RNA–Protein interactions for RNA: ENST00000570021.1

SIN3A-213, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 3

Gene SIN3A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-213ENST00000570021 FLT1P17948 1338 aa5.87□□□□□ -1.47
SIN3A-213ENST00000570021 COL4A6Q14031 1691 aa5.87□□□□□ -1.47
SIN3A-213ENST00000570021 ZNF236Q9UL36 1845 aa5.87□□□□□ -1.47
SIN3A-213ENST00000570021 CACNA1BQ00975 2339 aa5.86□□□□□ -1.47
SIN3A-213ENST00000570021 ROBO3Q96MS0 1386 aa5.86□□□□□ -1.47
SIN3A-213ENST00000570021 ASTN1O14525 1302 aa5.86□□□□□ -1.47
SIN3A-213ENST00000570021 MROH7Q68CQ1 1323 aa5.86□□□□□ -1.47
SIN3A-213ENST00000570021 FANCIQ9NVI1 1328 aa5.86□□□□□ -1.47
SIN3A-213ENST00000570021 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.86□□□□□ -1.47
SIN3A-213ENST00000570021 MED19A0JLT2 244 aaPredicted RBP5.86□□□□□ -1.47
SIN3A-213ENST00000570021 DUSP11O75319 330 aaKnown RBP5.86□□□□□ -1.47
SIN3A-213ENST00000570021 C6orf222P0C671 652 aaPredicted RBP5.86□□□□□ -1.47
SIN3A-213ENST00000570021 GNAT1P11488 350 aa5.86□□□□□ -1.47
SIN3A-213ENST00000570021 FCER1AP12319 257 aa5.86□□□□□ -1.47
SIN3A-213ENST00000570021 ETV4P43268 484 aa5.86□□□□□ -1.47
SIN3A-213ENST00000570021 USP14P54578 494 aa5.86□□□□□ -1.47
SIN3A-213ENST00000570021 PSMC6P62333 389 aa5.86□□□□□ -1.47
SIN3A-213ENST00000570021 MAP4K2Q12851 820 aa5.86□□□□□ -1.47
SIN3A-213ENST00000570021 FOXL1Q12952 345 aa5.86□□□□□ -1.47
SIN3A-213ENST00000570021 TMEM63BQ5T3F8 832 aa5.86□□□□□ -1.47
SIN3A-213ENST00000570021 SPTY2D1Q68D10 685 aaPredicted RBP5.86□□□□□ -1.47
SIN3A-213ENST00000570021 CXCL17Q6UXB2 119 aa5.86□□□□□ -1.47
SIN3A-213ENST00000570021 MICAL1Q8TDZ2 1067 aa5.86□□□□□ -1.47
SIN3A-213ENST00000570021 KCTD13Q8WZ19 329 aa5.86□□□□□ -1.47
SIN3A-213ENST00000570021 VOPP1Q96AW1 172 aa5.86□□□□□ -1.47
SIN3A-213ENST00000570021 FEZ1Q99689 392 aa5.86□□□□□ -1.47
SIN3A-213ENST00000570021 UPF3AQ9H1J1 476 aaKnown RBP5.86□□□□□ -1.47
SIN3A-213ENST00000570021 MROH8Q9H579 483 aa5.86□□□□□ -1.47
SIN3A-213ENST00000570021 SLC5A4Q9NY91 659 aa5.86□□□□□ -1.47
SIN3A-213ENST00000570021 PUF60Q9UHX1 559 aaKnown RBP5.86□□□□□ -1.47
SIN3A-213ENST00000570021 MTUS1Q9ULD2 1270 aa5.86□□□□□ -1.47
SIN3A-213ENST00000570021 FAM184BQ9ULE4 1060 aa5.86□□□□□ -1.47
SIN3A-213ENST00000570021 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.86□□□□□ -1.47
SIN3A-213ENST00000570021 PDS5AQ29RF7 1337 aaKnown RBP5.85□□□□□ -1.47
SIN3A-213ENST00000570021 ARHGAP6O43182 974 aa5.85□□□□□ -1.47
SIN3A-213ENST00000570021 RAMP2O60895 175 aa5.85□□□□□ -1.47
SIN3A-213ENST00000570021 MAP4K4O95819 1239 aaPredicted RBP5.85□□□□□ -1.47
SIN3A-213ENST00000570021 CAPNS1P04632 268 aa5.85□□□□□ -1.47
SIN3A-213ENST00000570021 LDHCP07864 332 aa5.85□□□□□ -1.47
SIN3A-213ENST00000570021 CYP2C9P11712 490 aa5.85□□□□□ -1.47
SIN3A-213ENST00000570021 COL6A2P12110 1019 aa5.85□□□□□ -1.47
SIN3A-213ENST00000570021 GRK2P25098 689 aa5.85□□□□□ -1.47
SIN3A-213ENST00000570021 MSX2P35548 267 aaPredicted RBP5.85□□□□□ -1.47
SIN3A-213ENST00000570021 GRK3P35626 688 aa5.85□□□□□ -1.47
SIN3A-213ENST00000570021 ID4P47928 161 aa5.85□□□□□ -1.47
SIN3A-213ENST00000570021 EPHA5P54756 1037 aa5.85□□□□□ -1.47
SIN3A-213ENST00000570021 VCPP55072 806 aaKnown RBP5.85□□□□□ -1.47
SIN3A-213ENST00000570021 ITGA7Q13683 1181 aa5.85□□□□□ -1.47
SIN3A-213ENST00000570021 SEPT2Q15019 361 aa5.85□□□□□ -1.47
SIN3A-213ENST00000570021 TCTN1Q2MV58 587 aa5.85□□□□□ -1.47
SIN3A-213ENST00000570021 HERC6Q8IVU3 1022 aa5.85□□□□□ -1.47
SIN3A-213ENST00000570021 RPUSD2Q8IZ73 545 aaKnown RBP5.85□□□□□ -1.47
SIN3A-213ENST00000570021 ATOH1Q92858 354 aaPredicted RBP5.85□□□□□ -1.47
SIN3A-213ENST00000570021 CLIP3Q96DZ5 547 aa5.85□□□□□ -1.47
SIN3A-213ENST00000570021 PHF20Q9BVI0 1012 aa5.85□□□□□ -1.47
SIN3A-213ENST00000570021 TANGO6Q9C0B7 1094 aa5.85□□□□□ -1.47
SIN3A-213ENST00000570021 PLA2G3Q9NZ20 509 aa5.85□□□□□ -1.47
SIN3A-213ENST00000570021 RAI14Q9P0K7 980 aa5.85□□□□□ -1.47
SIN3A-213ENST00000570021 ZHX1Q9UKY1 873 aaPredicted RBP5.85□□□□□ -1.47
SIN3A-213ENST00000570021 DSEQ9UL01 958 aa5.85□□□□□ -1.47
SIN3A-213ENST00000570021 REXO2Q9Y3B8 237 aaKnown RBP5.85□□□□□ -1.47
SIN3A-213ENST00000570021 SCN5AQ14524 2016 aa5.85□□□□□ -1.47
SIN3A-213ENST00000570021 PLXNA3P51805 1871 aa5.85□□□□□ -1.47
SIN3A-213ENST00000570021 COL4A4P53420 1690 aaPredicted RBP5.85□□□□□ -1.47
SIN3A-213ENST00000570021 CDK5RAP2Q96SN8 1893 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 A0A1B0GUL7 405 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 B2RBV5 119 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 ACOT7O00154 380 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 NKRFO15226 690 aaKnown RBP eCLIP5.84□□□□□ -1.47
SIN3A-213ENST00000570021 CIAO1O76071 339 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 SHMT1P34896 483 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 MCAMP43121 646 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 PLCD1P51178 756 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 GSTO1P78417 241 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 HHEXQ03014 270 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 ACVR2BQ13705 512 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 GPNMBQ14956 572 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 ABCB5Q2M3G0 1257 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 CCDC144BQ3MJ40 725 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 CERKLQ49MI3 558 aaPredicted RBP5.84□□□□□ -1.47
SIN3A-213ENST00000570021 HERC4Q5GLZ8 1057 aaPredicted RBP5.84□□□□□ -1.47
SIN3A-213ENST00000570021 RSPO2Q6UXX9 243 aaPredicted RBP5.84□□□□□ -1.47
SIN3A-213ENST00000570021 KCTD1Q719H9 257 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 BMP8AQ7Z5Y6 402 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 SPICE1Q8N0Z3 855 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 SPATA5Q8NB90 893 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 PCSK9Q8NBP7 692 aaKnown RBP5.84□□□□□ -1.47
SIN3A-213ENST00000570021 REPS2Q8NFH8 660 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 PHOSPHO2Q8TCD6 241 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 SLC39A2Q9NP94 309 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 TRMT13Q9NUP7 481 aaKnown RBP5.84□□□□□ -1.47
SIN3A-213ENST00000570021 FBXO28Q9NVF7 368 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 CEP72Q9P209 647 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 ADAMTS5Q9UNA0 930 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 CNPY2Q9Y2B0 182 aa5.84□□□□□ -1.47
SIN3A-213ENST00000570021 DDX49Q9Y6V7 483 aaKnown RBP5.84□□□□□ -1.47
SIN3A-213ENST00000570021 CACNA1HO95180 2353 aa5.84□□□□□ -1.48
SIN3A-213ENST00000570021 PTPRSQ13332 1948 aa5.84□□□□□ -1.48
SIN3A-213ENST00000570021 TET1Q8NFU7 2136 aa5.83□□□□□ -1.48
SIN3A-213ENST00000570021 PRR23AA6NEV1 266 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms