.02□□□□□ -0.65
VPS25-203ENST00000589520 DDX56Q9NY93 547 aaKnown RBP11.02□□□□□ -0.65
VPS25-203ENST00000589520 FLRT1Q9NZU1 646 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 AMACRQ9UHK6 382 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 NFU1Q9UMS0 254 aa11.02□□□□□ -0.65
VPS25-203ENST00000589520 MCM3APO60318 1980 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 TCRBV5S1A1TA0A578 114 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 SIGLEC16A6NMB1 481 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 M0QZ92 97 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 ATMINO43313 823 aaPredicted RBP11.01□□□□□ -0.65
VPS25-203ENST00000589520 NPTXRO95502 500 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 SETSIPP0DME0 302 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 MYBL2P10244 700 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 ITGA4P13612 1032 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 CD19P15391 556 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 CYP2C19P33261 490 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 COILP38432 576 aaPredicted RBP11.01□□□□□ -0.65
VPS25-203ENST00000589520 HSPA9P38646 679 aaKnown RBP11.01□□□□□ -0.65
VPS25-203ENST00000589520 GABRB2P47870 512 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 RAD23BP54727 409 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 LMNB2Q03252 620 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 HLTFQ14527 1009 aaKnown RBP eCLIP11.01□□□□□ -0.65
VPS25-203ENST00000589520 TERF2Q15554 542 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 ZBTB6Q15916 424 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 KIZQ2M2Z5 673 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 SGO2Q562F6 1265 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 ALKAL1Q6UXT8 129 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 CROCCP2Q86T23 111 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 CDR2LQ86X02 465 aaPredicted RBP11.01□□□□□ -0.65
VPS25-203ENST00000589520 TMEM192Q8IY95 271 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 HACE1Q8IYU2 909 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 EXOC4Q96A65 974 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 ELMO3Q96BJ8 720 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 C18orf8Q96DM3 657 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 ZBTB10Q96DT7 871 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 FAM84AQ96KN4 292 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 SNX27Q96L92 541 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 NT5C1AQ9BXI3 368 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 FAM49AQ9H0Q0 323 aaPredicted RBP11.01□□□□□ -0.65
VPS25-203ENST00000589520 TSPYL1Q9H0U9 437 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 CHST12Q9NRB3 414 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 CNTN3Q9P232 1028 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 EFR3BQ9Y2G0 817 aa11.01□□□□□ -0.65
VPS25-203ENST00000589520 FAM155AB1AL88 458 aaPredicted RBP11□□□□□ -0.65
VPS25-203ENST00000589520 ADCY6O43306 1168 aa11□□□□□ -0.65
VPS25-203ENST00000589520 KCNE1P15382 129 aa11□□□□□ -0.65
VPS25-203ENST00000589520 DESP17661 470 aa11□□□□□ -0.65
VPS25-203ENST00000589520 BRD2P25440 801 aaKnown RBP11□□□□□ -0.65
VPS25-203ENST00000589520 PTPN7P35236 360 aa11□□□□□ -0.65
VPS25-203ENST00000589520 PURAQ00577 322 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms