RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 GABRDO14764 452 aa17■□□□□ 0.31
CSNK1D-212ENST00000580061 CD58P19256 250 aa17■□□□□ 0.31
CSNK1D-212ENST00000580061 ACO1P21399 889 aaKnown RBP17■□□□□ 0.31
CSNK1D-212ENST00000580061 YWHAHQ04917 246 aaPredicted RBP17■□□□□ 0.31
CSNK1D-212ENST00000580061 INCA1Q0VD86 236 aa17■□□□□ 0.31
CSNK1D-212ENST00000580061 GPM6BQ13491 265 aa17■□□□□ 0.31
CSNK1D-212ENST00000580061 MRPL58Q14197 206 aaKnown RBP17■□□□□ 0.31
CSNK1D-212ENST00000580061 ARHGAP44Q17R89 818 aa17■□□□□ 0.31
CSNK1D-212ENST00000580061 VARS2Q5ST30 1063 aaKnown RBP17■□□□□ 0.31
CSNK1D-212ENST00000580061 METTL23Q86XA0 190 aa17■□□□□ 0.31
CSNK1D-212ENST00000580061 VPS52Q8N1B4 723 aa17■□□□□ 0.31
CSNK1D-212ENST00000580061 TTC39CQ8N584 583 aa17■□□□□ 0.31
CSNK1D-212ENST00000580061 POF1BQ8WVV4 589 aa17■□□□□ 0.31
CSNK1D-212ENST00000580061 ARNTL2Q8WYA1 636 aa17■□□□□ 0.31
CSNK1D-212ENST00000580061 STK33Q9BYT3 514 aa17■□□□□ 0.31
CSNK1D-212ENST00000580061 GPR88Q9GZN0 384 aa17■□□□□ 0.31
CSNK1D-212ENST00000580061 ZBP1Q9H171 429 aa17■□□□□ 0.31
CSNK1D-212ENST00000580061 NLRC4Q9NPP4 1024 aa17■□□□□ 0.31
CSNK1D-212ENST00000580061 PUF60Q9UHX1 559 aaKnown RBP17■□□□□ 0.31
CSNK1D-212ENST00000580061 NME7Q9Y5B8 376 aa17■□□□□ 0.31
CSNK1D-212ENST00000580061 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17■□□□□ 0.319e-8■□□□□ 9.5
CSNK1D-212ENST00000580061 TRIOBPQ9H2D6 2365 aa17■□□□□ 0.31
CSNK1D-212ENST00000580061 CILPO75339 1184 aa16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 OAZ2O95190 189 aa16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 CTSAP10619 480 aa16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 DNAJB1P25685 340 aa16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 CDC25BP30305 580 aa16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 LHX1P48742 406 aa16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 GLUD2P49448 558 aa16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 YWHAEP62258 255 aaKnown RBP16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 DSG1Q02413 1049 aa16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 RAPGEF1Q13905 1077 aa16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 DRAP1Q14919 205 aaPredicted RBP16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 KIAA0319Q5VV43 1072 aa16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 OVOS1Q6IE37 1185 aa16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 CACNA2D4Q7Z3S7 1137 aa16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 TMC6Q7Z403 805 aa16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 OR6B3Q8NGW1 331 aa16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 LNX1Q8TBB1 728 aaPredicted RBP16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 PIK3R5Q8WYR1 880 aa16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 SHC3Q92529 594 aa16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 IQCDQ96DY2 449 aa16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 RTP3Q9BQQ7 232 aa16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 EDEM3Q9BZQ6 932 aa16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 DDX43Q9NXZ2 648 aaKnown RBP16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 BARX2Q9UMQ3 279 aaPredicted RBP16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 STXBP5LQ9Y2K9 1186 aa16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 CDH23Q9H251 3354 aa16.99■□□□□ 0.31
CSNK1D-212ENST00000580061 A0A1W2PQJ5 194 aa16.98■□□□□ 0.31
CSNK1D-212ENST00000580061 GRM6O15303 877 aa16.98■□□□□ 0.31
CSNK1D-212ENST00000580061 GYPCP04921 128 aa16.98■□□□□ 0.31
CSNK1D-212ENST00000580061 URODP06132 367 aa16.98■□□□□ 0.31
CSNK1D-212ENST00000580061 LMO2P25791 158 aa16.98■□□□□ 0.31
CSNK1D-212ENST00000580061 GNL1P36915 607 aaPredicted RBP16.98■□□□□ 0.31
CSNK1D-212ENST00000580061 NDST1P52848 882 aa16.98■□□□□ 0.31
CSNK1D-212ENST00000580061 JAM2P57087 298 aa16.98■□□□□ 0.31
CSNK1D-212ENST00000580061 ERVFC1P60507 584 aa16.98■□□□□ 0.31
CSNK1D-212ENST00000580061 SMYD5Q6GMV2 418 aa16.98■□□□□ 0.31
CSNK1D-212ENST00000580061 KIAA1841Q6NSI8 718 aa16.98■□□□□ 0.31
CSNK1D-212ENST00000580061 ANKS3Q6ZW76 656 aa16.98■□□□□ 0.31
CSNK1D-212ENST00000580061 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.98■□□□□ 0.31
CSNK1D-212ENST00000580061 UNC93AQ86WB7 457 aa16.98■□□□□ 0.31
CSNK1D-212ENST00000580061 GPR65Q8IYL9 337 aa16.98■□□□□ 0.31
CSNK1D-212ENST00000580061 THEM5Q8N1Q8 247 aa16.98■□□□□ 0.31
CSNK1D-212ENST00000580061 WHAMMQ8TF30 809 aa16.98■□□□□ 0.31
CSNK1D-212ENST00000580061 RIN2Q8WYP3 895 aaPredicted RBP16.98■□□□□ 0.31
CSNK1D-212ENST00000580061 BAP1Q92560 729 aa16.98■□□□□ 0.31
CSNK1D-212ENST00000580061 SNX25Q9H3E2 840 aa16.98■□□□□ 0.31
CSNK1D-212ENST00000580061 HMGXB4Q9UGU5 601 aa16.98■□□□□ 0.31
CSNK1D-212ENST00000580061 CNTN6Q9UQ52 1028 aa16.98■□□□□ 0.31
CSNK1D-212ENST00000580061 PCDHB4Q9Y5E5 795 aa16.98■□□□□ 0.31
CSNK1D-212ENST00000580061 TMEM265A0A087WTH1 108 aa16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 EPOPA6NHQ4 379 aa16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 A8MXQ7 604 aa16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 F8VZ95 297 aa16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 RNF225M0QZC1 329 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 FOXN3O00409 490 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 HCRTO43612 131 aa16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 TBC1D4O60343 1298 aa16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 LILRB3O75022 631 aa16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 TBX2Q13207 712 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 CAMK1Q14012 370 aa16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 TRIM14Q14142 442 aa16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 ZNF280DQ6N043 979 aa16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 PDXDC1Q6P996 788 aa16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 TMEM270Q6UE05 265 aa16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 PRSS55Q6UWB4 352 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 SPAG5Q96R06 1193 aa16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 TWNKQ96RR1 684 aa16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 TCF25Q9BQ70 676 aa16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 ACBD6Q9BR61 282 aa16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 ZNF576Q9H609 170 aa16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 TLR9Q9NR96 1032 aa16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 MRPL17Q9NRX2 175 aaKnown RBP16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 MTRRQ9UBK8 725 aa16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 CAPN11Q9UMQ6 739 aa16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 SSX2IPQ9Y2D8 614 aa16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 BACE2Q9Y5Z0 518 aa16.97■□□□□ 0.31
CSNK1D-212ENST00000580061 TRANK1O15050 2925 aa16.96■□□□□ 0.31
CSNK1D-212ENST00000580061 H7C4K7 107 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms