RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 ERVK-19Q9WJR5 959 aa6.9□□□□□ -1.3
SDC2-208ENST00000523877 PMF1-BGLAPU3KQ54 211 aa6.9□□□□□ -1.3
SDC2-208ENST00000523877 TTC21AQ8NDW8 1320 aa6.9□□□□□ -1.3
SDC2-208ENST00000523877 ANKRD30AQ9BXX3 1397 aa6.9□□□□□ -1.31
SDC2-208ENST00000523877 IQSEC2Q5JU85 1478 aa6.9□□□□□ -1.31
SDC2-208ENST00000523877 ADAMTSL3P82987 1691 aa6.9□□□□□ -1.31
SDC2-208ENST00000523877 PNMA6FA0A0J9YX94 578 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 NCF1BA6NI72 391 aaPredicted RBP6.89□□□□□ -1.31
SDC2-208ENST00000523877 NCF1CA8MVU1 366 aaPredicted RBP6.89□□□□□ -1.31
SDC2-208ENST00000523877 HIP1O00291 1037 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 SCAMP1O15126 338 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 ZBTB24O43167 697 aaPredicted RBP6.89□□□□□ -1.31
SDC2-208ENST00000523877 KRT86O43790 486 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 MGRN1O60291 552 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 GRIN3BO60391 1043 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 SOAT2O75908 522 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 PIAS2O75928 621 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 GAS8O95995 478 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 CHRNB1P11230 501 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 CPA3P15088 417 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 ANPEPP15144 967 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 VCLP18206 1134 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 FUT4P22083 530 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 PSMA2P25787 234 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 LRPAP1P30533 357 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 BMI1P35226 326 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 ETV5P41161 510 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 LIG3P49916 1009 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 ST5P78524 1137 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 PTPN12Q05209 780 aaKnown RBP6.89□□□□□ -1.31
SDC2-208ENST00000523877 CDK18Q07002 472 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 ENPEPQ07075 957 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 C19orf57Q0VDD7 668 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 DRP2Q13474 957 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 RAPSNQ13702 412 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 ADRM1Q16186 407 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 SWI5Q1ZZU3 235 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 KLHL40Q2TBA0 621 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 SLC39A12Q504Y0 691 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 CRTC2Q53ET0 693 aaPredicted RBP6.89□□□□□ -1.31
SDC2-208ENST00000523877 SGO2Q562F6 1265 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 HSP90AA4PQ58FG1 418 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 FAM47CQ5HY64 1035 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 AKAP4Q5JQC9 854 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 SHEQ5VZ18 495 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 FBXO38Q6PIJ6 1188 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 LRIG3Q6UXM1 1119 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 MACC1Q6ZN28 852 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 NLRC3Q7RTR2 1065 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 NECAB2Q7Z6G3 386 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 ZNF677Q86XU0 584 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 REXO1L1PQ8IX06 675 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 NIM1KQ8IY84 436 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 PCYOX1LQ8NBM8 494 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 TTLQ8NG68 377 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 TTLL11Q8NHH1 800 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 HUS1BQ8NHY5 278 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 ANGPTL6Q8NI99 470 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 SPPL3Q8TCT6 385 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 SLC7A3Q8WY07 619 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 RFKQ969G6 155 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 KIFC2Q96AC6 838 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 TMEM68Q96MH6 324 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 TRIM2Q9C040 744 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 KCNK13Q9HB14 408 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 SPON1Q9HCB6 807 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 INIPQ9NRY2 104 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 KLC4Q9NSK0 619 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 DDX28Q9NUL7 540 aaKnown RBP6.89□□□□□ -1.31
SDC2-208ENST00000523877 HACD3Q9P035 362 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 JAG2Q9Y219 1238 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 DERAQ9Y315 318 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 COMMD3-BMI1R4GMX3 469 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 FLT1P17948 1338 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 KIF24Q5T7B8 1368 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 ABCC11Q96J66 1382 aa6.89□□□□□ -1.31
SDC2-208ENST00000523877 KTN1Q86UP2 1357 aaKnown RBP6.88□□□□□ -1.31
SDC2-208ENST00000523877 ATP8B3O60423 1300 aa6.88□□□□□ -1.31
SDC2-208ENST00000523877 A0A087WZG4 1122 aa6.88□□□□□ -1.31
SDC2-208ENST00000523877 A0A087X0B3 334 aa6.88□□□□□ -1.31
SDC2-208ENST00000523877 RCCD1A6NED2 376 aa6.88□□□□□ -1.31
SDC2-208ENST00000523877 FAM177BA6PVY3 158 aa6.88□□□□□ -1.31
SDC2-208ENST00000523877 FAM47E-STBD1D6RA91 191 aa6.88□□□□□ -1.31
SDC2-208ENST00000523877 MATN2O00339 956 aa6.88□□□□□ -1.31
SDC2-208ENST00000523877 TRAF5O00463 557 aa6.88□□□□□ -1.31
SDC2-208ENST00000523877 WNT7AO00755 349 aa6.88□□□□□ -1.31
SDC2-208ENST00000523877 GATCO43716 136 aaKnown RBP6.88□□□□□ -1.31
SDC2-208ENST00000523877 STX10O60499 249 aa6.88□□□□□ -1.31
SDC2-208ENST00000523877 GREM1O60565 184 aa6.88□□□□□ -1.31
SDC2-208ENST00000523877 EFCAB14O75071 495 aa6.88□□□□□ -1.31
SDC2-208ENST00000523877 HRGP04196 525 aa6.88□□□□□ -1.31
SDC2-208ENST00000523877 CHGBP05060 677 aa6.88□□□□□ -1.31
SDC2-208ENST00000523877 URODP06132 367 aa6.88□□□□□ -1.31
SDC2-208ENST00000523877 GLAP06280 429 aa6.88□□□□□ -1.31
SDC2-208ENST00000523877 ASNSP08243 561 aa6.88□□□□□ -1.31
SDC2-208ENST00000523877 SNRPAP09012 282 aaKnown RBP6.88□□□□□ -1.31
SDC2-208ENST00000523877 GSTA2P09210 222 aa6.88□□□□□ -1.31
SDC2-208ENST00000523877 QDPRP09417 244 aa6.88□□□□□ -1.31
SDC2-208ENST00000523877 PAMP19021 973 aa6.88□□□□□ -1.31
SDC2-208ENST00000523877 POLR2CP19387 275 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms