RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 UROC1Q96N76 676 aa6.9□□□□□ -1.3
VPS29-210ENST00000552130 IPPKQ9H8X2 491 aa6.9□□□□□ -1.3
VPS29-210ENST00000552130 EIF2B3Q9NR50 452 aaKnown RBP6.9□□□□□ -1.3
VPS29-210ENST00000552130 SIRT5Q9NXA8 310 aa6.9□□□□□ -1.3
VPS29-210ENST00000552130 USP36Q9P275 1121 aaKnown RBP6.9□□□□□ -1.3
VPS29-210ENST00000552130 CPSF2Q9P2I0 782 aaKnown RBP6.9□□□□□ -1.3
VPS29-210ENST00000552130 FBXL5Q9UKA1 691 aa6.9□□□□□ -1.3
VPS29-210ENST00000552130 CBLCQ9ULV8 474 aa6.9□□□□□ -1.3
VPS29-210ENST00000552130 DUSP12Q9UNI6 340 aa6.9□□□□□ -1.3
VPS29-210ENST00000552130 CNPY2Q9Y2B0 182 aa6.9□□□□□ -1.3
VPS29-210ENST00000552130 TMEM5Q9Y2B1 443 aa6.9□□□□□ -1.3
VPS29-210ENST00000552130 NT5C1B-RDH14C9J2C7 533 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 MYO1FO00160 1098 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 STXBP3O00186 592 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 ELL2O00472 640 aaPredicted RBP6.89□□□□□ -1.31
VPS29-210ENST00000552130 DVL2O14641 736 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 IPO8O15397 1037 aaKnown RBP6.89□□□□□ -1.31
VPS29-210ENST00000552130 ERAL1O75616 437 aaKnown RBP6.89□□□□□ -1.31
VPS29-210ENST00000552130 FAM155BO75949 473 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 FTLP02792 175 aaPredicted RBP6.89□□□□□ -1.31
VPS29-210ENST00000552130 THBDP07204 575 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 HNRNPA1P09651 372 aaKnown RBP eCLIP6.89□□□□□ -1.31
VPS29-210ENST00000552130 EEF2P13639 858 aaKnown RBP6.89□□□□□ -1.31
VPS29-210ENST00000552130 JUPP14923 745 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 BRAFP15056 766 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 PNLIPP16233 465 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 SLC7A1P30825 629 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 LTBRP36941 435 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 CDR1P51861 262 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 BCAR1P56945 870 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 NLRP5P59047 1200 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 ERVFRD-1P60508 538 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 MRPS9P82933 396 aaKnown RBP6.89□□□□□ -1.31
VPS29-210ENST00000552130 CHRNDQ07001 517 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 BFSP1Q12934 665 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 MRPL28Q13084 256 aaKnown RBP6.89□□□□□ -1.31
VPS29-210ENST00000552130 CHAF1BQ13112 559 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 SNAPC2Q13487 334 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 FGL2Q14314 439 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 CRY1Q16526 586 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 DPY19L1Q2PZI1 675 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 C3orf36Q3SXR2 165 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 VWA3BQ502W6 1294 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 FAM129CQ86XR2 697 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 KCTD6Q8NC69 237 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 NPLOC4Q8TAT6 608 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 OTUD7AQ8TE49 926 aaPredicted RBP6.89□□□□□ -1.31
VPS29-210ENST00000552130 KIF1BPQ96EK5 621 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 MSLNLQ96KJ4 702 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 CCDC43Q96MW1 224 aaKnown RBP6.89□□□□□ -1.31
VPS29-210ENST00000552130 TEPSINQ96N21 525 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 FNBP1Q96RU3 617 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 HGH1Q9BTY7 390 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 GPR63Q9BZJ6 419 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 SYNCQ9H7C4 482 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 TM7SF3Q9NS93 570 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 CATSPERZQ9NTU4 200 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 MSRAQ9UJ68 235 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 FBXL21Q9UKT6 434 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 PCDHB12Q9Y5F1 795 aa6.89□□□□□ -1.31
VPS29-210ENST00000552130 EPN1Q9Y6I3 576 aaPredicted RBP6.89□□□□□ -1.31
VPS29-210ENST00000552130 A0A1W2PPL8 197 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 TMEM82A0PJX8 343 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 UBE2CO00762 179 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 GJB3O75712 270 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 TSPAN9O75954 239 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 PGM3O95394 542 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 TNFRSF6BO95407 300 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 A1BGP04217 495 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 CLEC2LP0C7M8 214 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 NR2F1P10589 423 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 PAMP19021 973 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 HSPA4P34932 840 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 NNMTP40261 264 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 MLH1P40692 756 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 KIF11P52732 1056 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 SH3BGRP55822 239 aaPredicted RBP6.88□□□□□ -1.31
VPS29-210ENST00000552130 RBP5P82980 135 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 LACTBP83111 547 aaPredicted RBP6.88□□□□□ -1.31
VPS29-210ENST00000552130 CREB5Q02930 508 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 EFEMP1Q12805 493 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 COX10Q12887 443 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 KCNB1Q14721 858 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 TESK1Q15569 626 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 WSCD2Q2TBF2 565 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 MUM1L1Q5H9M0 696 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 CYP4F22Q6NT55 531 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 ESRP1Q6NXG1 681 aaKnown RBP6.88□□□□□ -1.31
VPS29-210ENST00000552130 BTNL9Q6UXG8 535 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 CCBE1Q6UXH8 406 aaPredicted RBP6.88□□□□□ -1.31
VPS29-210ENST00000552130 SLFN11Q7Z7L1 901 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 CXorf67Q86X51 503 aaPredicted RBP6.88□□□□□ -1.31
VPS29-210ENST00000552130 SP8Q8IXZ3 490 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 ZZZ3Q8IYH5 903 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 DAGLBQ8NCG7 672 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 GDAP1Q8TB36 358 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 AFG1LQ8WV93 481 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 CALML4Q96GE6 196 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 HHIPL1Q96JK4 782 aa6.88□□□□□ -1.31
VPS29-210ENST00000552130 FEM1CQ96JP0 617 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms